Plant Sciences and the Bioeconomy

TitlePlant Sciences and the Bioeconomy
TypeScience Department
InstituteRothamsted Research
HeadFreddie Theodoulou
Executive AssistantSue Steele

Outputs

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Functional QTL mapping and genomic prediction of canopy height in wheat measured using a robotic field phenotyping platform

A - Papers appearing in refereed journals
Lyra, D. H., Virlet, N., Sadeghi-Tehran, P., Hassall, K. L., Wingen, L. U., Orford, S., Griffiths, S., Hawkesford, M. J. and Slavov, G. 2020. Functional QTL mapping and genomic prediction of canopy height in wheat measured using a robotic field phenotyping platform . Journal of Experimental Botany. p. erz545. https://doi.org/10.1093/jxb/erz545

DES2 is a fatty acid Delta 11 desaturase capable of synthesizing palmitvaccenic acid in the arbuscular mycorrhizal fungus Rhizophagus irregularis

A - Papers appearing in refereed journals
Cheeld, H., Bhutada, G., Beaudoin, F. and Eastmond, P. J. 2020. DES2 is a fatty acid Delta 11 desaturase capable of synthesizing palmitvaccenic acid in the arbuscular mycorrhizal fungus Rhizophagus irregularis. FEBS Letters. https://doi.org/10.1002/1873-3468.13762

Identification of a Δ11 desaturase from the arbuscular mycorrhizal fungus Rhizophagus irregularis

A - Papers appearing in refereed journals
Cheeld, H., Bhutada, G., Beaudoin, F. and Eastmond, P. J. 2020. Identification of a Δ11 desaturase from the arbuscular mycorrhizal fungus Rhizophagus irregularis. bioRxiv. https://doi.org/10.1101/2020.01.13.903815

Metabolic Engineering and Synthetic Biology Approaches to Enhancing Production of Long-Chain Polyunsaturated Fatty acids in Microalgae

B - Book chapters etc edited externally
Khozin-Goldberg, I. and Sayanova, O. V. 2020. Metabolic Engineering and Synthetic Biology Approaches to Enhancing Production of Long-Chain Polyunsaturated Fatty acids in Microalgae. in: Hallmann, A. and Rampelotto, P. (ed.) Grand Challenges in Algae Biotechnology. Grand Challenges in Biology and Biotechnology. Springer. pp. 249-289

Nutritional enhancement in plants – green and greener

A - Papers appearing in refereed journals
Napier, J. A. and Sayanova, O. V. 2020. Nutritional enhancement in plants – green and greener. Current Opinion in Biotechnology. 61 (February), pp. 122-127. https://doi.org/10.1016/j.copbio.2019.12.010

Loss of TaIRX9b gene function in wheat decreases chain length and amount of arabinoxylan in grain but increases cross-linking

A - Papers appearing in refereed journals
Pellny, T. K., Wood, A., Freeman, J., Halsey, K., Plummer, A., Kosik, O., Shewry, P. R., Lovegrove, A., Phillips, A. L. and Mitchell, R. A. C. 2020. Loss of TaIRX9b gene function in wheat decreases chain length and amount of arabinoxylan in grain but increases cross-linking. Plant Biotechnology Journal. pp. 1-12. https://doi.org/10.1111/pbi.13393

Sulfated flavanones and dihydroflavonols from willow

A - Papers appearing in refereed journals
Noleto-Dias, C., Harflett, C., Beale, M. H. and Ward, J. L. 2020. Sulfated flavanones and dihydroflavonols from willow. Phytochemistry Letters. 35 (February), pp. 88-93. https://doi.org/10.1016/j.phytol.2019.11.008

Genetic transformation of common wheat (Triticum aestivum L.) using biolistics

B - Book chapters etc edited externally
Sparks, C. A. and Doherty, A. 2020. Genetic transformation of common wheat (Triticum aestivum L.) using biolistics. in: Rustgi, S. and Luo, H. (ed.) Biolistic DNA Delivery in Plants New York Humana Press Inc.

Enhancement of total lipid production in vegetative tissues of alfalfa and sainfoin using chemical mutagenesis

A - Papers appearing in refereed journals
Wijekoon, C. P., Singer, S. D., Weselake, R. J., Petrie, J. R., Singh, S., Jayawardhane, K. N., Shah, S., Chen, G., Eastmond, P. J. and Acharya, S. N. 2019. Enhancement of total lipid production in vegetative tissues of alfalfa and sainfoin using chemical mutagenesis. Crop Science. 60 (6), pp. 2990-3003. https://doi.org/10.1002/csc2.20027

The Arabidopsis thaliana N-recognin E3 ligase PROTEOLYSIS1 influences the immune response.

A - Papers appearing in refereed journals
Till, C. J., Vicente, J., Zhang, H., Oszvald, M., Deery, M. J., Pastor, V., Lilley, K. S., Ray, R. V., Theodoulou, F. L. and Holdsworth, M. J. 2019. The Arabidopsis thaliana N-recognin E3 ligase PROTEOLYSIS1 influences the immune response. Plant Direct. 3 (12), p. e00194. https://doi.org/10.1002/pld3.194

Characterisation of Oil Palm Acyl-CoA-Binding Proteins and Correlation of their Gene Expression with Oil Synthesis

A - Papers appearing in refereed journals
Amiruddin, N., Chan, P-K., Azizi, N., Morris, P. E., Cham, K-L., Ong, P. W., Rosli, R., Masura, S. S., Murphy, D. J., Sambanthamurthi, R., Haslam, R. P., Chye, M-L., Harwood, J. L. and Low, E-T. L. 2019. Characterisation of Oil Palm Acyl-CoA-Binding Proteins and Correlation of their Gene Expression with Oil Synthesis. Plant and cell physiology. 61, pp. 735-747. https://doi.org/10.1093/pcp/pcz237

Arabidopsis cytosolic acyl-CoA-binding proteins function in determining seed oil composition

A - Papers appearing in refereed journals
Guo, Z. H., Ye, Z. W., Haslam, R. P., Michaelson, L. V., Napier, J. A. and Chye, M. L. 2019. Arabidopsis cytosolic acyl-CoA-binding proteins function in determining seed oil composition. Plant Direct. 3 (12), p. e00182. https://doi.org/10.1002/pld3.182

NRC4 gene cluster is not essential for bacterial flagellin-triggered immunity

A - Papers appearing in refereed journals
Wu, C. H., Adachi, H., De la Concepcion, J. C., Castells-Graells, R., Nekrasov, V. and Kamoun, S. 2019. NRC4 gene cluster is not essential for bacterial flagellin-triggered immunity. Plant Physiology. https://doi.org/10.1104/pp.19.00859

The impact of reducing fatty acid desaturation on the composition and thermal stability of rapeseed oil

A - Papers appearing in refereed journals
Kaur, H., Wang, L., Stawniak, N., Sloan, R., Van-Erp, H., Eastmond, P. J. and Bancroft, I. 2019. The impact of reducing fatty acid desaturation on the composition and thermal stability of rapeseed oil . Plant Biotechnology Journal. https://doi.org/10.1111/pbi.13263

The overexpression of rice ACYL-CoA-BINDING PROTEIN2 increases grain size and bran oil content in transgenic rice

A - Papers appearing in refereed journals
Guo, Z.-H., Haslam, R. P., Michaelson, L. V., Young, E. C., Lung, S. C., Napier, J. A. and Chye, M.L. 2019. The overexpression of rice ACYL-CoA-BINDING PROTEIN2 increases grain size and bran oil content in transgenic rice. The Plant Journal. https://doi.org/10.1111/tpj.14503

Estimation of the iron bioavailability in green vegetables using an in vitro digestion/Caco-2 cell model

A - Papers appearing in refereed journals
Rodriguez-Ramiro, I., Dellaquila, C., Ward, J. L., Neal, A. L., Bruggaber, S. F. A, Shewry, P. R. and Fairweather-Tail, S. 2019. Estimation of the iron bioavailability in green vegetables using an in vitro digestion/Caco-2 cell model. Food Chemistry. 301 (15 December), p. 125292. https://doi.org/10.1016/j.foodchem.2019.125292

Improving disease resistance in mungbean - A combined genetic and biotechnological approach

Conference poster
Bansal, A., Nekrasov, V., Rout, G. R., Rudd, J. J., Slavov, G., Chand, R. and Kanyuka, K. 2019. Improving disease resistance in mungbean - A combined genetic and biotechnological approach. BSPP 2019: Arms race: Evolution of plant pathogens and their hosts. Exhibition and Conference Centre, University of West England, Bristol, UK 02 Sep 2019

Engineering the stereoisomeric structure of seed oil to mimic human milk fat

A - Papers appearing in refereed journals
Van-Erp, H., Bryant, F. M., Martin-Moreno, J., Michaelson, L. V., Bhutada, G. and Eastmond, P. J. 2019. Engineering the stereoisomeric structure of seed oil to mimic human milk fat. Proceedings of the National Academy of Sciences. 116 (42), pp. 20947-20952. https://doi.org/10.1073/pnas.1907915116

Ethylene-mediated nitric oxide depletion pre-adapts plants to hypoxia stress

A - Papers appearing in refereed journals
Hartman, S., Liu, Z., van Veen, H., Vicente, J., Reinen, E., Martopawiro, S., Zhang, H., van Dongen, N., Bosman, F., Bassel, G. W., Visser, E. J. W., Bailey-Serres, J., Theodoulou, F. L., Hebelstrup, K. H., Gibbs, D. J., Holdsworth, M. J., Sasidharan, R. and Vosenek, L. A. C. J. 2019. Ethylene-mediated nitric oxide depletion pre-adapts plants to hypoxia stress. Nature Communications. 10 (4020). https://doi.org/10.1038/s41467-019-12045-4

Phosphorus Use Efficiency and Fertilizers: future opportunities for improvements

A - Papers appearing in refereed journals
Blackwell, M. S. A., Darch, T. and Haslam, R. P. 2019. Phosphorus Use Efficiency and Fertilizers: future opportunities for improvements. Frontiers of Agricultural Science and Engineering - FASE. 6 (4), pp. 332-340. https://doi.org/10.15302/J-FASE-2019274

Multifunctionalizing the marine diatom Phaeodactylum tricornutum for sustainable co-production of omega-3 long chain polyunsaturated fatty acids and recombinant phytase

A - Papers appearing in refereed journals
Pudney, A., Gandini, C., Economou, C., Smith, Richard T., Goddard, P., Napier, J. A., Spicer, A. and Sayanova, O. V. 2019. Multifunctionalizing the marine diatom Phaeodactylum tricornutum for sustainable co-production of omega-3 long chain polyunsaturated fatty acids and recombinant phytase. Scientific Reports. 9 (1), p. 11444. https://doi.org/10.1038/s41598-019-47875-1

Overexpression of ca1pase decreases Rubisco abundance and grain yield in wheat

A - Papers appearing in refereed journals
Lobo, A. K. M., Orr, D., Gutierrez, M. O., Andralojc, P. J., Sparks, C. A., Afan, M., Parry, J., Parry, M. A. J. and Carmo-Silva, E. 2019. Overexpression of ca1pase decreases Rubisco abundance and grain yield in wheat. Plant Physiology. 181 (October), pp. 471-479. https://doi.org/10.1104/pp.19.00693

Mutagenesis separates ATPase and thioesterase activities of the peroxisomal ABC transporter, Comatose

A - Papers appearing in refereed journals
Carrier, D., van Roermund, C., Schaedler, T. A., Rong, H., Ijlist, L., Wanders, r., Baldwin, S., Waterham, H., Theodoulou, F. L. and Baker, A. 2019. Mutagenesis separates ATPase and thioesterase activities of the peroxisomal ABC transporter, Comatose. Scientific Reports. 9. https://doi.org/10.1038/s41598-019-46685-9

Sphingolipids: towards an integrated view of metabolism during the plant stress response

A - Papers appearing in refereed journals
Huby, E., Napier, J. A., Baillieul, F., Michaelson, L. V. and Dhondt-Cordelier, S. 2019. Sphingolipids: towards an integrated view of metabolism during the plant stress response. New Phytologist. https://doi.org/10.1111/nph.15997

Use of the pre-assembled ribonucleoprotein (RNP) complex for gene editing of wheat and poplar

Conference poster
Sparks, C. A., Cerezo-Medina, S., Raffan, S. and Hahn, F. 2019. Use of the pre-assembled ribonucleoprotein (RNP) complex for gene editing of wheat and poplar. The 7th Plant Genomics and Gene Editing Congress. Rotterdam, The Netherlands 21 May 2019

The challenges of delivering genetically modified crops with nutritional enhancement traits

A - Papers appearing in refereed journals
Napier, J. A., Haslam, R. P., Tsalavouta, M. and Sayanova, O. V. 2019. The challenges of delivering genetically modified crops with nutritional enhancement traits. Nature Plants. 5, pp. 563-567. https://doi.org/10.1038/s41477-019-0430-z

Silencing an essential gene involved in infestation and digestion in grain aphid through plant‐mediated RNA interference generates aphid‐resistant wheat plants

A - Papers appearing in refereed journals
Sun, Y., Sparks, C. A., Jones, H., Riley, M., Francis, F., Du, W. and Xia, L. 2019. Silencing an essential gene involved in infestation and digestion in grain aphid through plant‐mediated RNA interference generates aphid‐resistant wheat plants. Plant Biotechnology Journal. 17 (5), pp. 852-854. https://doi.org/10.1111/pbi.13067

Non-canonical fungal G-protein coupled receptors promote Fusarium head blight on wheat

A - Papers appearing in refereed journals
Dilks, T., Halsey, K., De Vos, R., Hammond-Kosack, K. E. and Brown, N. A. 2019. Non-canonical fungal G-protein coupled receptors promote Fusarium head blight on wheat. PLOS Pathogens. 15 (4), p. e1007666. https://doi.org/10.1371/journal.ppat.1007666

Postprandial incorporation of EPA and DHA from transgenic Camelina sativa oil into blood lipids is equivalent to that from fish oil in healthy humans

A - Papers appearing in refereed journals
West, A. L., Miles, E.A., Lillycrop K. A., Han, L., Sayanova, O. V., Napier, J. A. and Calder, P. C. 2019. Postprandial incorporation of EPA and DHA from transgenic Camelina sativa oil into blood lipids is equivalent to that from fish oil in healthy humans. British Journal Of Nutrition. pp. 1-27. https://doi.org/10.1017/S0007114519000825

Basic LEUCINE ZIPPER TRANSCRIPTION FACTOR 67 transactivates DELAY OF GERMINATION 1 to establish primary seed dormancy in Arabidopsis

A - Papers appearing in refereed journals
Bryant, F. M., Hughes, D. J., Hassani-Pak, K. and Eastmond, P. J. 2019. Basic LEUCINE ZIPPER TRANSCRIPTION FACTOR 67 transactivates DELAY OF GERMINATION 1 to establish primary seed dormancy in Arabidopsis. The Plant Cell. https://doi.org/10.1105/tpc.18.00892

Update on GM canola crops as novel sources of omega-3 fish oils

A - Papers appearing in refereed journals
Napier, J. A., Olsen, R-E. and Tocher, D. R. 2019. Update on GM canola crops as novel sources of omega-3 fish oils. Plant Biotechnology Journal. 17 (4), pp. 703-705. https://doi.org/10.1111/pbi.13045

Phenylalkanoid glycosides (non-salicinoids) from wood chips of Salix triandra × dasyclados hybrid willow

A - Papers appearing in refereed journals
Noleto-Dias, C., Wu, Y., Bellisai, A., Macalpine, W. J., Beale, M. H. and Ward, J. L. 2019. Phenylalkanoid glycosides (non-salicinoids) from wood chips of Salix triandra × dasyclados hybrid willow. Molecules. 24 (6), p. 1152. https://doi.org/10.3390/molecules24061152

Omega-3 Long-Chain Polyunsaturated Fatty Acids, EPA and DHA: Bridging the Gap between Supply and Demand Nutrients

A - Papers appearing in refereed journals
Tocher, D. R., Betancor, M. B., Sprague, M., Olsen, R. E. and Napier, J. A. 2019. Omega-3 Long-Chain Polyunsaturated Fatty Acids, EPA and DHA: Bridging the Gap between Supply and Demand Nutrients . Nutrients. 11 (1), p. 89. https://doi.org/10.3390/nu11010089

A Possible Connection Between Plant Longevity and the Absence of Protein Fibrillation: Basis for Identifying Aggregation Inhibitors in Plants

A - Papers appearing in refereed journals
Mohammed-Beigi, H., Kjaer, L., Eskandari, H., Aliakbari, F., Christiansen, G., Ruvo, G., Ward, J. L. and Otzen, D.E. 2019. A Possible Connection Between Plant Longevity and the Absence of Protein Fibrillation: Basis for Identifying Aggregation Inhibitors in Plants. Frontiers in Plant Science. 10, p. 148. https://doi.org/10.3389/fpls.2019.00148

Oleuropein derivatives from olive fruit extracts reduce α-synuclein fibrillation and oligomer toxicity

A - Papers appearing in refereed journals
Mohammed-Beigi, H., Aliakbari, F., Sahin, C., Lomax, C., Tawfike, A., Shafer, N.P., Amiri-Nowdijeh, A., Eskandari, E., Moller, I.M., Hosseini-Mazinani, M., Christiansen, G., Ward, J. L., Morshedi, D. and Otzen, D.E 2019. Oleuropein derivatives from olive fruit extracts reduce α-synuclein fibrillation and oligomer toxicity. Journal of Biological Chemistry. 294, pp. 4215-4232. https://doi.org/10.1074/jbc.RA118.005723

Tandem fluorescent protein timers for non-invasive relative protein lifetime measurement in plants

A - Papers appearing in refereed journals
Zhang, H., Linster, E., Gannon, L., Leemhuis, W., Rundle, C., Theodoulou, F. L. and Wirtz, M. 2019. Tandem fluorescent protein timers for non-invasive relative protein lifetime measurement in plants. Plant Physiology. https://doi.org/10.1104/pp.19.00051

Oat and lipolysis: Food matrix effect

A - Papers appearing in refereed journals
Wilde, P. J., Garcia-Llatas, G., Lagarda, M. J, Haslam, R. P. and Grundy, M. M. L. 2019. Oat and lipolysis: Food matrix effect. Food Chemistry. 278 (25 April), pp. 683-691. https://doi.org/10.1016/j.foodchem.2018.11.113

Sequence-specific nucleases as tools for enhancing disease resistance in crops

A - Papers appearing in refereed journals
Nekrasov, V. 2019. Sequence-specific nucleases as tools for enhancing disease resistance in crops. Transgenic Research. 28 (Supplement 2), pp. 75-80. https://doi.org/10.1007/s11248-019-00137-2

Impact of heat processing on the nutritional content of Gryllus bimaculatus (black cricket)

A - Papers appearing in refereed journals
Dobermann, D., Field, L. M. and Michaelson, L. V. 2019. Impact of heat processing on the nutritional content of Gryllus bimaculatus (black cricket). Nutrition Bulletin. pp. 1-7. https://doi.org/10.1111/nbu.12374

Ectomycorrhizal inoculation with Pisolithus tinctorius reduces stress induced by drought in cork oak

A - Papers appearing in refereed journals
Sebastiana, M., Bernardes da Silva, A, Alcantara, A., Silvestre, S. and Malhó, R. 2018. Ectomycorrhizal inoculation with Pisolithus tinctorius reduces stress induced by drought in cork oak. Mycorrhiza. 28 (3), pp. 247-258. https://doi.org/10.1007/s00572-018-0823-2