Rothamsted Research

TitleRothamsted Research
TypeInstitute

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A diagnostic real-time PCR assay for the rapid identification of the tomato-potato psyllid, Bactericera cockerelli (Šulc, 1909) and development of a psyllid barcoding database

A - Papers appearing in refereed journals
Sumner-Kalkun, J. C., Sjolund, M. J., Arnsdorf, Y. M., Carnegie, M., Highet, F., Ouvrard, D., Greenslade, A. F. C., Bell, J. R., Sigvald, R. and Kenyon, D. M. 2020. A diagnostic real-time PCR assay for the rapid identification of the tomato-potato psyllid, Bactericera cockerelli (Šulc, 1909) and development of a psyllid barcoding database. PLOS ONE. 15 (3), p. e0230741. https://doi.org/10.1371/journal.pone.0230741

Environmental Perturbations Induce Correlations in Midge Swarms

A - Papers appearing in refereed journals
Van Der Vaart, K., Sinhuber, M., Reynolds, A. M. and Ouellette, N. T. 2020. Environmental Perturbations Induce Correlations in Midge Swarms. Journal of the Royal Society Interface. 17 (164), p. 20200018. https://doi.org/10.1098/rsif.2020.0018

Phenotypic variation and relationships between fatty acid concentrations and feed value of perennial ryegrass genotypes from a breeding population

A - Papers appearing in refereed journals
Morgan, S. A., Huws, S. A., Lister, S. J., Sanderson, R. and Scollan, N. D. 2020. Phenotypic variation and relationships between fatty acid concentrations and feed value of perennial ryegrass genotypes from a breeding population. Agronomy. 10 (3), p. 343. https://doi.org/10.3390/agronomy10030343

Balancing the double‐edged sword effect of increased resistant starch content and its impact on rice texture: its genetics and molecular physiological mechanisms

A - Papers appearing in refereed journals
Parween, S., Anonuevo, J. J., Butardo Jr., V. M., Misra, G., Anacleto, R., Llorente, C., Kosik, O., Romero, M. V, Bandonill, E. H., Mendioro, M. S., Lovegrove, A., Fernie, A. R., Brotman, Y and Sreenivasulu, N. 2020. Balancing the double‐edged sword effect of increased resistant starch content and its impact on rice texture: its genetics and molecular physiological mechanisms. Plant Biotechnology Journal. pp. 1-15. https://doi.org/10.1111/pbi.13339

The effect of competition on the control of invading plant pathogens

A - Papers appearing in refereed journals
Sharp, R.T., Van Den Bosch, F. and Shaw, M. W. 2020. The effect of competition on the control of invading plant pathogens. Journal of Applied Ecology. 57 (7), pp. 1403-1412. https://doi.org/10.1111/1365-2664.13618

Functional QTL mapping and genomic prediction of canopy height in wheat measured using a robotic field phenotyping platform

A - Papers appearing in refereed journals
Lyra, D. H., Virlet, N., Sadeghi-Tehran, P., Hassall, K. L., Wingen, L. U., Orford, S., Griffiths, S., Hawkesford, M. J. and Slavov, G. 2020. Functional QTL mapping and genomic prediction of canopy height in wheat measured using a robotic field phenotyping platform . Journal of Experimental Botany. p. erz545. https://doi.org/10.1093/jxb/erz545

Atmospheric reactive nitrogen concentration and deposition trends from 2011 to 2018 at an urban site in north China

A - Papers appearing in refereed journals
Luo, X., Liu, X., Pan, Y., Wen, Z., Zhang, L., Kou, C., Lv, J. and Goulding, K. W. T. 2020. Atmospheric reactive nitrogen concentration and deposition trends from 2011 to 2018 at an urban site in north China. Atmospheric Environment. 224 (March), p. 117298. https://doi.org/10.1016/j.atmosenv.2020.117298

Short-term changes in soil pore size distribution : Impact of land use

A - Papers appearing in refereed journals
Jensen, J. L., Schjonning, P., Watts, C. W., Christensen, B. T. and Munkholm, L. J. 2020. Short-term changes in soil pore size distribution : Impact of land use. Soil & Tillage Research. 199, p. 104597. https://doi.org/10.1016/j.still.2020.104597

Virus-mediated transient expression techniques enable genetic modification of Alopecurus myosuroides

A - Papers appearing in refereed journals
Mellado-Sanchez, M., Mcdiarmid, F., Cardoso, V., Kanyuka, K. and Macgregor, D. 2020. Virus-mediated transient expression techniques enable genetic modification of Alopecurus myosuroides. Plant Physiology. 183, pp. 455-459. https://doi.org/10.1104/pp.20.00205

Discerning the Difference Between Lumens and Scalariform Perforation Plates in Impeding Water Flow in Single Xylem Vessels and Vessel Networks in Cotton

A - Papers appearing in refereed journals
Gao, Y., Yang, Z., Wang, G., Sun, J. and Zhang, X. X. 2020. Discerning the Difference Between Lumens and Scalariform Perforation Plates in Impeding Water Flow in Single Xylem Vessels and Vessel Networks in Cotton. Frontiers in Plant Science. 11 (March 20), p. Article 246. https://doi.org/10.3389/fpls.2020.00246

Effect of semolina pudding prepared from starch branching enzyme IIa and b mutant wheat on glycaemic response in vitro and in vivo: a randomised controlled pilot study

A - Papers appearing in refereed journals
Corrado, M., Cherta-Murillo, A., Chambers, E. S., Wood, A., Plummer, A., Lovegrove, A., Edwards, C. H., Frost, G. S. and Hazard, B. A. 2020. Effect of semolina pudding prepared from starch branching enzyme IIa and b mutant wheat on glycaemic response in vitro and in vivo: a randomised controlled pilot study. Food and Function. 11, pp. 617-627. https://doi.org/10.1039/c9fo02460c

Are insects declining and at what rate? An analysis of standardised, systematic catches of aphid and moth abundances across Great Britain

A - Papers appearing in refereed journals
Bell, J. R., Blumgart, D. and Shortall, C. R. 2020. Are insects declining and at what rate? An analysis of standardised, systematic catches of aphid and moth abundances across Great Britain. Insect Conservation and Diversity. 13 (2), pp. 115-126. https://doi.org/10.1111/icad.12412

DES2 is a fatty acid Delta 11 desaturase capable of synthesizing palmitvaccenic acid in the arbuscular mycorrhizal fungus Rhizophagus irregularis

A - Papers appearing in refereed journals
Cheeld, H., Bhutada, G., Beaudoin, F. and Eastmond, P. J. 2020. DES2 is a fatty acid Delta 11 desaturase capable of synthesizing palmitvaccenic acid in the arbuscular mycorrhizal fungus Rhizophagus irregularis. FEBS Letters. https://doi.org/10.1002/1873-3468.13762

Physicochemical and cooking quality characteristics of South American rice cultivars parboiled at different steaming pressures

A - Papers appearing in refereed journals
Villanova, F. A., El Halal, S. L. M., Vanier, N. L., Wang, Y-J. and Oliveira, M. 2020. Physicochemical and cooking quality characteristics of South American rice cultivars parboiled at different steaming pressures. Cereal chemistry. 97, pp. 472-282. https://doi.org/10.1002/cche.10262

Methane Emissions, Performance and Carcass Characteristics of Different Lines of Beef Steers Reared on Pasture and Finished in Feedlot

A - Papers appearing in refereed journals
Meo-Filho, P., Berndt, A., Marcondes, C. R., Pedroso, A. F., Sakamoto, L.S., Boas, D. F. V., Rodrigues, P. H. M., Rivero, M. J. and Bueno, I. C. S. 2020. Methane Emissions, Performance and Carcass Characteristics of Different Lines of Beef Steers Reared on Pasture and Finished in Feedlot. Animals. 10 (2), p. 303. https://doi.org/10.3390/ani10020303

The effects of cropping sequence, fertilization, and straw management on the yield stability of winter wheat (1986–2017) in the Broadbalk Wheat Experiment, Rothamsted, UK.

A - Papers appearing in refereed journals
Macholdt, J., Piepho, H-P., Honermeier, B., Perryman, S. A. M., Macdonald, A. J. and Poulton, P. R. 2020. The effects of cropping sequence, fertilization, and straw management on the yield stability of winter wheat (1986–2017) in the Broadbalk Wheat Experiment, Rothamsted, UK. The Journal of Agricultural Science. 158 (1-2), pp. 65-79. https://doi.org/10.1017/S0021859620000301

Similarities between Insect Swarms and Isothermal Globular Clusters

A - Papers appearing in refereed journals
Gorbonos, D., Van der Vaart, K., Sinhuber, M., Puckett, J. G., Ouellette, N. T., Reynolds, A. M. and Gov, N. S. 2020. Similarities between Insect Swarms and Isothermal Globular Clusters. Physical Review Research. 2 (1), p. 013271. https://doi.org/10.1103/PhysRevResearch.2.013271

Identification of a major QTL and associated molecular marker for high arabinoxylan fibre in white wheat flour

A - Papers appearing in refereed journals
Lovegrove, A., Wingen, L. U., Plummer, A., Wood, A., Passmore, D., Kosik, O., Freeman, J., Mitchell, R. A. C., Hassall, K. L., Ulker, M., Tremmel-Bede, K., Rakszegi, M., Bedo, Z., Perretant, M-R., Charmet, G., Pont, C., Salse, J., Leverington Waite, M., Orford, S., Burridge, A., Pellny, T. K., Shewry, P. R. and Griffiths, S. 2020. Identification of a major QTL and associated molecular marker for high arabinoxylan fibre in white wheat flour. PLOS ONE. 15 (2), p. e0227826. https://doi.org/10.1371/journal.pone.0227826

Why do crop models diverge substantially in climate impact projections? A comprehensive analysis based on eight barley crop models

A - Papers appearing in refereed journals
Tao, F., Palosuo, T., Rotter, R. P., Hernandez Diaz-Ambrona, C. G., Minguez, M. I., Semenov, M. A., Kersebaum, K. C., Cammarano, D., Specka, X., Nendel, C., Srivastava, A. K., Ewert, F., Padovan, G., Ferrise, R., Martre, P., Rodriguez, L., Ruiz-Ramos, M., Gaiser, T., Hohn, J. G., Salo, T., Dibari, C. and Schulman, A. H. 2020. Why do crop models diverge substantially in climate impact projections? A comprehensive analysis based on eight barley crop models. Agricultural and Forest Meteorology. 281, p. 107851. https://doi.org/10.1016/j.agrformet.2019.107851

Identification of a Δ11 desaturase from the arbuscular mycorrhizal fungus Rhizophagus irregularis

A - Papers appearing in refereed journals
Cheeld, H., Bhutada, G., Beaudoin, F. and Eastmond, P. J. 2020. Identification of a Δ11 desaturase from the arbuscular mycorrhizal fungus Rhizophagus irregularis. bioRxiv. https://doi.org/10.1101/2020.01.13.903815

Metabolic Engineering and Synthetic Biology Approaches to Enhancing Production of Long-Chain Polyunsaturated Fatty acids in Microalgae

B - Book chapters etc edited externally
Khozin-Goldberg, I. and Sayanova, O. V. 2020. Metabolic Engineering and Synthetic Biology Approaches to Enhancing Production of Long-Chain Polyunsaturated Fatty acids in Microalgae. in: Hallmann, A. and Rampelotto, P. (ed.) Grand Challenges in Algae Biotechnology. Grand Challenges in Biology and Biotechnology. Springer. pp. 249-289

Sensitivity of source apportionment predicted by a Bayesian tracer mixing model to the inclusion of a sediment connectivity index as an informative prior: Illustration using the Kharka catchment (Nepal)

A - Papers appearing in refereed journals
Upadhayay, H. R., Lamichhane, S., Bajracharya, R. M., Cornelis, W., Collins, A. L. and Boeckx, P. 2020. Sensitivity of source apportionment predicted by a Bayesian tracer mixing model to the inclusion of a sediment connectivity index as an informative prior: Illustration using the Kharka catchment (Nepal). Science of the Total Environment. 713, p. 136703. https://doi.org/10.1016/j.scitotenv.2020.136703

Lactoferrin quantification in cattle faeces by ELISA

A - Papers appearing in refereed journals
Cooke, A. S., Watt, K. A., Albery, G. F., Morgan, E. R. and Dungait, J. A. J. 2020. Lactoferrin quantification in cattle faeces by ELISA. PeerJ. 8, p. e8631. https://doi.org/10.7717/peerj.8631

Population genetic structure and predominance of cyclical parthenogenesis in the bird cherry–oat aphid Rhopalosiphum padi in England

A - Papers appearing in refereed journals
Morales-Hojas, R., Gonzalez-Uriarte, A., Alvira-Iraizoz, F., Jenkins, T., Alderson, L. J., Kruger, T., Hall, M. J., Greenslade, A. F. C., Shortall, C. R. and Bell, J. R. 2020. Population genetic structure and predominance of cyclical parthenogenesis in the bird cherry–oat aphid Rhopalosiphum padi in England. Evolutionary Applications. https://doi.org/10.1111/eva.12917

Optimizing farmyard manure and cattle slurry applications for intensively managed grasslands based on UK-DNDC model simulations

A - Papers appearing in refereed journals
Shah, S. H. H., Li, Y., Wang, J. and Collins, A. L. 2020. Optimizing farmyard manure and cattle slurry applications for intensively managed grasslands based on UK-DNDC model simulations. Science of the Total Environment. 714, p. 136672. https://doi.org/10.1016/j.scitotenv.2020.136672

Meta-analysis of global livestock urine-derived nitrous oxide emissions from agricultural soils.

A - Papers appearing in refereed journals
Lopez, M., Horrocks, C. A., Charteris, A., Marsden, K. A., Ciganda, V. S., Evans, J., Chadwick, D. R. and Cardenas, L. M. 2020. Meta-analysis of global livestock urine-derived nitrous oxide emissions from agricultural soils. Global Change Biology. 26 (4), pp. 2002-2013. https://doi.org/10.1111/gcb.15012

Assessment of nitrogen uptake and biological nitrogen fixation responses of soybean to nitrogen fertiliser with SPACSYS

A - Papers appearing in refereed journals
Wu, L., Misselbrook, T. H., L. Feng and Wu, L. 2020. Assessment of nitrogen uptake and biological nitrogen fixation responses of soybean to nitrogen fertiliser with SPACSYS. Sustainability. 12 (15), p. 5921. https://doi.org/10.3390/su12155921

Identification of semiochemicals from cowpea, Vigna unguiculata, for low-input management of the Legume Pod Borer, Maruca vitrata

A - Papers appearing in refereed journals
Osei-Owusu, J., Vuts, J., Caulfield, J. C., Woodcock, C. M., Withall, D., Hooper, A. M., Osafo-Acquaah, S. and Birkett, M. A. 2020. Identification of semiochemicals from cowpea, Vigna unguiculata, for low-input management of the Legume Pod Borer, Maruca vitrata. Journal of Chemical Ecology. 46, pp. 288-298. https://doi.org/10.1007/s10886-020-01149-7

Above- and below-ground assessment of carabid community responses to crop type and tillage

A - Papers appearing in refereed journals
Jowett, K., Milne, A. E., Garrett, D., Potts, S. G., Senapathi, D. and Storkey, J. 2020. Above- and below-ground assessment of carabid community responses to crop type and tillage. Agricultural and Forest Entomology. https://doi.org/10.1111/afe.12397

Spatial mapping of the provenance of storm dust: Application of data mining and ensemble modelling

A - Papers appearing in refereed journals
Gholami, G., Mohamadifar, A. and Collins, A. L. 2020. Spatial mapping of the provenance of storm dust: Application of data mining and ensemble modelling. Atmospheric Research. 233 (104716). https://doi.org/10.1016/j.atmosres.2019.104716

Soil degradation and recovery – changes in organic matter fractions and structural stability

A - Papers appearing in refereed journals
Jensen, J. L., Schjonning, P., Watts, C. W., Christensen, B. T, Obour, P. B. and Munkholm, L. J. 2020. Soil degradation and recovery – changes in organic matter fractions and structural stability . Geoderma. 364, p. 114181. https://doi.org/10.1016/j.geoderma.2020.114181

Top of the Crops. Has the EU got it wrong on genetically modified and gene edited crops?

G - Articles in popular magazines and other technical publications
Halford, N. G. 2020. Top of the Crops. Has the EU got it wrong on genetically modified and gene edited crops? The Actuary. January/February 2020, pp. 20-21.

Nutritional enhancement in plants – green and greener

A - Papers appearing in refereed journals
Napier, J. A. and Sayanova, O. V. 2020. Nutritional enhancement in plants – green and greener. Current Opinion in Biotechnology. 61 (February), pp. 122-127. https://doi.org/10.1016/j.copbio.2019.12.010

Investigating the effects of inter-annual weather variation (1968-2016) on the functional response of cereal grain yield to applied nitrogen, using data from the Rothamsted Long-Term Experiments

A - Papers appearing in refereed journals
Addy, J., Ellis, R. H., Macdonald, A. J., Semenov, M. A. and Mead, A. 2020. Investigating the effects of inter-annual weather variation (1968-2016) on the functional response of cereal grain yield to applied nitrogen, using data from the Rothamsted Long-Term Experiments. Agricultural and Forest Meteorology. 284, p. 107898. https://doi.org/10.1016/j.agrformet.2019.107898

Linking small-scale flight manoeuvers and density profiles to the vertical movement of insects in the nocturnal stable boundary layer

A - Papers appearing in refereed journals
Wainwright, C. E., Reynolds, D. R. and Reynolds, A. M. 2020. Linking small-scale flight manoeuvers and density profiles to the vertical movement of insects in the nocturnal stable boundary layer. Scientific Reports. 10, p. 1019. https://doi.org/10.1038/s41598-020-57779-0

Loss of TaIRX9b gene function in wheat decreases chain length and amount of arabinoxylan in grain but increases cross-linking

A - Papers appearing in refereed journals
Pellny, T. K., Wood, A., Freeman, J., Halsey, K., Plummer, A., Kosik, O., Shewry, P. R., Lovegrove, A., Phillips, A. L. and Mitchell, R. A. C. 2020. Loss of TaIRX9b gene function in wheat decreases chain length and amount of arabinoxylan in grain but increases cross-linking. Plant Biotechnology Journal. pp. 1-12. https://doi.org/10.1111/pbi.13393

Soil organic carbon, extracellular polymeric substances (EPS), and soil structural stability as affected by previous and current land-use

A - Papers appearing in refereed journals
Redmile-Gordon, M. A., Watts, C. W., Gregory, A. S. and White, R. P. 2020. Soil organic carbon, extracellular polymeric substances (EPS), and soil structural stability as affected by previous and current land-use. Geoderma. 363 (1st April), p. 114143. https://doi.org/10.1016/j.geoderma.2019.114143

Paleoclimatic fingerprints of ferromanganese nodules in subtropical Chinese soils identified by synchrotron radiation-based microprobes

A - Papers appearing in refereed journals
Yu, X., Wang, Y., Zhou, G., Peng, G., Brookes, P. C. and Lu, S. 2020. Paleoclimatic fingerprints of ferromanganese nodules in subtropical Chinese soils identified by synchrotron radiation-based microprobes. Chemical Geology. 531, p. 119357. https://doi.org/10.1016/j.chemgeo.2019.119357

Epigenetic patterns within the haplotype phased fig (Ficus carica L.) genome

A - Papers appearing in refereed journals
Usai, G., Mascagni, F., Giordani, T., Vangelisti, A., Bose, E., Zuccolo, A., Ceccarelli, M., King, R., Hassani-Pak, K., Zambrano, L. S., Cavallini, A. and Natali, L. 2020. Epigenetic patterns within the haplotype phased fig (Ficus carica L.) genome. The Plant Journal. https://doi.org/10.1111/tpj.14635

Percolation theory applied to soil tomography

A - Papers appearing in refereed journals
Soto-Gomez, D., Vázquez Juiz, L., Perez-Rodriguez, Lopez Periago, J.E., Paradelo, M. and Koestel, J. 2020. Percolation theory applied to soil tomography. Geoderma. 357, p. 113959. https://doi.org/10.1016/j.geoderma.2019.113959

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