Sustainable Soils and Crops

TitleSustainable Soils and Crops
TypeScience Department
InstituteRothamsted Research
HeadMartin Broadley
Executive AssistantNatalia Deas

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Improving wheat health benefits through manipulation of starch composition

C1 - Edited contributions to conferences/learned societies
Lafiandra, D., Sestili, F., Botticella, E. and Phillips, A. L. 2012. Improving wheat health benefits through manipulation of starch composition. Lang, L. and Bedo, Z. (ed.) Plant Breeding for Future Generations: Proceedings 19th EUCARPIA General Congress, Budapest, 21-24 May 2012 . Agricultural Institute, Martonvasar. pp. 180-183

Diversity of nitrogen use efficiency, yield and quality in wheat germplasm

C2 - Non-edited contributions to conferences
Hawkesford, M. J. 2012. Diversity of nitrogen use efficiency, yield and quality in wheat germplasm. Lang, L. and Bedo, Z. (ed.) Plant Breeding for Future Generations: Proceedings 19th EUCARPIA General Congress, Budapest, 21-24 May 2012 . Agricultural Institute, Martonvasar. pp. 422

Toward two decades of plant biotechnology: successes, failures and prospects

A - Papers appearing in refereed journals
Halford, N. G. 2012. Toward two decades of plant biotechnology: successes, failures and prospects. Food and Energy Security. 1, pp. 9-28. https://doi.org/10.1002/fes3.3

A multi-technique investigation of copper and zinc distribution, speciation and potential bioavailability in biosolids

A - Papers appearing in refereed journals
Donner, E., Ryan, C. G., Howard, D. L., Zarcinas, B., Scheckel, K. G., McGrath, S. P., De Jonge, M. D., Paterson, D., Naidu, R. and Lombi, E. 2012. A multi-technique investigation of copper and zinc distribution, speciation and potential bioavailability in biosolids. Environmental Pollution. 166, pp. 57-64. https://doi.org/10.1016/j.envpol.2012.02.012

Modelling wheat breakage during roller milling using the Double Normalised Kumaraswamy Breakage Function: effects of kernel shape and hardness

A - Papers appearing in refereed journals
Campbell, G. M., Sharp, C., Wall, K., Mateos-Salvador, F., Gubatz, S., Huttly, A. K. and Shewry, P. R. 2012. Modelling wheat breakage during roller milling using the Double Normalised Kumaraswamy Breakage Function: effects of kernel shape and hardness. Journal of Cereal Science. 55, pp. 415-425. https://doi.org/10.1016/j.jcs.2012.02.002

Haplotype analysis of Viviparous-1 gene in CIMMYT elite bread wheat germplasm

A - Papers appearing in refereed journals
Sun, Y. W., Jones, H. D., Yang, Y., Dreisigacker, S., Li, S. M., Chen, X. M., Shewry, P. R. and Xia, L-Q. 2012. Haplotype analysis of Viviparous-1 gene in CIMMYT elite bread wheat germplasm. Euphytica. 186 (1), pp. 25-43. https://doi.org/10.1007/s10681-011-0482-2

Analysis of the developmental roles of the Arabidopsis gibberellin 20-oxidases demonstrates that GA20ox1, -2 and -3 are the dominant paralogs

A - Papers appearing in refereed journals
Plackett, A. R. G., Powers, S. J., Fernandez-Garcia, N., Urbanova, T., Takebayashi, Y., Seo, M., Jikumaru, Y., Benlloch, R., Nilsson, O., Ruiz-Rivero, O., Phillips, A. L., Wilson, Z. A., Thomas, S. G. and Hedden, P. 2012. Analysis of the developmental roles of the Arabidopsis gibberellin 20-oxidases demonstrates that GA20ox1, -2 and -3 are the dominant paralogs. The Plant Cell. 24, pp. 941-960. https://doi.org/10.1105/tpc.111.095109

Gibberellin biosynthesis and its regulation

A - Papers appearing in refereed journals
Hedden, P. and Thomas, S. G. 2012. Gibberellin biosynthesis and its regulation. Biochemical Journal. 444, pp. 11-25. https://doi.org/10.1042/BJ20120245

Engineering gibberellin metabolism in Solanum nigrum L. by ectopic expression of gibberellin oxidase genes

A - Papers appearing in refereed journals
Bhattacharya, A., Ward, D. A., Hedden, P., Phillips, A. L., Power, J. B. and Davey, M. R. 2012. Engineering gibberellin metabolism in Solanum nigrum L. by ectopic expression of gibberellin oxidase genes. Plant Cell Reports. 31, pp. 945-953. https://doi.org/10.1007/s00299-011-1214-8

Shortcomings in wheat yield predictions

A - Papers appearing in refereed journals
Semenov, M. A., Mitchell, R. A. C., Whitmore, A. P., Hawkesford, M. J., Parry, M. A. J. and Shewry, P. R. 2012. Shortcomings in wheat yield predictions. Nature Climate Change. 2, pp. 380-382. https://doi.org/10.1038/nclimate1511

The advanced soil geochemical atlas of England and Wales

E - Books edited/written by staff member, alone/with others
Rawlins, B. G., McGrath, S. P., Scheib, A. J., Breward, N., Cave, M., Lister, T. R., Ingham, M., Gowing, C. and Carter, S. 2012. The advanced soil geochemical atlas of England and Wales. British Geological Survey (BGS).

Carbon dynamics in a 60 year fallowed loamy-sand soil compared to that in a 60 year permanent arable or permanent grassland UK soil

A - Papers appearing in refereed journals
Wu, Y., Kemmitt, S., White, Robin P., Xu, J. and Brookes, P. C. 2012. Carbon dynamics in a 60 year fallowed loamy-sand soil compared to that in a 60 year permanent arable or permanent grassland UK soil. Plant and Soil. 352, pp. 51-63. https://doi.org/10.1007/s11104-011-0979-4

Trehalose 6-phosphate is required for the onset of leaf senescence associated with high carbon availability

A - Papers appearing in refereed journals
Wingler, A., Delatte, T. L., O'hara, L. E., Primavesi, L. F., Jhurreea, D., Paul, M. J. and Schluepmann, H. 2012. Trehalose 6-phosphate is required for the onset of leaf senescence associated with high carbon availability. Plant Physiology. 158 (3), pp. 1241-1251. https://doi.org/10.1104/pp.111.191908

The S-poor prolamins of wheat, barley and rye: revisited

A - Papers appearing in refereed journals
Tatham, A. S. and Shewry, P. R. 2012. The S-poor prolamins of wheat, barley and rye: revisited. Journal of Cereal Science. 55, pp. 79-99. https://doi.org/10.1016/j.jcs.2011.10.013

Localisation of iron in wheat grain using high resolution secondary ion mass spectrometry

A - Papers appearing in refereed journals
Moore, K. L., Zhao, F-J., Gritsch, C. S., Tosi, P., Hawkesford, M. J., McGrath, S. P., Shewry, P. R. and Grovenor, C. R. M. 2012. Localisation of iron in wheat grain using high resolution secondary ion mass spectrometry. Journal of Cereal Science. 55 (2), pp. 183-187. https://doi.org/10.1016/j.jcs.2011.11.005

Long-term removal of wheat straw decreases soil amorphous silica at Broadbalk, Rothamsted

A - Papers appearing in refereed journals
Guntzer, F., Keller, C., Poulton, P. R., McGrath, S. P. and Meunier, J-D. 2012. Long-term removal of wheat straw decreases soil amorphous silica at Broadbalk, Rothamsted. Plant and Soil. 352 (1-2), pp. 173-184. https://doi.org/10.1007/s11104-011-0987-4

Impacts of nitrogen application rates on the activity and diversity of denitrifying bacteria in the Broadbalk Wheat Experiment

A - Papers appearing in refereed journals
Clark, I. M., Buchkina, N., Jhurreea, D., Goulding, K. W. T. and Hirsch, P. R. 2012. Impacts of nitrogen application rates on the activity and diversity of denitrifying bacteria in the Broadbalk Wheat Experiment. Philosophical Transactions of the Royal Society B-Biological Sciences. 367, pp. 1235-1244. https://doi.org/10.1098/rstb.2011.0314

ELPIS-JP: a dataset of local-scale daily climate change scenarios for Japan

A - Papers appearing in refereed journals
Iizumi, T., Semenov, M. A., Nishimori, M., Ishigooka, Y. and Kuwagata, T. 2012. ELPIS-JP: a dataset of local-scale daily climate change scenarios for Japan. Philosophical Transactions of the Royal Society A-Mathematical Physical and Engineering Sciences. 370, pp. 1121-1139. https://doi.org/10.1098/rsta.2011.0305

The acrylamide problem: a plant and agronomic science issue

A - Papers appearing in refereed journals
Halford, N. G., Curtis, T. Y., Muttucumaru, N., Postles, J., Elmore, J. S. and Mottram, D. S. 2012. The acrylamide problem: a plant and agronomic science issue. Journal of Experimental Botany. 63, pp. 2841-2851. https://doi.org/10.1093/jxb/ers011

Selenium speciation in soil extracts using LC-ICP-MS

A - Papers appearing in refereed journals
Stroud, J. L., McGrath, S. P. and Zhao, F-J. 2012. Selenium speciation in soil extracts using LC-ICP-MS. International Journal Of Environmental Analytical Chemistry. 92, pp. 222-236. https://doi.org/10.1080/03067310903111661

In vitro screening for putative psoriasis-specific antigens among wheat proteins and peptides

A - Papers appearing in refereed journals
Skavland, J., Shewry, P. R., Marsh, J., Geisner, B. and Marcusson, J. A. 2012. In vitro screening for putative psoriasis-specific antigens among wheat proteins and peptides. British Journal Of Dermatology. 166 (1), pp. 67-73. https://doi.org/10.1111/j.1365-2133.2011.10608.x

Cell walls of developing wheat starchy endosperm: comparison of composition and RNA-Seq transcriptome

A - Papers appearing in refereed journals
Pellny, T. K., Lovegrove, A., Freeman, J., Tosi, P., Love, C. G., Knox, J. P., Shewry, P. R. and Mitchell, R. A. C. 2012. Cell walls of developing wheat starchy endosperm: comparison of composition and RNA-Seq transcriptome. Plant Physiology. 158, pp. 612-627. https://doi.org/10.1104/pp.111.189191

Pasteuria endospores from Heterodera cajani (Nematoda: Heteroderidae) exhibit inverted attachment and altered germination in cross-infection studies with Globodera pallida (Nematoda: Heteroderidae)

A - Papers appearing in refereed journals
Mohan, S., Mauchline, T. H., Rowe, J., Hirsch, P. R. and Davies, K. G. 2012. Pasteuria endospores from Heterodera cajani (Nematoda: Heteroderidae) exhibit inverted attachment and altered germination in cross-infection studies with Globodera pallida (Nematoda: Heteroderidae). FEMS Microbiology Ecology. 79 (3), pp. 675-684. https://doi.org/10.1111/j.1574-6941.2011.01249.x

Effect of long-term equilibration on the toxicity of molybdenum to soil organisms

A - Papers appearing in refereed journals
Van Gestel, C. A. M., McGrath, S. P., Smolders, E., Diez Ortiz, M., Borgman, E., Verweij, R. A., Buekers, J. and Oorts, K. 2012. Effect of long-term equilibration on the toxicity of molybdenum to soil organisms. Environmental Pollution. 162, pp. 1-7. https://doi.org/10.1016/j.envpol.2011.10.013

Evolutionary relationships and functional diversity of plant sulfate transporters

A - Papers appearing in refereed journals
Takahashi, H., Buchner, P. H., Yoshimoto, N., Hawkesford, M. J. and Shiu, S-H. 2012. Evolutionary relationships and functional diversity of plant sulfate transporters. Frontiers in Plant Science. 2, p. 119 (9pp). https://doi.org/10.3389/fpls.2011.00119

The potential to increase soil carbon stocks through reduced tillage or organic material additions in England and Wales: a case study

A - Papers appearing in refereed journals
Powlson, D. S., Bhogal, A., Chambers, B. J., Coleman, K., Macdonald, A. J., Goulding, K. W. T. and Whitmore, A. P. 2012. The potential to increase soil carbon stocks through reduced tillage or organic material additions in England and Wales: a case study. Agriculture, Ecosystems & Environment. 146, pp. 23-33. https://doi.org/10.1016/j.agee.2011.10.004

David Stewart Jenkinson FRS: 25th February 1928–16th February 2011

G - Articles in popular magazines and other technical publications
Powlson, D. S. and Brookes, P. C. 2012. David Stewart Jenkinson FRS: 25th February 1928–16th February 2011. Soil Biology and Biochemistry. 44, pp. 152-156. https://doi.org/10.1016/j.soilbio.2011.11.001

Variation in grain arsenic assessed in a diverse panel of rice (Oryza sativa) grown in multiple sites

A - Papers appearing in refereed journals
Norton, G. J., Pinson, S. R. M., Alexander, J., Mckay, S., Hansen, H., Duan, G-L., Islam, M. R., Islam, S., Stroud, J. L., Zhao, F-J., McGrath, S. P., Zhu, Y-G., Lahner, B., Yakubova, E., Guerinot, M. L., Tarpley, L., Eizenga, G. C., Salt, D. E., Meharg, A. A. and Price, A. H. 2012. Variation in grain arsenic assessed in a diverse panel of rice (Oryza sativa) grown in multiple sites. New Phytologist. 193 (3), pp. 650-664. https://doi.org/10.1111/j.1469-8137.2011.03983.x

Methylated arsenic species in plants originate from soil microorganisms

A - Papers appearing in refereed journals
Lomax, C., Liu, W-J., Wu, Liyou, Xue, K., Xiong, J., Zhou, J., McGrath, S. P., Meharg, A. A., Miller, A. J. and Zhao, F-J. 2012. Methylated arsenic species in plants originate from soil microorganisms. New Phytologist. 193 (3), pp. 665-672. https://doi.org/10.1111/j.1469-8137.2011.03956.x

Glycosyl transferases in family 61 mediate arabinofuranosyl transfer onto xylan in grasses

A - Papers appearing in refereed journals
Anders, N., Wilkinson, M. D., Lovegrove, A., Freeman, J., Tryfona, T., Pellny, T. K., Weimar, T., Mortimer, J. C., Stott, K., Baker, J. M., Defoin-Platel, M., Shewry, P. R., Dupree, P. and Mitchell, R. A. C. 2012. Glycosyl transferases in family 61 mediate arabinofuranosyl transfer onto xylan in grasses. Proceedings of the National Academy of Sciences of the United States of America. 109 (3), pp. 989-993. https://doi.org/10.1073/pnas.1115858109

Arsenic translocation in rice investigated using radioactive 73As tracer

A - Papers appearing in refereed journals
Zhao, F-J., Stroud, J. L., Khan, M. A. and McGrath, S. P. 2012. Arsenic translocation in rice investigated using radioactive 73As tracer. Plant and Soil. 350 (1-2), pp. 413-420. https://doi.org/10.1007/s11104-011-0926-4

Genetically modified crops, 2nd ed

E - Books edited/written by staff member, alone/with others
Halford, N. G. 2012. Genetically modified crops, 2nd ed. Imperial College Press, London.

A genomic network to monitor Earth

G - Articles in popular magazines and other technical publications
Davies, N., Field, D. and Hirsch, P. R. 2012. A genomic network to monitor Earth. Nature. 481 (7380), p. 145. https://doi.org/10.1038/481145a

Evidence that abscisic acid promotes degradation of SNF1-related protein kinase (SnRK) 1 in wheat and activation of a putative calcium-dependent SnRK2

A - Papers appearing in refereed journals
Coello, P., Hirano, E., Hey, S. J., Muttucumaru, N., Martinez-Barajas, E., Parry, M. A. J. and Halford, N. G. 2012. Evidence that abscisic acid promotes degradation of SNF1-related protein kinase (SnRK) 1 in wheat and activation of a putative calcium-dependent SnRK2. Journal of Experimental Botany. 63, pp. 913-924. https://doi.org/10.1093/jxb/err320

Overexpression of GCN2-type protein kinase in wheat has profound effects on free amino acid concentration and gene expression

A - Papers appearing in refereed journals
Byrne, E. H., Prosser, I. M., Muttucumaru, N., Curtis, T. Y., Wingler, A., Powers, S. J. and Halford, N. G. 2012. Overexpression of GCN2-type protein kinase in wheat has profound effects on free amino acid concentration and gene expression. Plant Biotechnology Journal. 10 (3), pp. 328-340. https://doi.org/10.1111/j.1467-7652.2011.00665.x

Challenges and opportunities for using wheat for biofuel production

B - Book chapters etc edited externally
Shewry, P. R., Freeman, J., Wilkinson, M. D., Pellny, T. K. and Mitchell, R. A. C. 2011. Challenges and opportunities for using wheat for biofuel production. in: Halford, N. G. and Karp, A. (ed.) Energy Crops London Royal Society of Chemistry (RSC). pp. 13-26 Chapter 2

Producing low acrylamide risk potatoes: a three-year public/private sector collaborative project in the United Kingdom, focussed on genetics, agronomy and storage

C1 - Edited contributions to conferences/learned societies
Halford, N. G. 2011. Producing low acrylamide risk potatoes: a three-year public/private sector collaborative project in the United Kingdom, focussed on genetics, agronomy and storage. Aspects of Applied Biology .

Producing low acrylamide risk potatoes: a three-year public/private sector collaborative project in the United Kingdom, focussed on genetics, agronomy and storage

C1 - Edited contributions to conferences/learned societies
Halford, N. G. 2011. Producing low acrylamide risk potatoes: a three-year public/private sector collaborative project in the United Kingdom, focussed on genetics, agronomy and storage. In Aspects of Applied Biology .

Temporal and spatial transgene expression using a heat-shock promoter in transgenic wheat

C1 - Edited contributions to conferences/learned societies
Freeman, J., Sparks, C. A., West, J. S., Shewry, P. R. and Jones, H. D. 2011. Temporal and spatial transgene expression using a heat-shock promoter in transgenic wheat. GM Crops: from Basic Research to Application. Aspects of Applied Biology 110 . Association of Applied Biologists (AAB) Wellesbourne Warwick . pp. 85-91

Health Grain: increasing the health benefits of wheat

C1 - Edited contributions to conferences/learned societies
Jones, H. D., Gebruers, K., Ward, J. L. and Shewry, P. R. 2011. Health Grain: increasing the health benefits of wheat. Chibbar, R. N. and Dexter, J. E. (ed.) Wheat Science Dynamics: Challenges and Opportunities. Proceedings International Wheat Quality Conference IV, Saskatoon, 2-6 June 2009 . Agrobios International, Jodhpur. pp. 419-429