Rothamsted Research

TitleRothamsted Research
TypeInstitute

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Modulation and manipulation of plant defences by Mycosphaerella graminicola during wheat infection

C2 - Non-edited contributions to conferences
Kanyuka, K., Lee, W-S., Hammond-Kosack, K. E. and Rudd, J. J. 2013. Modulation and manipulation of plant defences by Mycosphaerella graminicola during wheat infection. Abstracts 12th International Wheat Genetics Symposium (IWGS), Yokohama, 8-14 September 2013 .

Effects of monitoring position and time of day on pollen beetle numbers in crops of oilseed rape

C1 - Edited contributions to conferences/learned societies
Kaasik, R., Watts, N. P., Murray, D. A., Veromann, E. and Cook, S. M. 2013. Effects of monitoring position and time of day on pollen beetle numbers in crops of oilseed rape. Proceedings of the meeting at the Georg-August-University, Göttingen, Germany, 04 - 06 October, 2011 (Working Group "Integrated Control in Oilseed Crops").. IOBC.

Comparing the performance of two decision-support systems for management of pollen beetles in oilseed rape in the UK

C1 - Edited contributions to conferences/learned societies
Ferguson, A. W., Johnen, A., Bardsley, E., Von Richthofen, J-S., Skellern, M. P., Watts, N. P. and Cook, S. M. 2013. Comparing the performance of two decision-support systems for management of pollen beetles in oilseed rape in the UK. IOBC.

Adaptation to acidic soil is achieved by increased numbers of cis-acting elements regulating ALMT1 expression in Holcus lanatus

A - Papers appearing in refereed journals
Chen, Z. C., Yokosho, K., Kashino, M., Zhao, F-J., Yamaji, N. and Ma, J. F. 2013. Adaptation to acidic soil is achieved by increased numbers of cis-acting elements regulating ALMT1 expression in Holcus lanatus. The Plant Journal. 76 (1), pp. 10-23. https://doi.org/10.1111/tpj.12266

Expression analysis of abscisic acid (ABA) and metabolic signalling factors in developing endosperm and embryo of barley

A - Papers appearing in refereed journals
Chen, Z., Huang, J., Muttucumaru, N., Powers, S. J. and Halford, N. G. 2013. Expression analysis of abscisic acid (ABA) and metabolic signalling factors in developing endosperm and embryo of barley. Journal of Cereal Science. 58, pp. 255-262. https://doi.org/10.1016/j.jcs.2013.06.009

Determination of the gas diffusion coefficient of a peat grassland soil

A - Papers appearing in refereed journals
Boon, A., Robinson, J. S., Nightingale, P. D., Cardenas, L. M., Chadwick, D. R. and Verhoef, A. 2013. Determination of the gas diffusion coefficient of a peat grassland soil. European Journal of Soil Science. 64 (5), pp. 681-687. https://doi.org/10.1111/ejss.12056

Does wheat make us fat and sick?

A - Papers appearing in refereed journals
Brouns, F. J. P. H., Van Buul, V. J. and Shewry, P. R. 2013. Does wheat make us fat and sick? Journal of Cereal Science. 58, pp. 209-215. https://doi.org/10.1016/j.jcs.2013.06.002

New technologies reduce greenhouse gas emissions from nitrogenous fertilizer in China

A - Papers appearing in refereed journals
Zhang, W-F., Dou, Z-X., He, P., Ju, X-T., Powlson, D. S., Chadwick, D. R., Norse, D., Lu, Y-L., Zhang, Y., Wu, Liang, Chen, X-P., Cassman, K. G. and Zhang, F-S. 2013. New technologies reduce greenhouse gas emissions from nitrogenous fertilizer in China. Proceedings of the National Academy of Sciences. 110 (21), pp. 8375-8380. https://doi.org/10.1073/pnas.1210447110

Transcriptome profiling of the whitefly Bemisia tabaci reveals stage-specific gene expression signatures for thiamethoxam resistance

A - Papers appearing in refereed journals
Yang, N., Xie, W., Jones, C. M., Bass, C., Jiao, X., Yang, X., Liu, B., Li, R. and Zhang, Y. 2013. Transcriptome profiling of the whitefly Bemisia tabaci reveals stage-specific gene expression signatures for thiamethoxam resistance. Insect Molecular Biology. 22 (5), pp. 485-496. https://doi.org/10.1111/imb.12038

Sustainable agriculture and greenhouse gas emissions

B - Book chapters etc edited externally
West, J. S. 2013. Sustainable agriculture and greenhouse gas emissions. in: Korres, N. E., O'Kiely, P., Benzie, J. A. H. and West, J. S. (ed.) Bioenergy production by anaerobic digestion Routledge. pp. 3-7

Review of the strategies for the comprehensive food and feed safety and nutritional assessment of GM plants per se. EFSA supporting publication 2013: EN-480

D1 - Technical reports: non-confidential
Tompkins, S., Hudson, E., Gimson, A., Halford, N. G., Weightman, R., Shewry, P. R., Wagstaff, C., Commane, D. and Lyne, A. 2013. Review of the strategies for the comprehensive food and feed safety and nutritional assessment of GM plants per se. EFSA supporting publication 2013: EN-480. European Food Safety Authority, Parma.

Acrylamide concentrations in potato crisps in Europe from 2002 to 2011

A - Papers appearing in refereed journals
Powers, S. J., Mottram, D. S., Curtis, A. and Halford, N. G. 2013. Acrylamide concentrations in potato crisps in Europe from 2002 to 2011. Food Additives and Contaminants. 30 (9), pp. 1493-1500. https://doi.org/10.1080/19440049.2013.805439

Effects of a urease inhibitor and aluminium chloride alone or combined with a nitrification inhibitor on gaseous N emissions following soil application of cattle urine

A - Papers appearing in refereed journals
Pereira, J., Barneze, A. S., Misselbrook, T. H., Coutinho, J., Moreira, N. and Trindade, H. 2013. Effects of a urease inhibitor and aluminium chloride alone or combined with a nitrification inhibitor on gaseous N emissions following soil application of cattle urine. Biosystems Engineering. 115, pp. 396-407. https://doi.org/10.1016/j.biosystemseng.2013.05.002

Abnormal glycosphingolipid mannosylation triggers salicylic acid-mediated responses in Arabidopsis

A - Papers appearing in refereed journals
Mortimer, J. C., Yu, X., Albrecht, S., Sicilia, F., Huichalaf, M., Ampuero, D., Michaelson, L. V., Murphy, A. M., Matsunaga, T., Kurz, S., Stephens, E., Baldwin, T. C., Ishii, T., Napier, J. A., Weber, A. P. M., Handford, M. G. and Dupree, P. 2013. Abnormal glycosphingolipid mannosylation triggers salicylic acid-mediated responses in Arabidopsis. The Plant Cell. 25, pp. 1881-1894. https://doi.org/10.1105/tpc.113.111500

Wavelet analysis of the variability of nitrous oxide emissions from soil at decameter to kilometer scales

A - Papers appearing in refereed journals
Milne, A. E., Haskard, K. A., Webster, C. P., Truan, I. A., Goulding, K. W. T. and Lark, R. M. 2013. Wavelet analysis of the variability of nitrous oxide emissions from soil at decameter to kilometer scales. Journal of Environmental Quality. 42, pp. 1070-1079. https://doi.org/10.2134/jeq2012.0007

Plant sphingolipids: function follows form

A - Papers appearing in refereed journals
Markham, J. E., Lynch, D. V., Napier, J. A., Dunn, T. M. and Cahoon, E. B. 2013. Plant sphingolipids: function follows form. Current Opinion in Plant Biology. 16, pp. 350-357. https://doi.org/10.1016/j.pbi.2013.02.009

The challenges and implications of linking wetland science to policy in agricultural landscapes - experience from the UK National Ecosystem Assessment

A - Papers appearing in refereed journals
Maltby, E., Acreman, M., Blackwell, M. S. A., Everard, M. and Morris, J. 2013. The challenges and implications of linking wetland science to policy in agricultural landscapes - experience from the UK National Ecosystem Assessment. Ecological Engineering. 56, pp. 121-133. https://doi.org/10.1016/j.ecoleng.2012.12.086

A long term genotypic analysis of Scottish peach-potato aphids: what has happened to the Braveheart clone?

C1 - Edited contributions to conferences/learned societies
Malloch, G., Pickup, J., Highet, F., Foster, S. P. and Fenton, B. 2013. A long term genotypic analysis of Scottish peach-potato aphids: what has happened to the Braveheart clone? Proceedings Crop Protection in Northern Britain 2012, Dundee, 28-29 February 2012 . pp. 243-248

A review of the effects of crop agronomy on the management of Alopecurus myosuroides

A - Papers appearing in refereed journals
Lutman, P. J. W., Moss, S. R., Cook, S. and Welham, S. J. 2013. A review of the effects of crop agronomy on the management of Alopecurus myosuroides. Weed Research. 53 (5), pp. 299-313. https://doi.org/10.1111/wre.12024

RNA interference suppression of genes in glycosyl transferase families 43 and 47 in wheat starchy endosperm causes large decreases in arabinoxylan content

A - Papers appearing in refereed journals
Lovegrove, A., Wilkinson, M. D., Freeman, J., Pellny, T. K., Tosi, P., Saulnier, L., Shewry, P. R. and Mitchell, R. A. C. 2013. RNA interference suppression of genes in glycosyl transferase families 43 and 47 in wheat starchy endosperm causes large decreases in arabinoxylan content. Plant Physiology. 163, pp. 95-107. https://doi.org/10.1104/pp.113.222653

Bioenergy production by anaerobic digestion: using agricultural biomass and organic wastes

E - Books edited/written by staff member, alone/with others
Korres, N. E., O'Kiely, P., Benzie, J. A. H. and West, J. S. 2013. Bioenergy production by anaerobic digestion: using agricultural biomass and organic wastes. Routledge Abingdon.

Prevalence and infection intensity of sea lice (Lepeophtheirus salmonis) on Atlantic salmon (Salmo salar) host is reduced by the non-host compound 2-aminoacetophenone

A - Papers appearing in refereed journals
Hastie, L. C., Wallace, C., Birkett, M. A., Douglas, A., Jones, O., Mordue (Luntz), A. J., Ritchie, G., Pickett, J. A., Webster, J. L. and Bowman, A. S. 2013. Prevalence and infection intensity of sea lice (Lepeophtheirus salmonis) on Atlantic salmon (Salmo salar) host is reduced by the non-host compound 2-aminoacetophenone. Aquaculture. 410-411, pp. 178-183. https://doi.org/10.1016/j.aquaculture.2013.06.035

Identification and expression profiling of odorant binding proteins and chemosensory proteins between two wingless morphs and a winged morph of the cotton aphid Aphis gossypii Glover

A - Papers appearing in refereed journals
Gu, S-H., Wu, K-M., Guo, Y-Y., Field, L. M., Pickett, J. A., Zhang, Y-J. and Zhou, J-J. 2013. Identification and expression profiling of odorant binding proteins and chemosensory proteins between two wingless morphs and a winged morph of the cotton aphid Aphis gossypii Glover. PLOS ONE. 8, p. e73524 (15pp). https://doi.org/10.1371/journal.pone.0073524

The influence of harvest and storage on the properties of and fast pyrolysis products from Miscanthus giganteus

A - Papers appearing in refereed journals
Greenhalf, C. E., Nowakowski, D. J., Yates, N. E., Shield, I. F. and Bridgwater, A. V. 2013. The influence of harvest and storage on the properties of and fast pyrolysis products from Miscanthus giganteus. Biomass & Bioenergy. 56, pp. 247-259. https://doi.org/10.1016/j.biombioe.2013.05.007

Do asexual morphs of the peach-potato aphid, Myzus persicae, utilise the aphid sex pheromone? Behavioural and electrophysiological responses of M. persicae virginoparae to (4aS,7S,7aR)-nepetalactone and its effect on aphid performance

A - Papers appearing in refereed journals
Fernandez-Grandon, G. M., Woodcock, C. M. and Poppy, G. M. 2013. Do asexual morphs of the peach-potato aphid, Myzus persicae, utilise the aphid sex pheromone? Behavioural and electrophysiological responses of M. persicae virginoparae to (4aS,7S,7aR)-nepetalactone and its effect on aphid performance. Bulletin of Entomological Research. 103, pp. 466-472. https://doi.org/10.1017/S0007485313000126

What do we need to know to enhance the environmental sustainability of agricultural production? A prioritisation of knowledge needs for the UK food system

A - Papers appearing in refereed journals
Dicks, L. V., Bardgett, R. D., Bell, J., Benton, T. G., Booth, A., Bouwman, J., Brown, C., Bruce, A., Burgess, P. J., Butler, S. J., Crute, I. R., Dixon, F., Drummond, C., Freckleton, R. P., Gill, M., Graham, A., Hails, R. S., Hallett, J., Hart, B., Hillier, J., Holland, J. M., Huxley, J., Ingram, J. S. I., King, V., MacMillan, T., Mcgonigle, D. F., McQuaid, C. F., Nevard, T., Norman, S., Norris, K., Pazderka, C., Poonaji, I., Quinn, C. H., Ramsden, S. J., Sinclair, D., Siriwardena, G. M., Vickery, J. A., Whitmore, A. P., Wolmer, W. and Sutherland, W. J. 2013. What do we need to know to enhance the environmental sustainability of agricultural production? A prioritisation of knowledge needs for the UK food system. Sustainability. 5 (7), pp. 3095-3115. https://doi.org/10.3390/su5073095

Detection and molecular characterisation of Pyrenopeziza brassicae isolates resistant to methyl benzimidazole carbamates

A - Papers appearing in refereed journals
Carter, H. E., Cools, H. J., West, J. S., Shaw, M. W. and Fraaije, B. A. 2013. Detection and molecular characterisation of Pyrenopeziza brassicae isolates resistant to methyl benzimidazole carbamates. Pest Management Science. 69 (9), pp. 1040-1048. https://doi.org/10.1002/ps.3585

Potential mineralization and nitrification in volcanic grassland soils in Chile

A - Papers appearing in refereed journals
Cardenas, L. M., Hatch, D. J., Scholefield, D., Jhurreea, D., Clark, I. M., Hirsch, P. R., Salazar, F., Rao-Ravella, S. and Alfaro, M. 2013. Potential mineralization and nitrification in volcanic grassland soils in Chile. Soil Science and Plant Nutrition. 59, pp. 380-391. https://doi.org/10.1080/00380768.2013.789395

Identification and exploitation of effectors from barley fungal pathogen Rhynchosporium commune

C2 - Non-edited contributions to conferences
Avrova, A., Gamble, L., Griffe, L., Ruiz, O., Munsterkotter, M., Knogge, W., Newton, A., Birch, P., Hammond-Kosack, K. E. and Kanyuka, K. 2013. Identification and exploitation of effectors from barley fungal pathogen Rhynchosporium commune. Abstracts 1st Annual Meeting COST Action FA 1208 Pathogen-informed Strategies for Sustainable Broad-Spectrum Crop Resistance, Birnam, 9-11 October 2013 .

Variation in arsenic methylation in soils and rice plants

C2 - Non-edited contributions to conferences
Zhao, F-J., Harris, E., Yan, J., Ma, J., Wu, Liyou, Liu, W., McGrath, S. P., Zhou, J. and Zhu, Y-G. 2013. Variation in arsenic methylation in soils and rice plants. Abstracts 12th International Conference on the Biogeochemistry of Trace Elements, Athens, Georgia, 16-20 June 2013 .

Arsenic methylation in soils and its relationship with microbial arsM abundance and diversity, and as speciation in rice

A - Papers appearing in refereed journals
Zhao, F-J., Harris, E., Yan, J., Ma, J., Wu, Liyou, Liu, W., McGrath, S. P., Zhou, J. and Zhu, Y-G. 2013. Arsenic methylation in soils and its relationship with microbial arsM abundance and diversity, and as speciation in rice. Environmental Science & Technology. 47, pp. 7147-7154. https://doi.org/10.1021/es304977m

Differential expression patterns in chemosensory and non-chemosensory tissues of putative chemosensory genes identified by transcriptome analysis of insect pest the purple stem borer Sesamia inferens (Walker)

A - Papers appearing in refereed journals
Zhang, Y-N., Jin, J-Y., Jin, R., Xia, Y-H., Zhou, J-J., Deng, J-Y. and Dong, S-L. 2013. Differential expression patterns in chemosensory and non-chemosensory tissues of putative chemosensory genes identified by transcriptome analysis of insect pest the purple stem borer Sesamia inferens (Walker). PLOS ONE. 8, p. e69715. https://doi.org/10.1371/journal.pone.0069715

MS-desi, a desiccation-related protein in the floral nectar of the evergreen velvet bean (Mucuna sempervirens Hemsl): molecular identification and characterization

A - Papers appearing in refereed journals
Zha, H-G., Liu, T., Zhou, J-J. and Sun, H. 2013. MS-desi, a desiccation-related protein in the floral nectar of the evergreen velvet bean (Mucuna sempervirens Hemsl): molecular identification and characterization. Planta. 238, pp. 77-89. https://doi.org/10.1007/s00425-013-1876-2

Soil mechanical resistance and root growth and function

B - Book chapters etc edited externally
Whalley, W. R. and Bengough, A. G. 2013. Soil mechanical resistance and root growth and function. in: Beeckman, T. and Eshel, A. (ed.) Plant roots: the hidden half, 4th ed CRC Press, Boca Raton, Florida. pp. 37.1-37.15

Specific involvement of two amino acid residues in cis -nerolidol binding to odorant-binding protein 5 AlinOBP5 in the alfalfa plant bug, Adelphocoris lineolatus (Goeze)

A - Papers appearing in refereed journals
Wang, S-Y., Gu, S-H., Han, L., Guo, Y-Y., Zhou, J-J. and Zhang, Y-J. 2013. Specific involvement of two amino acid residues in cis -nerolidol binding to odorant-binding protein 5 AlinOBP5 in the alfalfa plant bug, Adelphocoris lineolatus (Goeze). Insect Molecular Biology. 22 (2), pp. 172-182. https://doi.org/10.1111/imb.12012

Identification and characterization of pheromone receptors and interplay between receptors and pheromone binding proteins in the diamondback moth, Plutella xyllostella

A - Papers appearing in refereed journals
Sun, M., Liu, Y., Walker, W. B., Liu, C., Lin, K., Gu, S., Zhang, Y., Zhou, J-J. and Wang, G. 2013. Identification and characterization of pheromone receptors and interplay between receptors and pheromone binding proteins in the diamondback moth, Plutella xyllostella. PLOS ONE. 8, p. e62098. https://doi.org/10.1371/journal.pone.0062098

Investigating the beneficial traits of Trichoderma hamatum GD12 for sustainable agriculture - insights from genomics

A - Papers appearing in refereed journals
Studholme, D. J., Harris, B., Le Cocq, K., Winsbury, R., Perera, V., Ryder, L., Ward, J. L., Beale, M. H., Thornton, C. R. and Grant, M. 2013. Investigating the beneficial traits of Trichoderma hamatum GD12 for sustainable agriculture - insights from genomics. Frontiers in Plant Science. 4, p. 258 (13pp). https://doi.org/10.3389/fpls.2013.00258

Validation of ELPIS 1980-2010 baseline scenarios using the observed European Climate Assessment data set

A - Papers appearing in refereed journals
Semenov, M. A., Pilkington-Bennett, S. and Calanca, P. 2013. Validation of ELPIS 1980-2010 baseline scenarios using the observed European Climate Assessment data set. Climate Research. 57, pp. 1-9. https://doi.org/10.3354/cr01164

Variation in rice cadmium related to human exposure

A - Papers appearing in refereed journals
Meharg, A. A., Norton, G., Deacon, C., Williams, P., Adomako, E. E., Price, A., Zhu, Y., Li, G., Zhao, F-J., McGrath, S. P., Villada, A., Sommella, A., De Silva, P. M. C. S., Brammer, H., Dasgupta, T. and Islam, M. R. 2013. Variation in rice cadmium related to human exposure. Environmental Science & Technology. 47, pp. 5613-5618. https://doi.org/10.1021/es400521h

Fluctuations in method-of-moments variograms caused by clustered sampling and their elimination by declustering and residual maximum likelihood estimation

A - Papers appearing in refereed journals
Marchant, B. P., Viscarra Rossel, R. A. and Webster, R. 2013. Fluctuations in method-of-moments variograms caused by clustered sampling and their elimination by declustering and residual maximum likelihood estimation. European Journal of Soil Science. 64 (4), pp. 401-409. https://doi.org/10.1111/ejss.12029

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