CAS: Molecular Discovery
| Title | CAS: Molecular Discovery |
|---|---|
| Type | Research cluster |
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Unexpected hemiterpenoids in Arabidopsis, revealed by metabolomic fingerprinting, give new insights into C/N metabolic balancing
C2 - Non-edited contributions to conferences
Ward, J. L., Baker, J. M., Llewellyn, A. M., Hawkins, N. D. and Beale, M. H. 2012. Unexpected hemiterpenoids in Arabidopsis, revealed by metabolomic fingerprinting, give new insights into C/N metabolic balancing. Taylor & Francis.
Effects of genotype and environment on the contents of betaine, choline and trigonelline in cereal grains
A - Papers appearing in refereed journals
Corol, D. I., Ravel, C., Raksegi, M., Bedo, Z., Charmet, G., Beale, M. H., Shewry, P. R. and Ward, J. L. 2012. Effects of genotype and environment on the contents of betaine, choline and trigonelline in cereal grains. Journal of Agricultural and Food Chemistry - JAFC. 60, pp. 5471-5481. https://doi.org/10.1021/jf3008794
Realising the potential of plant metabolomics
C2 - Non-edited contributions to conferences
Beale, M. H. and Ward, J. L. 2012. Realising the potential of plant metabolomics.
Exploiting genetic variation to improve wheat composition for the prevention of chronic diseases
A - Papers appearing in refereed journals
Shewry, P. R. and Ward, J. L. 2012. Exploiting genetic variation to improve wheat composition for the prevention of chronic diseases. Food and Energy Security. 1, pp. 47-60. https://doi.org/10.1002/fes3.2
An integrated study of grain development of wheat (cv. Hereward)
A - Papers appearing in refereed journals
Shewry, P. R., Mitchell, R. A. C., Tosi, P., Wan, Y., Toscano-Underwood, C., Lovegrove, A., Freeman, J., Toole, G. A., Mills, E. N. C. and Ward, J. L. 2012. An integrated study of grain development of wheat (cv. Hereward). Journal of Cereal Science. 56, pp. 21-30. https://doi.org/10.1016/j.jcs.2011.11.007
Developing new types of wheat with enhanced health benefits
A - Papers appearing in refereed journals
Shewry, P. R., Charmet, G., Branlard, G., Lafiandra, D., Gergely, S., Salgo, A., Saulnier, L., Bedo, Z., Mills, E. N. C. and Ward, J. L. 2012. Developing new types of wheat with enhanced health benefits. Trends In Food Science & Technology. 25 (2), pp. 70-77. https://doi.org/10.1016/j.tifs.2012.01.003
2-Carboxy-D-arabinitol 1-phosphate (CA1P) phosphatase: evidence for a wider role in plant Rubisco regulation
A - Papers appearing in refereed journals
Andralojc, P. J., Madgwick, P. J., Tao, Y., Keys, A. J., Ward, J. L., Beale, M. H., Loveland, J. E., Jackson, P. J., Willis, A. C., Gutteridge, S. and Parry, M. A. J. 2012. 2-Carboxy-D-arabinitol 1-phosphate (CA1P) phosphatase: evidence for a wider role in plant Rubisco regulation. Biochemical Journal. 442 (3), pp. 733-742. https://doi.org/10.1042/BJ20111443
Tissue preparation using Arabidopsis
B - Book chapters etc edited externally
Llewellyn, A. M., Lewis, J., Miller, S. J., Corol, D. I., Beale, M. H. and Ward, J. L. 2012. Tissue preparation using Arabidopsis. in: Hall, R. D. and Hardy, N. W. (ed.) Plant metabolomics: methods and protocols (Methods in Molecular Biology, vol. 860 Springer, New York. pp. 65-81
Combined NMR and flow injection ESI-MS for Brassicaceae metabolomics
B - Book chapters etc edited externally
Baker, J. M., Ward, J. L. and Beale, M. H. 2012. Combined NMR and flow injection ESI-MS for Brassicaceae metabolomics. in: Hall, R. D. and Hardy, N. W. (ed.) Plant metabolomics: methods and protocols (Methods in Molecular Biology, vol. 860) Springer, New York. pp. 177-191
A dual-targeted purple acid phosphatase in Arabidopsis thaliana moderates carbon metabolism and its overexpression leads to faster plant growth and higher seed yield
A - Papers appearing in refereed journals
Sun, F., Suen, P. K., Zhang, Y., Liang, C., Carrie, C., Whelan, J., Ward, J. L., Hawkins, N. D., Jiang, L. and Lim, B. L. 2012. A dual-targeted purple acid phosphatase in Arabidopsis thaliana moderates carbon metabolism and its overexpression leads to faster plant growth and higher seed yield. New Phytologist. 194 (1), pp. 206-219. https://doi.org/10.1111/j.1469-8137.2011.04026.x
Methylated arsenic species in plants originate from soil microorganisms
A - Papers appearing in refereed journals
Lomax, C., Liu, W-J., Wu, Liyou, Xue, K., Xiong, J., Zhou, J., McGrath, S. P., Meharg, A. A., Miller, A. J. and Zhao, F-J. 2012. Methylated arsenic species in plants originate from soil microorganisms. New Phytologist. 193 (3), pp. 665-672. https://doi.org/10.1111/j.1469-8137.2011.03956.x
Health Grain: increasing the health benefits of wheat
C1 - Edited contributions to conferences/learned societies
Jones, H. D., Gebruers, K., Ward, J. L. and Shewry, P. R. 2011. Health Grain: increasing the health benefits of wheat. Chibbar, R. N. and Dexter, J. E. (ed.) Wheat Science Dynamics: Challenges and Opportunities. Proceedings International Wheat Quality Conference IV, Saskatoon, 2-6 June 2009 . Agrobios International, Jodhpur. pp. 419-429
The genetics and biochemistry of wheat grain colour
C2 - Non-edited contributions to conferences
Vaughan, S. P., Baker, J., Ward, J. L., Huttly, A. K. and Phillips, A. L. 2011. The genetics and biochemistry of wheat grain colour. ABRATES.
The effects of a plant defence priming compound, beta-aminobutyric acid, on multitrophic interactions with an insect herbivore and a hymenopterous parasitoid
A - Papers appearing in refereed journals
Hodge, S., Ward, J. L., Galster, A. M., Beale, M. H. and Powell, G. 2011. The effects of a plant defence priming compound, beta-aminobutyric acid, on multitrophic interactions with an insect herbivore and a hymenopterous parasitoid. BioControl. 56, pp. 699-711. https://doi.org/10.1007/s10526-011-9344-z
Genotype and environment effects on the contents of vitamins B1, B2, B3 and B6 in wheat grain
A - Papers appearing in refereed journals
Shewry, P. R., Van Schaik, F., Ravel, C., Charmet, G., Rakszegi, M., Bedo, Z. and Ward, J. L. 2011. Genotype and environment effects on the contents of vitamins B1, B2, B3 and B6 in wheat grain. Journal of Agricultural and Food Chemistry - JAFC. 59, pp. 10564-10571. https://doi.org/10.1021/jf202762b
Improving the health benefits of wheat
C1 - Edited contributions to conferences/learned societies
Shewry, P. R., Ward, J. L., Zhao, F-J., Ravel, C., Charmet, G., Lafiandra, D. and Bedo, Z. 2011. Improving the health benefits of wheat. Czech Academy Agricultural Sciences.
Postprandial glycemia, insulinemia and satiety responses in healthy subjects after whole grain rye bread made from different rye varieties. 1
A - Papers appearing in refereed journals
Rosen, L. A. H., Ostman, E. M., Shewry, P. R., Ward, J. L., Andersson, A. A. M., Piironen, V., Lampi, A-M., Rakszegi, M., Bedo, Z. and Bjorck, I. M. E. 2011. Postprandial glycemia, insulinemia and satiety responses in healthy subjects after whole grain rye bread made from different rye varieties. 1. Journal of Agricultural and Food Chemistry - JAFC. 59, pp. 12139-12148. https://doi.org/10.1021/jf2019825
Metabolomic analysis of Arabidopsis reveals hemiterpenoid glycosides as products of a nitrate ion-regulated, carbon flux overflow
A - Papers appearing in refereed journals
Ward, J. L., Baker, J. M., Llewellyn, A. M., Hawkins, N. D. and Beale, M. H. 2011. Metabolomic analysis of Arabidopsis reveals hemiterpenoid glycosides as products of a nitrate ion-regulated, carbon flux overflow. Proceedings of the National Academy of Sciences. 108, pp. 10762-10767. https://doi.org/10.1073/pnas.1018875108
13C metabolic flux analysis identifies an unusual route for pyruvate dissimilation in mycobacteria which requires isocitrate lyase and carbon dioxide fixation
A - Papers appearing in refereed journals
Beste, D. J. V., Bonde, B., Hawkins, N. D., Ward, J. L., Beale, M. H., Noack, S., Noh, K., Kruger, N. J., Ratcliffe, R. G. and Mcfadden, J. 2011. 13C metabolic flux analysis identifies an unusual route for pyruvate dissimilation in mycobacteria which requires isocitrate lyase and carbon dioxide fixation. PLOS Pathogens. 7, p. e1002091 (18pp). https://doi.org/10.1371/journal.ppat.1002091
Metabolomics of Arabidopsis thaliana
B - Book chapters etc edited externally
Beale, M. H. and Sussman, M. R. 2011. Metabolomics of Arabidopsis thaliana. in: Hall, R. D. (ed.) Biology of plant metabolomics (Annual Plant Reviews Vol. 43) Wiley-Blackwell Chichester, Sussex. pp. 157-180
Relationship between the contents of bioactive components in grain and the release dates of wheat lines in the HEALTHGRAIN diversity screen
A - Papers appearing in refereed journals
Shewry, P. R., Gebruers, K., Andersson, A. A. M., Aman, P., Piironen, V., Lampi, A-M., Boros, D., Rakszegi, M., Bedo, Z. and Ward, J. L. 2011. Relationship between the contents of bioactive components in grain and the release dates of wheat lines in the HEALTHGRAIN diversity screen. Journal of Agricultural and Food Chemistry - JAFC. 59, pp. 928-933. https://doi.org/10.1021/jf103860x
Combined meta-genomics analyses unravel candidate genes for the grain dietary fiber content in bread wheat (Triticum aestivum L.)
A - Papers appearing in refereed journals
Quraishi, U. M., Murat, F., Abrouk, M., Pont, C., Confolent, C., Oury, F. X., Ward, J. L., Boros, D., Gebruers, K., Delcour, J. A., Courtin, C. M., Bedo, Z., Saulnier, L., Guillon, F., Balzergue, S., Shewry, P. R., Feuillet, C., Charmet, G. and Salse, J. 2011. Combined meta-genomics analyses unravel candidate genes for the grain dietary fiber content in bread wheat (Triticum aestivum L.). Functional and Integrative Genomics. 11, pp. 71-83. https://doi.org/10.1007/s10142-010-0183-2
Plant metabolomics applications in the Brassicaceae: added value for science and industry
C1 - Edited contributions to conferences/learned societies
Hall, R. D., De Vos, R. C. H. and Ward, J. L. 2010. Plant metabolomics applications in the Brassicaceae: added value for science and industry. International Society of Horticultural Science (ISHS).
A combined 1H nuclear magnetic resonance and electrospray ionization-mass spectrometry analysis to understand the basal metabolism of plant-pathogenic Fusarium spp
A - Papers appearing in refereed journals
Lowe, R. G. T., Allwood, J. W., Galster, A. M., Urban, M., Daudi, A., Canning, G., Ward, J. L., Beale, M. H. and Hammond-Kosack, K. E. 2010. A combined 1H nuclear magnetic resonance and electrospray ionization-mass spectrometry analysis to understand the basal metabolism of plant-pathogenic Fusarium spp. Molecular Plant-Microbe Interactions - MPMI. 23 (12), pp. 1605-1618. https://doi.org/10.1094/MPMI-04-10-0092
The use of metabolomic profiling to identify new quality determinants in wheat
C1 - Edited contributions to conferences/learned societies
Shewry, P. R., Millar, S. and Ward, J. L. 2010. The use of metabolomic profiling to identify new quality determinants in wheat. Branlard, G. (ed.) Gluten Proteins 2009: Proceedings of the 10th International Gluten Workshop, Clermont-Ferrand, 7-9 September 2009 . Institut National de la Recherche Agronomique (INRA), Paris. pp. 38-41
Functional analysis of folate polyglutamylation and its essential role in plant metabolism and development
A - Papers appearing in refereed journals
Mehrshahi, P., Gonzalez-Jorge, S., Akhtar, T. A., Ward, J. L., Santoyo-Castelazo, A., Marcus, S. E., Lara-Nunez, A., Ravanel, S., Hawkins, N. D., Beale, M. H., Barrett, D. A., Knox, J. P., Gregory, J. F. Iii, Hanson, A. D., Bennett, M. J. and Dellapenna, D. 2010. Functional analysis of folate polyglutamylation and its essential role in plant metabolism and development. The Plant Journal. 64, pp. 267-279. https://doi.org/10.1111/j.1365-313X.2010.04336.x
The HEALTHGRAIN wheat diversity screen: effects of genotype and environment on phytochemicals and dietary fiber components
A - Papers appearing in refereed journals
Shewry, P. R., Piironen, V., Lampi, A-M., Edelmann, M., Kariluoto, S., Nurmi, T., Fernandez-Orozco, R., Ravel, C., Charmet, G., Andersson, A. A. M., Aman, P., Boros, D., Gebruers, K., Dornez, E., Courtin, C. M., Delcour, J. A., Rakszegi, M., Bedo, Z. and Ward, J. L. 2010. The HEALTHGRAIN wheat diversity screen: effects of genotype and environment on phytochemicals and dietary fiber components. Journal of Agricultural and Food Chemistry - JAFC. 58, pp. 9291-9298. https://doi.org/10.1021/jf100039b
Effects of genotype and environment on the content and composition of phytochemicals and dietary fiber components in rye in the HEALTHGRAIN diversity screen
A - Papers appearing in refereed journals
Shewry, P. R., Piironen, V., Lampi, A-M., Edelmann, M., Kariluoto, S., Nurmi, T., Fernandez-Orozco, R., Andersson, A. A. M., Aman, P., Fras, A., Boros, D., Gebruers, K., Dornez, E., Courtin, C. M., Delcour, J. A., Ravel, C., Charmet, G., Rakszegi, M., Bedo, Z. and Ward, J. L. 2010. Effects of genotype and environment on the content and composition of phytochemicals and dietary fiber components in rye in the HEALTHGRAIN diversity screen. Journal of Agricultural and Food Chemistry - JAFC. 58, pp. 9372-9383. https://doi.org/10.1021/jf100053d
Effects of environment and genotype on phenolic acids in wheat in the HEALTHGRAIN diversity screen
A - Papers appearing in refereed journals
Fernandez-Orozco, R., Li, L., Harflett, C., Shewry, P. R. and Ward, J. L. 2010. Effects of environment and genotype on phenolic acids in wheat in the HEALTHGRAIN diversity screen. Journal of Agricultural and Food Chemistry - JAFC. 58, pp. 9341-9352. https://doi.org/10.1021/jf102017s
The metabolic transition during disease following infection of Arabidopsis thaliana by Pseudomonas syringae pv. tomato
A - Papers appearing in refereed journals
Ward, J. L., Forcat, S., Beckmann, M., Bennett, M., Miller, S. J., Baker, J. M., Hawkins, N. D., Vermeer, C. P., Lu, C., Lin, W., Truman, W. M., Beale, M. H., Draper, J., Mansfield, J. W. and Grant, M. 2010. The metabolic transition during disease following infection of Arabidopsis thaliana by Pseudomonas syringae pv. tomato. The Plant Journal. 63 (3), pp. 443-457. https://doi.org/10.1111/j.1365-313X.2010.04254.x
Enhancement of plant metabolite fingerprinting by machine learning
A - Papers appearing in refereed journals
Scott, I. M., Vermeer, C. P., Liakata, M., Corol, D. I., Ward, J. L., Lin, W., Johnson, H. E., Whitehead, L., Kular, B., Baker, J. M., Walsh, S., Dave, A., Larson, T. R., Graham, I. A., Wang, T. L., King, R. D., Draper, J. and Beale, M. H. 2010. Enhancement of plant metabolite fingerprinting by machine learning. Plant Physiology. 153, pp. 1506-1520. https://doi.org/10.1104/pp.109.150524
Improving the benefits of wheat as a source of dietary fibre
B - Book chapters etc edited externally
Shewry, P. R., Saulnier, L., Guillon, F., Gebruers, K., Courtin, C., Delcour, J., Toole, G., Boros, D., Salse, J., Ravel, C., Mills, E. N. C., Ward, J. L. and Charmet, G. 2010. Improving the benefits of wheat as a source of dietary fibre. in: Jones, J., Topping, D., McCleary, B. and Vanderkamp, J. W. (ed.) Dietary fibre: new frontiers for food and health Wageningen Academic Publishers, Wageningen, Netherlands. pp. 65-78
Future prospects for the analysis of bioactive components in cereal grain
G - Articles in popular magazines and other technical publications
Ward, J. L. and Shewry, P. R. 2010. Future prospects for the analysis of bioactive components in cereal grain. Cereal Foods World. 55, pp. 71-75. https://doi.org/10.1094/CFW-55-2-0071
An inter-laboratory comparison demonstrates that [1H]-NMR metabolite fingerprinting is a robust technique for collaborative plant metabolomic data collection
A - Papers appearing in refereed journals
Ward, J. L., Baker, J. M., Miller, S. J., Deborde, C., Maucourt, M., Biais, B., Rolin, D., Moing, A., Moco, S., Vervoort, J., Lommen, A., Schafer, H., Humpfer, E. and Beale, M. H. 2010. An inter-laboratory comparison demonstrates that [1H]-NMR metabolite fingerprinting is a robust technique for collaborative plant metabolomic data collection. Metabolomics. 6, pp. 263-273. https://doi.org/10.1007/s11306-010-0200-4
Methods for the analysis of selenium and other minerals
B - Book chapters etc edited externally
Stroud, J. L., Zhao, F-J., McGrath, S. P. and Hart, D. 2010. Methods for the analysis of selenium and other minerals. in: Shewry, P. R. and Ward, J. L. (ed.) HEALTHGRAIN methods: analysis of bioactive compounds in small grain cereals American Association of Cereal Chemists (AACC), St Paul, MN. pp. 95-111
Phenolic acids
B - Book chapters etc edited externally
Li, L., Harflett, C. and Beale, M. H. 2010. Phenolic acids. in: Shewry, P. R. and Ward, J. L. (ed.) HEALTHGRAIN methods: analysis of bioactive components in small grain cereals American Association of Cereal Chemists (AACC), St Paul, MN. pp. 41-52
Future prospects for the analysis of bioactive components in cereal grain
B - Book chapters etc edited externally
Ward, J. L. and Shewry, P. R. 2010. Future prospects for the analysis of bioactive components in cereal grain. in: Shewry, P. R. and Ward, J. L. (ed.) HEALTHGRAIN methods: analysis of bioactive components in small grain cereals American Association of Cereal Chemists (AACC), St Paul, MN. pp. 273-280
HEALTHGRAIN methods: analysis of bioactive components in small grain cereals
E - Books edited/written by staff member, alone/with others
Shewry, P. R. and Ward, J. L. 2010. HEALTHGRAIN methods: analysis of bioactive components in small grain cereals. American Association of Cereal Chemists (AACC), St Paul, MN.
Combining bioactive components with conventional targets in plant breeding programmes
B - Book chapters etc edited externally
Bedo, Z., Rakszegi, M., Lang, L., Gebruers, K., Piironen, V., Lafiandra, D. and Phillips, A. L. 2010. Combining bioactive components with conventional targets in plant breeding programmes. in: Shewry, P. R. and Ward, J. L. (ed.) HEALTHGRAIN methods: analysis of bioactive components in small grain cereals American Association of Cereal Chemists (AACC), St Paul, MN. pp. 263-272
System-wide molecular evidence for phenotypic buffering in Arabidopsis
A - Papers appearing in refereed journals
Fu, J., Keurentjes, J. J. B., Bouwmeester, H., America, T., Verstappen, F. W. A., Ward, J. L., Beale, M. H., De Vos, R. C. H., Dijkstra, M., Scheltema, R. A., Johannes, F., Koornneef, M., Vreugdenhil, D., Breitling, R. and Jansen, R. C. 2009. System-wide molecular evidence for phenotypic buffering in Arabidopsis. Nature Genetics. 41, pp. 166-167. https://doi.org/10.1038/ng.308