Plant Sciences and the Bioeconomy
| Title | Plant Sciences and the Bioeconomy |
|---|---|
| Type | Science Department |
| Institute | Rothamsted Research |
| Head | Freddie Theodoulou |
| Executive Assistant | Sue Steele |
Outputs
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Tackling functional redundancy of Arabidopsis fatty acid elongase complexes
A - Papers appearing in refereed journals
Batsale, M., Alonso, M., Pascal, S., Thoraval, D., Haslam, R. P., Beaudoin, F., Domergue, F. and Joubes, J. 2023. Tackling functional redundancy of Arabidopsis fatty acid elongase complexes. Frontiers in Plant Science. 14, p. 1107333. https://doi.org/10.3389/fpls.2023.1107333
Comparative Compositions of Grain of Bread Wheat, Emmer and Spelt Grown with Different Levels of Nitrogen Fertilisation
A - Papers appearing in refereed journals
Lovegrove, A., Dunn, J., Pellny, T. K., Hood, J., Burridge, A. J., America, A. H. P., Gilissen, L., Timmer, R., Proos-Huijsmans, Z. A. M/, Van Straaten, J. P., Jonkers, D., Ward, J. L., Brouns, F. and Shewry, P. R. 2023. Comparative Compositions of Grain of Bread Wheat, Emmer and Spelt Grown with Different Levels of Nitrogen Fertilisation. Foods. 12 (4), p. 843. https://doi.org/10.3390/foods12040843
Engineering plant-based feedstocks for sustainable aquaculture
A - Papers appearing in refereed journals
Napier, J. A. and Betancor, M. B. 2023. Engineering plant-based feedstocks for sustainable aquaculture. Current Opinion in Plant Biology. 71, p. 102323. https://doi.org/10.1016/j.pbi.2022.102323
Reducing dietary acrylamide exposure from wheat products through crop management and imaging
A - Papers appearing in refereed journals
Oddy, J., Addy, J., Mead, A., Hall, C., Mackay, C., Ashfield, T., Mcdiarmid, F., Curtis, T. Y., Raffan, S., Wilkinson, M. D., Elmore, J. S., Cryer, N., Moreira de Almeida, I. and Halford, N. G. 2023. Reducing dietary acrylamide exposure from wheat products through crop management and imaging. Journal of Agricultural and Food Chemistry - JAFC. 71 (7), pp. 3403-3413. https://doi.org/10.1021/acs.jafc.2c07208
Genetic control of grain amino acid composition in a UK soft wheat mapping population
A - Papers appearing in refereed journals
Oddy, J., Chhetry, M., Awal, R., Addy, J., Wilkinson, M. D., Smith, D., King, R., Hall, C., Testa, R., Murray, E., Raffan, S., Curtis, T. Y., Wingen, L., Griffiths, S., Berry, S., Elmore, S. J., Cryer, N., Moreira de Almeida, I. and Halford, N. G. 2023. Genetic control of grain amino acid composition in a UK soft wheat mapping population. The Plant Genome. 16 (4), p. e20335. https://doi.org/10.1002/tpg2.20335
A point mutation in the kinase domain of CRK10 leads to xylem vessel collapse and activation of defence responses in Arabidopsis
A - Papers appearing in refereed journals
Piovesana, M., Wood, A. K. M., Smith, D. P., Deery, M. J., Bayliss, R., Carrera, E., Napier, J. A., Kurup, S. and Matthes, M. C. 2023. A point mutation in the kinase domain of CRK10 leads to xylem vessel collapse and activation of defence responses in Arabidopsis. Journal of Experimental Botany. 74 (10), pp. 3104-3121. https://doi.org/10.1093/jxb/erad080
Robust counterselection and advanced λRed recombineering enable markerless chromosomal integration of large heterologous constructs
A - Papers appearing in refereed journals
Bubnov, D. M., Yuzbashev, T., Khozov, A. A., Melkina, O. E., Vybornaya, T. V., Stan, G. and Sineoky, S. P. 2022. Robust counterselection and advanced λRed recombineering enable markerless chromosomal integration of large heterologous constructs. Nucleic Acids Research. 50 (15), pp. 8947-8960. https://doi.org/10.1093/nar/gkac649
Oils Derived from GM Crops as Sustainable Solutions to the Supply of Long-Chain Omega-3 for On-Growing Atlantic Bluefin Tuna (Thunnus thynnus L.)
A - Papers appearing in refereed journals
Betancor, M. B., Sprague, M., Gonzalez-Silvera, D., Ortega, A., De la Gandara, F., Gong, X., Napier, J. A., Tocher, D. R. and Mourente, G. 2022. Oils Derived from GM Crops as Sustainable Solutions to the Supply of Long-Chain Omega-3 for On-Growing Atlantic Bluefin Tuna (Thunnus thynnus L.). Fishes. 7 (6), p. 366. https://doi.org/10.3390/fishes7060366
Identification, characterization, and rescue of CRISPR/Cas9 generated wheat SPO11-1 mutants
A - Papers appearing in refereed journals
Hyde, L., Osman, K., Winfield, M., Sanchez-Moran, E., Higgins, J. D., Henderson, I. R., Sparks, C. A., Franklin, F. C. H. and Edwards, K. 2022. Identification, characterization, and rescue of CRISPR/Cas9 generated wheat SPO11-1 mutants. Plant Biotechnology Journal. 2022, pp. 1-4. https://doi.org/10.1111/pbi.13961
Relative Protein Lifetime Measurement in Plants Using Tandem Fluorescent Protein Timers
B - Book chapters etc edited externally
Zhang, H., Linster, E., Wirtz, M. and Theodoulou, F. L. 2022. Relative Protein Lifetime Measurement in Plants Using Tandem Fluorescent Protein Timers. in: Lois, L. M. and Trujillo, M. (ed.) Plant Proteostasis New York Humana Press Inc. pp. 201-220
Insecticidal Activities of Atriplex halimus L., Salvia rosmarinus Spenn. and Cuminum cyminum L. against Dactylopius opuntiae (Cockerell) under Laboratory and Greenhouse Conditions.
A - Papers appearing in refereed journals
Naboulsi, I., Fakhouri, K. E., Lamzira, R., Ramdani, C., Bitchagno-Mbahbou, G., Boulamtat, R., Bakrim, W. B., Mahdi, I., Aboulmouhajir, A., Yasri, A., Bouhssini, M. E., Ward, J. L. and Sobeh, M. 2022. Insecticidal Activities of Atriplex halimus L., Salvia rosmarinus Spenn. and Cuminum cyminum L. against Dactylopius opuntiae (Cockerell) under Laboratory and Greenhouse Conditions. Insects. 13 (10), p. 930. https://doi.org/10.3390/insects13100930
Toward the Allelopathy of Peganum sp. and Related Chemical Constituents in Agriculture
A - Papers appearing in refereed journals
Bitchagno-Mbahbou, G., Bouhssini, M. E., Mahdi, I., Ward, J. L. and Sobeh, M. 2022. Toward the Allelopathy of Peganum sp. and Related Chemical Constituents in Agriculture. Frontiers in Plant Science. 12, p. 796103. https://doi.org/10.3389/fpls.2021.796103
CRISPR for accelerating genetic gains in under utilized crops of the drylands: Progress and prospects
A - Papers appearing in refereed journals
Sharma, K. K., Palakolanu, S. R., Bhattacharya, J., Shankhapal, A. R. and Bhatnagar-Mathur, P. 2022. CRISPR for accelerating genetic gains in under utilized crops of the drylands: Progress and prospects. Frontiers in Genetics. 13, p. 999207. https://doi.org/10.3389/fgene.2022.999207
Demystifying racemic natural products in the homochiral world
A - Papers appearing in refereed journals
Bitchagno-Mbahbou, G., Nchiozem-Ngnitedem, V., Melchert, D. and Fobofou, S. A. 2022. Demystifying racemic natural products in the homochiral world. Nature Reviews Chemistry. 6 (11), pp. 806-822. https://doi.org/10.1038/s41570-022-00431-4
A stable start - cotranslational Nt-acetylation promotes proteome stability across kingdoms
A - Papers appearing in refereed journals
Gibbs, D. J., Bailey, M. and Etherington, R. D. 2022. A stable start - cotranslational Nt-acetylation promotes proteome stability across kingdoms. Trends in Cell biology. 32 (5), pp. 374-376. https://doi.org/10.1016/j.tcb.2022.02.004
Profiling Phospholipids within Atlantic Salmon Salmo salar with Regards to a Novel Terrestrial Omega-3 Oil Source
A - Papers appearing in refereed journals
Broughton, R., Tocher, D. R., Napier, J. A. and Betancor, M. B. 2022. Profiling Phospholipids within Atlantic Salmon Salmo salar with Regards to a Novel Terrestrial Omega-3 Oil Source. Metabolites. 12 (9), p. 851. https://doi.org/10.3390/metabo12090851
Something in the air
A - Papers appearing in refereed journals
Napier, J. A. 2022. Something in the air. Nature Sustainability. 5 (11), pp. 916-917. https://doi.org/10.1038/s41893-022-00954-0
Proanthocyanidin Biosynthesis in the Developing Wheat Seed Coat Investigated by Chemical and RNA-seq Analysis
A - Papers appearing in refereed journals
Phillips, A. L., Vaughan, S., Baker, J., Primavesi, L. F., Patil, A., King, R., Hassani-Pak, K., Kulasekaran, S., Coghill, J., Ward, J. L. and Huttly, A. K. 2022. Proanthocyanidin Biosynthesis in the Developing Wheat Seed Coat Investigated by Chemical and RNA-seq Analysis. Plant Direct. 6 (10), p. e453. https://doi.org/10.1002/pld3.453
Novel molecules and target genes for vegetative heat tolerance in wheat
A - Papers appearing in refereed journals
Rose, T., Wilkinson, M. D., Lowe, C., Xu, J., Hughes, D. J., Hassall, K. L., Hassani-Pak, K., Amberkar, S., Noleto-Dias, C., Ward, J. L. and Heuer, S. 2022. Novel molecules and target genes for vegetative heat tolerance in wheat. Plant Environmental Interactions. 3 (6), pp. 264-289. https://doi.org/10.1002/pei3.10096
Using field evaluation and systematic iteration to rationalize the accumulation of omega-3 long-chain polyunsaturated fatty acids in transgenic Camelina sativa
A - Papers appearing in refereed journals
Han, L., Silvestre, S., Sayanova, O. V., Haslam, R. P. and Napier, J. A. 2022. Using field evaluation and systematic iteration to rationalize the accumulation of omega-3 long-chain polyunsaturated fatty acids in transgenic Camelina sativa. Plant Biotechnology Journal. 20 (9), pp. 1833-1852. https://doi.org/10.1111/pbi.13867
Interview with Prof. Nigel G. Halford, Rothamsted Research, United Kingdom
A - Papers appearing in refereed journals
Azevedo, R. A. and Haslam, R. P. 2022. Interview with Prof. Nigel G. Halford, Rothamsted Research, United Kingdom. Annals of Applied Biology - AAB. 181 (2), pp. 130-132. https://doi.org/10.1111/aab.12790
Burden tests can be used to map causal genes for a simple metabolic trait in an exome-sequenced polyploid mutant population
A - Papers appearing in refereed journals
Menard, G. N. and Eastmond, P. J. 2022. Burden tests can be used to map causal genes for a simple metabolic trait in an exome-sequenced polyploid mutant population. Plant Biotechnology Journal. 20 (10), pp. 1850-1852. https://doi.org/10.1111/pbi.13890
Enhancing the accumulation of eicosapentaenoic acid and docosahexaenoic acid in transgenic Camelina through the CRISPR-Cas9 inactivation of the competing FAE1 pathway
A - Papers appearing in refereed journals
Han, L., Haslam, R. P., Silvestre, S., Lu, C. and Napier, J. A. 2022. Enhancing the accumulation of eicosapentaenoic acid and docosahexaenoic acid in transgenic Camelina through the CRISPR-Cas9 inactivation of the competing FAE1 pathway. Plant Biotechnology Journal. 20 (8), pp. 1444-1446. https://doi.org/10.1111/pbi.13876
Plant proteostasis-a proven and promising target for crop improvement - Editorial
A - Papers appearing in refereed journals
Theodoulou, F. L., Orosa-Puente, B., Trujillo, M. and Rubio V. 2022. Plant proteostasis-a proven and promising target for crop improvement - Editorial. Essays in Biochemistry. 66 (2), pp. 75-85. https://doi.org/10.1042/EBC20210078
Ethylene augments root hypoxia tolerance via growth cessation and reactive oxygen species amelioration
A - Papers appearing in refereed journals
Liu, Z., Hartman, S., Van Veen, H., Zhang, H., Leeggangers , H. A. C. F., Martopawiro, S., Bosman, F., De Deugd, F., Su, P., Hummel, M., Rankenberg, T., Hassall, K. L., Bailey-Serres, J., Theodoulou, F. L., Voesenek L. A. C. J. and Sasidharan, R. 2022. Ethylene augments root hypoxia tolerance via growth cessation and reactive oxygen species amelioration. Plant Physiology. 190 (2), pp. 1365-1383. https://doi.org/10.1093/plphys/kiac245
Monogalactosyl Diacylglycerol Synthase 3 (OsMGD3) affects phosphate utilization and acquisition in rice
A - Papers appearing in refereed journals
Verma, L., Bhadouria, J., Bhunia, R., Singh, S., Panchal, P., Bhatia, C., Eastmond, P. J. and Giri, J. 2022. Monogalactosyl Diacylglycerol Synthase 3 (OsMGD3) affects phosphate utilization and acquisition in rice. Journal of Experimental Botany. 73 (14), pp. 5033-5051. https://doi.org/10.1093/jxb/erac192
Heterologous expression of antimicrobial peptides S-thanatin and bovine lactoferricin in the marine diatom Phaeodactylum tricornutum enhances native antimicrobial activity against Gram-negative bacteria
A - Papers appearing in refereed journals
Baiden, N., Gandini, C., Goddard, P. and Sayanova, O. V. 2022. Heterologous expression of antimicrobial peptides S-thanatin and bovine lactoferricin in the marine diatom Phaeodactylum tricornutum enhances native antimicrobial activity against Gram-negative bacteria . Algal Research. 69, p. 102927. https://doi.org/10.1016/j.algal.2022.102927
A native promoter–gene fusion created by CRISPR/Cas9-mediated genomic deletion offers a transgene-free method to drive oil accumulation in leaves
A - Papers appearing in refereed journals
Bhunia, R. K., Menard, G. N. and Eastmond, P. J. 2022. A native promoter–gene fusion created by CRISPR/Cas9-mediated genomic deletion offers a transgene-free method to drive oil accumulation in leaves. FEBS Letters. 596 (15), pp. 1865-1870. https://doi.org/10.1002/1873-3468.14365
Dissecting weed adaptation: fitness and trait correlations in herbicide resistant Alopecurus myosuroides
A - Papers appearing in refereed journals
Comont, D., Macgregor, D., Crook, L., Hull, R. I., Nguyen, L., Freckleton, R. P., Childs, D. Z. and Neve, P. 2022. Dissecting weed adaptation: fitness and trait correlations in herbicide resistant Alopecurus myosuroides. Pest Management Science. 78 (7), pp. 3039-3050. https://doi.org/10.1002/ps.6930
Characterisation of Grains and Flour Fractions from Field Grown Transgenic Oil-Accumulating Wheat Expressing Oat WRI1
A - Papers appearing in refereed journals
Snell, P., Wilkinson, M. D., Taylor, G. J., Hall, S., Sharma, S., Sirijovski, N., Hansson, M., Shewry, P. R., Hofvander, P. and Grimberg, A. 2022. Characterisation of Grains and Flour Fractions from Field Grown Transgenic Oil-Accumulating Wheat Expressing Oat WRI1. Plants - Basel. 11 (7), p. 889. https://doi.org/10.3390/plants11070889
The potential of fluorescence imaging to distinguish insect pest and non-pest species
A - Papers appearing in refereed journals
Shortall, C. R., Perryman, S. A. M., Halsey, K. and West, J. S. 2022. The potential of fluorescence imaging to distinguish insect pest and non-pest species. Outlooks on Pest Management. 33 (1), pp. 13-16(4). https://doi.org/10.1564/v33_feb_05
Diverting phenylpropanoid pathway flux from sinapine to produce industrially useful 4-vinyl derivatives of hydroxycinnamic acids in Brassicaceous oilseeds
A - Papers appearing in refereed journals
Menard, G. N., Langdon, M., Bhunia, R., Shankhapal, A., Noleto-Dias, C., Lomax, C., Ward, J. L., Kurup, S. and Eastmond, P. J. 2022. Diverting phenylpropanoid pathway flux from sinapine to produce industrially useful 4-vinyl derivatives of hydroxycinnamic acids in Brassicaceous oilseeds. Metabolic Engineering. 70, pp. 196-205. https://doi.org/10.1016/j.ymben.2022.01.016
Ethylene augments root hypoxia tolerance through amelioration of reactive oxygen species and growth cessation
A - Papers appearing in refereed journals
Liu, Z., Hartman, S., Van Veen, H., Zhang, H., Leeggangers, H. A. C. F., Martopawiro, S., Bosman, F., De Deugd, F., Su, P., Hummel, M., Rankenberg, T., Hassall, K. L., Bailey-Serres, J., Theodoulou, F. L., Voesenek, L. A. C. J. and Sasidharan, R. 2022. Ethylene augments root hypoxia tolerance through amelioration of reactive oxygen species and growth cessation. bioRxiv. https://doi.org/10.1101/2022.01.21.477196
Production of human milk fat substitute by engineered strains of Yarrowia lipolytica
A - Papers appearing in refereed journals
Bhutada, G., Menard, G. N., Bhunia, R. K., Hapeta, P. P., Ledesma-Amaro, R. and Eastmond, P. J. 2022. Production of human milk fat substitute by engineered strains of Yarrowia lipolytica. Metabolic Engineering Communications. 14 (June), p. e00192. https://doi.org/10.1016/j.mec.2022.e00192
Understanding the Relationships between Free Asparagine in Grain and Other Traits to Breed Low-Asparagine Wheat
A - Papers appearing in refereed journals
Oddy, J., Raffan, S., Wilkinson, M. D., Elmore, J. S. and Halford, N. G. 2022. Understanding the Relationships between Free Asparagine in Grain and Other Traits to Breed Low-Asparagine Wheat. Plants - Basel. 11 (5), p. 669. https://doi.org/10.3390/plants11050669
Dissecting grilled red and white meat flavor: Its characteristics, production mechanisms, influencing factors and chemical hazards
A - Papers appearing in refereed journals
Bassam, S. M., Noleto-Dias, C. and Farag, M. A. 2022. Dissecting grilled red and white meat flavor: Its characteristics, production mechanisms, influencing factors and chemical hazards. Food Chemistry. 371, p. 131139. https://doi.org/10.1016/j.foodchem.2021.131139
A Modular Cloning Toolkit for Genome Editing in Cereals
B - Book chapters etc edited externally
Hahn, F., Sanjurjo-Loures, L. and Nekrasov, V. 2022. A Modular Cloning Toolkit for Genome Editing in Cereals. in: Bilichak, A. and Laurie, J. D. (ed.) Accelerated Breeding of Cereal Crops New York, NY Humana Press Inc. pp. 209-224
Engineering Yarrowia lipolytica for the selective and high-level production of isocitric acid through manipulation of mitochondrial dicarboxylate–tricarboxylate carriers
A - Papers appearing in refereed journals
Yuzbasheva, E. Y., Scarcia, P., Yuzbashev, T., Messina, E., Kosikhina, I. M., Palmieri, L., Shutov, A. V., Taratynova, M. O., Amaro, R. L., Palmieri, F., Sineoky, S. P. and Agrimi, G. 2021. Engineering Yarrowia lipolytica for the selective and high-level production of isocitric acid through manipulation of mitochondrial dicarboxylate–tricarboxylate carriers. Metabolic Engineering. 65, pp. 156-166. https://doi.org/10.1016/j.ymben.2020.11.001
Fitness Cost Associated With Enhanced EPSPS Gene Copy Number and Glyphosate Resistance in an Amaranthus tuberculatus Population
A - Papers appearing in refereed journals
Cockerton, H. m., Kaundun, S. S., Nguyen, L., Hutchings, S. J., Dale, R. P., Howell, A. and Neve, P. 2021. Fitness Cost Associated With Enhanced EPSPS Gene Copy Number and Glyphosate Resistance in an Amaranthus tuberculatus Population. Frontiers in Plant Science. 12, p. 651381. https://doi.org/10.3389/fpls.2021.651381
Laboratory phenomics predicts field performance and identifies superior indica haplotypes for early seedling vigour in dry direct-seeded rice
A - Papers appearing in refereed journals
Menard, G. N., Sandhu, N., Anderson, D., Catolos, M., Hassall, K. L., Eastmond, P. J., Kumar, A. and Kurup, S. 2021. Laboratory phenomics predicts field performance and identifies superior indica haplotypes for early seedling vigour in dry direct-seeded rice. Genomics. 113 (6), pp. 4227-4236. https://doi.org/10.1016/j.ygeno.2021.11.006
People
- Bailey, Mark
- Beale, Mike
- Beaudoin, Frederic
- Bogomilova, Anna
- Cerezo-Medina, Sergio
- Eastmond, Peter
- Forgatti-Hell, Aline
- Halsey, Kirstie
- Han, Lihua
- Hanley, Steve
- Harflett, Claudia
- Haslam, Richard
- Kallam, Kalyani
- Kaniganti, Sirisha
- Kurup, Smita
- Ladejobi, Funmi
- Langdon, Mollie
- Li, Xiaowei
- Lomax, Charlotte
- Magaji-Umashankar, Anjana
- Makeeva, Daria
- Matthes, Michaela
- Meek, Owain
- Menard, Guillaume
- Michaelson, Louise
- Napier, Johnathan
- Nekrasov, Vladimir
- Noleto-Dias, Clarice
- Roberts, Nathan
- Ruvo, Gianluca
- Sayanova, Olga
- Shankhapal, Aishwarya
- Silvestre, Susana
- Slavov, Gancho
- Sokolowska, Klaudia
- Theodoulou, Freddie
- Titman, Sophie
- Ward, Jane
- Wilkinson, Mark
- Williams, Jake
- Yuzbashev, Tigran
- Zhang, Hongtao
- Zoclanclounon, Ange
- Zuluaga-Parra, David