Rothamsted Research

TitleRothamsted Research
TypeInstitute

Outputs

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Draft genome sequence of the coccolithovirus Emiliania huxleyi virus 203

A - Papers appearing in refereed journals
Nissimov, J. I., Worthy, C. A., Rooks, P., Napier, J. A., Kimmance, S. A., Henn, M. R., Ogata, H. and Allen, M. J. 2011. Draft genome sequence of the coccolithovirus Emiliania huxleyi virus 203. Journal of Virology. 85 (24), pp. 13468-13469. https://doi.org/10.1128/JVI.06440-11

Interactions of piperonyl butoxide and its analogue with CYP3A4

C2 - Non-edited contributions to conferences
Moores, G. D., Alptekin, S., Field, L. M. and Philippou, D. 2011. Interactions of piperonyl butoxide and its analogue with CYP3A4. https://doi.org/10.1016/j.copbio.2011.05.210

Reducing take-all inoculum build-up during a first wheat crop

C2 - Non-edited contributions to conferences
Mcmillan, V. E., Hammond-Kosack, K. E., Kanyuka, K. and Gutteridge, R. 2011. Reducing take-all inoculum build-up during a first wheat crop. APS-IPPC Joint Meeting, Tampa, Florida, USA, 30 July -3 August 2011. American Phytopathological Society (APS).

Estimation of seed production by Myosotis arvensis, Veronica hederifolia and Viola arvensis under different competitive conditions

A - Papers appearing in refereed journals
Lutman, P. J. W., Wright, K. J., Berry, K., Freeman, S. E. and Tatnell, L. 2011. Estimation of seed production by Myosotis arvensis, Veronica hederifolia and Viola arvensis under different competitive conditions. Weed Research. 51 (5), pp. 499-507. https://doi.org/10.1111/j.1365-3180.2011.00863.x

High Resolution Melt (HRM) analysis is an efficient tool to genotype EMS mutants in complex crop genomes

A - Papers appearing in refereed journals
O Lochlainn, S., Amoah, S., Graham, N. S., Alamer, K., Rios, J. J., Kurup, S., Stoute, A., Hammond, J. P., Ostergaard, L., King, G. J., White, P. J. and Broadley, M. R. 2011. High Resolution Melt (HRM) analysis is an efficient tool to genotype EMS mutants in complex crop genomes. Plant Methods. 7, p. 43 (9pp). https://doi.org/10.1186/1746-4811-7-43

The crystal structure of odorant binding protein 7 from Anopheles gambiae exhibits an outstanding adaptability of its binding site

A - Papers appearing in refereed journals
Lagarde, A., Spinelli, S., Tegoni, M., He, X., Field, L. M., Zhou, J-J. and Cambillau, C. 2011. The crystal structure of odorant binding protein 7 from Anopheles gambiae exhibits an outstanding adaptability of its binding site. Journal of Molecular Biology. 414, pp. 401-412. https://doi.org/10.1016/j.jmb.2011.10.005

Mammalian peroxisomal ABC transporters: from endogenous substrates to pathology and clinical significance

A - Papers appearing in refereed journals
Kemp, S., Theodoulou, F. L. and Wanders, R. J. A. 2011. Mammalian peroxisomal ABC transporters: from endogenous substrates to pathology and clinical significance. British Journal Of Pharmacology. 164 (7), pp. 1753-1766. https://doi.org/10.1111/j.1476-5381.2011.01435.x

Age-specific expression of a P450 monooxygenase (CYP6CM1) correlates with neonicotinoid resistance in Bemisia tabaci

A - Papers appearing in refereed journals
Jones, C. M., Daniels, M., Andrews, M., Slater, R., Lind, R. J., Gorman, K., Williamson, M. S. and Denholm, I. 2011. Age-specific expression of a P450 monooxygenase (CYP6CM1) correlates with neonicotinoid resistance in Bemisia tabaci. Pesticide Biochemistry and Physiology. 101, pp. 53-58. https://doi.org/10.1016/j.pestbp.2011.07.004

Interactions in a host plant-virus-vector-parasitoid system: modelling the consequences for virus transmission and disease dynamics

A - Papers appearing in refereed journals
Jeger, M. J., Chen, Z., Powell, G., Hodge, S. and Van Den Bosch, F. 2011. Interactions in a host plant-virus-vector-parasitoid system: modelling the consequences for virus transmission and disease dynamics. Virus Research. 159, pp. 183-193. https://doi.org/10.1016/j.virusres.2011.04.027

Exploring the variation in soil saturated hydraulic conductivity under a tropical rainforest using the wavelet transform

A - Papers appearing in refereed journals
Hassler, S. K., Lark, R. M., Milne, A. E. and Elsenbeer, H. 2011. Exploring the variation in soil saturated hydraulic conductivity under a tropical rainforest using the wavelet transform. European Journal of Soil Science. 62 (6), pp. 891-901. https://doi.org/10.1111/j.1365-2389.2011.01400.x

Homeostatic response to hypoxia is regulated by the N-end rule pathway in plants

A - Papers appearing in refereed journals
Gibbs, D. J., Lee, S. C., Isa, N. M., Gramuglia, S., Fukao, T., Bassel, G. W., Correia, C. S., Corbineau, F., Theodoulou, F. L., Bailey-Serres, J. and Holdsworth, M. J. 2011. Homeostatic response to hypoxia is regulated by the N-end rule pathway in plants. Nature. 479 (7373), pp. 415-418. https://doi.org/10.1038/nature10534

Manuring and stable nitrogen isotope ratios in cereals and pulses: towards a new archaeobotanical approach to the inference of land use and dietary practices

A - Papers appearing in refereed journals
Fraser, R. A., Bogaard, A., Heaton, T., Charles, M., Jones, G., Christensen, B. T., Halstead, P., Merbach, I., Poulton, P. R., Sparkes, D. and Styring, A. K. 2011. Manuring and stable nitrogen isotope ratios in cereals and pulses: towards a new archaeobotanical approach to the inference of land use and dietary practices. Journal Of Archaeological Science. 38, pp. 2790-2804. https://doi.org/10.1016/j.jas.2011.06.024

Fitness trade-off in peach-potato aphids (Myzus persicae) between insecticide resistance and vulnerability to parasitoid attack at several spatial scales

A - Papers appearing in refereed journals
Foster, S. P., Denholm, I., Poppy, G. M., Thompson, R. and Powell, W. 2011. Fitness trade-off in peach-potato aphids (Myzus persicae) between insecticide resistance and vulnerability to parasitoid attack at several spatial scales. Bulletin of Entomological Research. 101 (6), pp. 659-666. https://doi.org/10.1017/S0007485310000623

Targeted enhancement of glutamate-to-gamma-aminobutyrate conversion in Arabidopsis seeds affects carbon-nitrogen balance and storage reserves in a development-dependent manner

A - Papers appearing in refereed journals
Fait, A., Nunes Nesi, A., Angelovici, R., Lehmann, M., Anh Pham, P., Song, L., Haslam, R. P., Napier, J. A., Galili, G. and Fernie, A. R. 2011. Targeted enhancement of glutamate-to-gamma-aminobutyrate conversion in Arabidopsis seeds affects carbon-nitrogen balance and storage reserves in a development-dependent manner. Plant Physiology. 157, pp. 1026-1042. https://doi.org/10.1104/pp.111.179986

AIGO: towards a unified framework for the analysis and the inter-comparison of GO functional annotations

A - Papers appearing in refereed journals
Defoin-Platel, M., Hindle, M. M., Lysenko, A., Powers, S. J., Habash, D. Z., Rawlings, C. J. and Saqi, M. 2011. AIGO: towards a unified framework for the analysis and the inter-comparison of GO functional annotations. BMC Bioinformatics. 12, p. 431 (13pp). https://doi.org/10.1186/1471-2105-12-431

A tetrodoxin resistant voltage-gated sodium channel gene orthologue identified in aphids

C2 - Non-edited contributions to conferences
Davies, T. G. E., Amey, J. S., Burton, M. J., O'Reilly, A. O., Mellor, I. R., Wallace, B. A., Field, L. M. and Williamson, M. S. 2011. A tetrodoxin resistant voltage-gated sodium channel gene orthologue identified in aphids. Abstracts Neuroscience 2011, Washington DC, 12-16 November 2011 .

Estimating N and C transformations from stable isotope tracer studies in an intact soil food web

A - Papers appearing in refereed journals
Crotty, F. V., Adl, S. M., Blackshaw, R. P. and Murray, P. J. 2011. Estimating N and C transformations from stable isotope tracer studies in an intact soil food web. Journal Of Phycology. 47, p. S7.

Animal orientation strategies for movement in flows

A - Papers appearing in refereed journals
Chapman, J. W., Klaassen, R. H. G., Drake, V. A., Fossette, S., Hays, G. C., Metcalfe, J. D., Reynolds, A. M., Reynolds, D. R. and Alerstam, T. 2011. Animal orientation strategies for movement in flows. Current Biology. 21, pp. R861-R870. https://doi.org/10.1016/j.cub.2011.08.014

An engineered pathway for glyoxylate metabolism in tobacco plants aimed to avoid the release of ammonia in photorespiration

A - Papers appearing in refereed journals
Carvalho, J. De F. C., Madgwick, P. J., Powers, S. J., Keys, A. J., Lea, P. J. and Parry, M. A. J. 2011. An engineered pathway for glyoxylate metabolism in tobacco plants aimed to avoid the release of ammonia in photorespiration. BMC Biotechnology. 11, p. 111 (17pp). https://doi.org/10.1186/1472-6750-11-111

LC-MS/MS methods for absolute quantification and identification of proteins associated with chimeric plant oil bodies

A - Papers appearing in refereed journals
Capuano, F., Bond, N. J., Gatto, L., Beaudoin, F., Napier, J. A., Benvenuto, E., Lilley, K. S. and Baschieri, S. 2011. LC-MS/MS methods for absolute quantification and identification of proteins associated with chimeric plant oil bodies. Analytical Chemistry. 83, pp. 9267-9272. https://doi.org/10.1021/ac201733m

A comparison of sulfate and selenium accumulation in relation to the expression of sulfate transporter genes in Astragalus species

A - Papers appearing in refereed journals
Cabannes, E., Buchner, P. H., Broadley, M. R. and Hawkesford, M. J. 2011. A comparison of sulfate and selenium accumulation in relation to the expression of sulfate transporter genes in Astragalus species. Plant Physiology. 157, pp. 2227-2239. https://doi.org/10.1104/pp.111.183897

Very-long-chain fatty acids are required for cell plate formation during cytokinesis in Arabidopsis thaliana

A - Papers appearing in refereed journals
Bach, L., Gissot, L., Marion, J., Tellier, F., Moreau, P., Satiat-Jeunemaitre, B., Palauqui, J-C., Napier, J. A. and Faure, J-D. 2011. Very-long-chain fatty acids are required for cell plate formation during cytokinesis in Arabidopsis thaliana. Journal Of Cell Science. 124, pp. 3223-234. https://doi.org/10.1242/jcs.074575

Flight altitude selection increases orientation performance in high-flying nocturnal insect migrants

A - Papers appearing in refereed journals
Aralimarad, P., Reynolds, A. M., Lim, K. S., Reynolds, D. R. and Chapman, J. W. 2011. Flight altitude selection increases orientation performance in high-flying nocturnal insect migrants. Animal Behaviour. 82, pp. 1221-1225. https://doi.org/10.1016/j.anbehav.2011.09.013

OmniMapFree a unified tool to visualise and explore sequenced genomes

A - Papers appearing in refereed journals
Antoniw, J. F., Beacham, A. M., Baldwin, T. K., Urban, M., Rudd, J. J. and Hammond-Kosack, K. E. 2011. OmniMapFree a unified tool to visualise and explore sequenced genomes. BMC Bioinformatics. 12, p. 447 (14pp). https://doi.org/10.1186/1471-2105-12-447

Modelling the water balance of different grass species used for bioenergy

C1 - Edited contributions to conferences/learned societies
Triana, F., Ragaglini, G., Bonari, E., Cerasuolo, M. and Richter, G. M. 2011. Modelling the water balance of different grass species used for bioenergy. Biomass and Energy Crops. Aspects of Applied Biology 112 . Association of Applied Biologists (AAB). pp. 163-170

How do sugars regulate plant growth? A commentary on 'Trehalose 6-phosphate: connecting plant metabolism and development' by Ponnu, J. et al. (2011) Front. Plant Sci. 2:70

A - Papers appearing in refereed journals
Paul, M. J. and Van Dijck, P. 2011. How do sugars regulate plant growth? A commentary on 'Trehalose 6-phosphate: connecting plant metabolism and development' by Ponnu, J. et al. (2011) Front. Plant Sci. 2:70. Frontiers in Plant Science. 2, p. Article 90 (1pp). https://doi.org/10.3389/fpls.2011.00090

Interactions of piperonyl butoxide and its analogue with CYP3A4

C2 - Non-edited contributions to conferences
Moores, G. D., Alptekin, S., Field, L. M. and Philippou, D. 2011. Interactions of piperonyl butoxide and its analogue with CYP3A4. Abstracts European Biotechnology Congress, Istanbul, 28 September-1 October 2011 .

Modelling varietal differences of coppiced willow canopy architecture and biomass allocation

C1 - Edited contributions to conferences/learned societies
Cerasuolo, M., Cunniff, J. and Richter, G. M. 2011. Modelling varietal differences of coppiced willow canopy architecture and biomass allocation. Biomass and Energy Crops IV. Aspects of Applied Biology 112 . pp. 191-196

A comparison of the infection biology and transcriptome of wild-type and single gene deletion strains of Fusarium graminearum

F - Theses
Brown, N. A. 2011. A comparison of the infection biology and transcriptome of wild-type and single gene deletion strains of Fusarium graminearum. F - Theses

High resolution melting analysis for the detection of EMS induced mutations in wheat SBEIIa genes

A - Papers appearing in refereed journals
Botticella, E., Sestili, F., Hernandez-Lopez, A., Phillips, A. L. and Lafiandra, D. 2011. High resolution melting analysis for the detection of EMS induced mutations in wheat SBEIIa genes. BMC Plant Biology. 11, p. 156. https://doi.org/10.1186/1471-2229-11-156

Long-term bare fallow experiments: new opportunities for studying stable soil carbon

A - Papers appearing in refereed journals
Barre, P., Eglin, T., Christensen, B. T., Ciais, P., Houot, S., Katterer, T., Kogut, B., Van Oort, F., Peylin, P., Poulton, P. R., Romanenkov, V. and Chenu, C. 2011. Long-term bare fallow experiments: new opportunities for studying stable soil carbon. Agrokhimia. 12, pp. 28-36.

Phytoremediation of arsenic contaminated paddy soils with Pteris vittata markedly reduces arsenic uptake by rice

A - Papers appearing in refereed journals
Ye, W-L., Khan, M. A., McGrath, S. P. and Zhao, F-J. 2011. Phytoremediation of arsenic contaminated paddy soils with Pteris vittata markedly reduces arsenic uptake by rice. Environmental Pollution. 159, pp. 3739-3743. https://doi.org/10.1016/j.envpol.2011.07.024

Optical sensing of symptoms for early detection of crop disease

C2 - Non-edited contributions to conferences
West, J. S. 2011. Optical sensing of symptoms for early detection of crop disease. Abstracts One Day Workshop on New Technologies for Early Pest and Disease Detection, Marston, 12 October 2011 .

Potential for air sampling for early detection of crop disease

C2 - Non-edited contributions to conferences
West, J. S. 2011. Potential for air sampling for early detection of crop disease. Abstracts One Day Workshop on New Technologies for Early Pest and Disease Detection, Marston, 12 October 2011 .

Genotype and environment effects on the contents of vitamins B1, B2, B3 and B6 in wheat grain

A - Papers appearing in refereed journals
Shewry, P. R., Van Schaik, F., Ravel, C., Charmet, G., Rakszegi, M., Bedo, Z. and Ward, J. L. 2011. Genotype and environment effects on the contents of vitamins B1, B2, B3 and B6 in wheat grain. Journal of Agricultural and Food Chemistry - JAFC. 59, pp. 10564-10571. https://doi.org/10.1021/jf202762b

Improving the health benefits of wheat

C1 - Edited contributions to conferences/learned societies
Shewry, P. R., Ward, J. L., Zhao, F-J., Ravel, C., Charmet, G., Lafiandra, D. and Bedo, Z. 2011. Improving the health benefits of wheat. Czech Academy Agricultural Sciences.

Effect of water addition and the urease inhibitor NBPT on the abatement of ammonia emission from surface applied urea

A - Papers appearing in refereed journals
Sanz-Cobena, A., Misselbrook, T. H., Camp, V. and Vallejo, A. 2011. Effect of water addition and the urease inhibitor NBPT on the abatement of ammonia emission from surface applied urea. Atmospheric Environment. 45, pp. 1517-1524. https://doi.org/10.1016/j.atmosenv.2010.12.051

Postprandial glycemia, insulinemia and satiety responses in healthy subjects after whole grain rye bread made from different rye varieties. 1

A - Papers appearing in refereed journals
Rosen, L. A. H., Ostman, E. M., Shewry, P. R., Ward, J. L., Andersson, A. A. M., Piironen, V., Lampi, A-M., Rakszegi, M., Bedo, Z. and Bjorck, I. M. E. 2011. Postprandial glycemia, insulinemia and satiety responses in healthy subjects after whole grain rye bread made from different rye varieties. 1. Journal of Agricultural and Food Chemistry - JAFC. 59, pp. 12139-12148. https://doi.org/10.1021/jf2019825

Delivering resistance to a major constraint for rain-fed rice production

A - Papers appearing in refereed journals
Pickett, J. A. and Hooper, A. M. 2011. Delivering resistance to a major constraint for rain-fed rice production. New Phytologist. 192 (4), pp. 792-794. https://doi.org/10.1111/j.1469-8137.2011.03961.x

Designing and creating the North Wyke Farm Platform

C2 - Non-edited contributions to conferences
Orr, R. J., Griffith, B. A., Rose, S., Hatch, D. J., Hawkins, J. M. B. and Murray, P. J. 2011. Designing and creating the North Wyke Farm Platform. Abstracts Catchment Science 2011, Dublin, 14-16 September 2011 . pp. 35

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