Rothamsted Research

Title	Rothamsted Research
Type	Institute

Outputs

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Accounting for environmental variation in the free asparagine content of wheat grain

A - Papers appearing in refereed journals

Oddy, J., Elmore, S. and Halford, N. G. 2023. Accounting for environmental variation in the free asparagine content of wheat grain. Journal of Food Composition and Analysis. 120, p. 105333. https://doi.org/10.1016/j.jfca.2023.105333

A chromatographic and immunoprofiling approach to optimising workflows for extraction of gluten proteins from flour

A - Papers appearing in refereed journals

Daly, M., Huang, X., Nitride, C., Tranquet, O., Rogers, A., Shewry, P. R., Gethings, L. A. and Mills, E. N. C. 2023. A chromatographic and immunoprofiling approach to optimising workflows for extraction of gluten proteins from flour. Journal Of Chromatography B. 1215, p. 123554. https://doi.org/10.1016/j.jchromb.2022.123554

Indirect Evidence Based on Mating-Type Ratios for the Role of Sexual Reproduction in European and Chinese Populations of Plenodomus biglobosus (Blackleg of Oilseed Rape)

A - Papers appearing in refereed journals

King, K. M., Canning, G., Zhou, K., Liu, Z., Wu, M. and West, J. S. 2023. Indirect Evidence Based on Mating-Type Ratios for the Role of Sexual Reproduction in European and Chinese Populations of Plenodomus biglobosus (Blackleg of Oilseed Rape). Pathogens. 12 (1), p. 3. https://doi.org/10.3390/pathogens12010003

Engineering plant-based feedstocks for sustainable aquaculture

A - Papers appearing in refereed journals

Napier, J. A. and Betancor, M. B. 2023. Engineering plant-based feedstocks for sustainable aquaculture. Current Opinion in Plant Biology. 71, p. 102323. https://doi.org/10.1016/j.pbi.2022.102323

Reducing dietary acrylamide exposure from wheat products through crop management and imaging

A - Papers appearing in refereed journals

Oddy, J., Addy, J., Mead, A., Hall, C., Mackay, C., Ashfield, T., Mcdiarmid, F., Curtis, T. Y., Raffan, S., Wilkinson, M. D., Elmore, J. S., Cryer, N., Moreira de Almeida, I. and Halford, N. G. 2023. Reducing dietary acrylamide exposure from wheat products through crop management and imaging. Journal of Agricultural and Food Chemistry. 71 (7), pp. 3403-3413. https://doi.org/10.1021/acs.jafc.2c07208

Spaces between insects in laboratory swarms move like insects in natural swarms

A - Papers appearing in refereed journals

Reynolds, A. M. 2023. Spaces between insects in laboratory swarms move like insects in natural swarms. EPL. 141 (1), p. 17001. https://doi.org/10.1209/0295-5075/acab7c

Genetic variation of Amaranthus retroflexus L. and Chenopodium album L. (Amaranthaceae) suggests multiple independent introductions into Iran

A - Papers appearing in refereed journals

Moghadam, S. H., Alebrahim, M. T., Mohebodini, M. and Macgregor, D. 2023. Genetic variation of Amaranthus retroflexus L. and Chenopodium album L. (Amaranthaceae) suggests multiple independent introductions into Iran. Frontiers in Plant Science. 13, p. 1024555. https://doi.org/10.3389/fpls.2022.1024555

Optimal control of organic matter applications

A - Papers appearing in refereed journals

Putelat, T. and Whitmore, A. P. 2023. Optimal control of organic matter applications . European Journal of Agronomy. 143, p. 126713. https://doi.org/10.1016/j.eja.2022.126713

Linking Legacies: Realising the Potential of the Rothamsted Long-Term Agricultural Experiments

B - Book chapters etc edited externally

Ostler, R., Castells-Brooke, N. I. D., Glendining, M. J. and Perryman, S. A. M. 2023. Linking Legacies: Realising the Potential of the Rothamsted Long-Term Agricultural Experiments. in: Williamson, H. F. and Leonelli, S. (ed.) Towards Responsible Plant Data Linkage: Data Challenges for Agricultural Research and Development Springer. pp. 125-147

Sediment source apportionment using geochemical composite signatures in a large and polluted river system with a semiarid-coastal interface, Brazil

A - Papers appearing in refereed journals

Nascimento, R. C., Maia, A .J., Agra Bezerra da Silva, Y. J., Amorim, F. F., Williams Araújo do Nascimento, C., Tiecher, T., Evrard, O., Collins, A. L., Biondi, C. M. and Agra Bezerra da Silva, Y. J. 2023. Sediment source apportionment using geochemical composite signatures in a large and polluted river system with a semiarid-coastal interface, Brazil. Catena. 220, Part B, p. 106710. https://doi.org/10.1016/j.catena.2022.106710

A framework for community curation of interspecies interactions literature

A - Papers appearing in refereed journals

Cuzick, A., Seager, J., Wood, V., Urban, M., Rutherford, K. and Hammond-Kosack, K. E. 2023. A framework for community curation of interspecies interactions literature. eLife. 12, p. e84658. https://doi.org/10.7554/eLife.84658

Genetic control of grain amino acid composition in a UK soft wheat mapping population

A - Papers appearing in refereed journals

Oddy, J., Chhetry, M., Awal, R., Addy, J., Wilkinson, M. D., Smith, D., King, R., Hall, C., Testa, R., Murray, E., Raffan, S., Curtis, T. Y., Wingen, L., Griffiths, S., Berry, S., Elmore, S. J., Cryer, N., Moreira de Almeida, I. and Halford, N. G. 2023. Genetic control of grain amino acid composition in a UK soft wheat mapping population. The Plant Genome. 16 (4), p. e20335. https://doi.org/10.1002/tpg2.20335

Meiotic chromosome organization and its role in recombination and cancer

A - Papers appearing in refereed journals

Morgan, C., Nayak, A., Hosoya, N., Smith, G. R. and Lambing, C. 2023. Meiotic chromosome organization and its role in recombination and cancer. Current topics in developmental biology. 151 (chpt 5), pp. 91-126. https://doi.org/10.1016/bs.ctdb.2022.04.008

Response of three cereal crops in continuous arable or ley-arable rotations to fertiliser nitrogen and soil nitrogen at Rothamsted's Woburn Ley-arable experiment

A - Papers appearing in refereed journals

Poulton, P. R., Johnston, A. E. and White, R. P. 2023. Response of three cereal crops in continuous arable or ley-arable rotations to fertiliser nitrogen and soil nitrogen at Rothamsted's Woburn Ley-arable experiment. Soil Use and Management. 39 (2), pp. 771-784. https://doi.org/10.1111/sum.12872

(Un)willingness to contribute financially towards advice surrounding diffuse water pollution - the perspectives of farmers and advisors

A - Papers appearing in refereed journals

Chivers, C. and Collins, A. L. 2023. (Un)willingness to contribute financially towards advice surrounding diffuse water pollution - the perspectives of farmers and advisors. The Journal of Agricultural Education and Extension. 29 (3), pp. 327-350. https://doi.org/10.1080/1389224X.2022.2043917

Arable soil nitrogen dynamics reflect organic inputs via the extended composite phenotype

A - Papers appearing in refereed journals

Neal, A. L., Barrat, H., Bacq-Lebreuil, A., Qin, Y., Zhang, X., Takahashi, T., Rubio, V., Hughes, D. J., Clark, I. M., Cardenas, L. M., Gardiner, L., Krishna, R., Glendining, M. J., Ritz, K., Mooney, S. and Crawford, J. W. 2023. Arable soil nitrogen dynamics reflect organic inputs via the extended composite phenotype. Nature Food. 4, pp. 51-60. https://doi.org/10.1038/s43016-022-00671-z

A point mutation in the kinase domain of CRK10 leads to xylem vessel collapse and activation of defence responses in Arabidopsis

A - Papers appearing in refereed journals

Piovesana, M., Wood, A. K. M., Smith, D. P., Deery, M. J., Bayliss, R., Carrera, E., Napier, J. A., Kurup, S. and Matthes, M. C. 2023. A point mutation in the kinase domain of CRK10 leads to xylem vessel collapse and activation of defence responses in Arabidopsis. Journal of Experimental Botany. 74 (10), pp. 3104-3121. https://doi.org/10.1093/jxb/erad080

Statistical inferential testing

A - Papers appearing in refereed journals

Webster, R. 2023. Statistical inferential testing. Encyclopedia of Mathematical Geosciences. pp. 1439-1443. https://doi.org/10.1007/978-3-030-85040-1_459

Unbalanced analysis of variance

B - Book chapters etc edited externally

Webster, R. 2023. Unbalanced analysis of variance. in: Daya Sagar, B. S, Cheng, Q., McKinley, J. and Agterberg, F. (ed.) Encyclopedia of Mathematical Geosciences Springer. pp. 1579-1583

Understanding the Representation of Pastoralism in Livestock-Related Climate Adaptation Policies in Ghana and Nigeria: a Review of Key Policy Documents

A - Papers appearing in refereed journals

Tinsley, J. and Gwiriri, L. Understanding the Representation of Pastoralism in Livestock-Related Climate Adaptation Policies in Ghana and Nigeria: a Review of Key Policy Documents. Nomadic Peoples. 26 (1). https://doi.org/10.3197/np.2022.260105

Uniting RNAi Technology and Conservation Biocontrol to Promote Global Food Security and Agrobiodiversity

A - Papers appearing in refereed journals

Willow, J., Cook, S. M., Veromann, E and Smagghe, G 2022. Uniting RNAi Technology and Conservation Biocontrol to Promote Global Food Security and Agrobiodiversity. Frontiers in Bioengineering and Biotechnology. 10, p. 871651. https://doi.org/10.3389/fbioe.2022.871651

Utilising Ecology and Molecular Techniques to Identify Alternative Hosts, Green Bridges, and Population Structure of a Serious Aphid Pest

PhD Thesis

Garrett, D. 2022. Utilising Ecology and Molecular Techniques to Identify Alternative Hosts, Green Bridges, and Population Structure of a Serious Aphid Pest. PhD Thesis Rothamsted Research Rothamsted Insect Survey

Robust counterselection and advanced λRed recombineering enable markerless chromosomal integration of large heterologous constructs

A - Papers appearing in refereed journals

Bubnov, D. M., Yuzbashev, T., Khozov, A. A., Melkina, O. E., Vybornaya, T. V., Stan, G. and Sineoky, S. P. 2022. Robust counterselection and advanced λRed recombineering enable markerless chromosomal integration of large heterologous constructs. Nucleic Acids Research. 50 (15), pp. 8947-8960. https://doi.org/10.1093/nar/gkac649

Model the Relationship of NH3 Emission with Attributing Factors from Rice Fields in China: Ammonia Mitigation Potential Using a Urease Inhibitor

A - Papers appearing in refereed journals

Zhipeng, S., Ma, X., Wang, J., Li, Y., Xu, W., Tang, A., Goulding, K. W. T. and Liu, X. 2022. Model the Relationship of NH3 Emission with Attributing Factors from Rice Fields in China: Ammonia Mitigation Potential Using a Urease Inhibitor. Atmosphere. 13 (11), p. 1750. https://doi.org/10.3390/atmos13111750

A note on current pyrethroid susceptibility in the bird cherry-oat aphid Rhopalosiphum padi in Ireland

A - Papers appearing in refereed journals

George, A., Meally, H., Foster, S. P., Williamson, M. S., Walsh, L., Carroll, J., Gaffney, M. T. and McNamara, L. 2022. A note on current pyrethroid susceptibility in the bird cherry-oat aphid Rhopalosiphum padi in Ireland. Irish Journal of Agricultural and Food Research. 61 (12), pp. 407-411. https://doi.org/10.15212/ijafr-2022-0106

A Mutagenomic Dissection of Virulence in the Fungal Wheat Pathogen Zymoseptoria tritici

F - Theses

Blyth, H.R. 2022. A Mutagenomic Dissection of Virulence in the Fungal Wheat Pathogen Zymoseptoria tritici. F - Theses University of Nottingham Biointeractions and Crop Protection, Rothamsted Research

The fate of micronutrients in excreta of sheep supplemented with organic/inorganic micronutrients in a pasture system

F - Theses

Kao, P-T. 2022. The fate of micronutrients in excreta of sheep supplemented with organic/inorganic micronutrients in a pasture system. F - Theses University of Bristol Geology

A loss function to evaluate agricultural decision‑making under uncertainty: a case study of soil spectroscopy

A - Papers appearing in refereed journals

Breure, T., Haefele, S. M., Hannam, J. A., Corstanje, R., Webster, R., Moreno-Rojas, S. and Milne, A. E. 2022. A loss function to evaluate agricultural decision‑making under uncertainty: a case study of soil spectroscopy. Precision Agriculture. 23, pp. 1333 - 1353. https://doi.org/10.1007/s11119-022-09887-2

Communication and building social capital in community supported agriculture

A - Papers appearing in refereed journals

Furness, E., Bellamy, A. S., Clear, A., Finnigan, S. M., Meador, J. E., Mills, S., Milne, A. E. and Sharp, R. T. 2022. Communication and building social capital in community supported agriculture. Journal of Agriculture, Food Systems, and Community Development. 12 (1), pp. 63-78. https://doi.org/10.5304/jafscd.2022.121.009

A contiguous de novo genome assembly of sugar beet EL10 (Beta vulgaris L.)

A - Papers appearing in refereed journals

Mitchell McGrath, J., Funk, A., Galewski, P., Ou, S., Townsend, B. J., Davenport, K., Daligault, H., Johnson, S., Lee, J., Hastie, A., Darracq, A., Willems. G., Barnes, S., Liachko, I., Sullivan, S., Koren, S., Phillippy, A., Wang, J., Liu, T., Pulman, J., Childs, K., Shu, S., Yocum, A., Mutasa-Göttgens, E. S., Stevanato, P., Taguchi, K., Naegele, R. and Dorn, K. M. 2022. A contiguous de novo genome assembly of sugar beet EL10 (Beta vulgaris L.). DNA Research. 30 (1), p. dsac033. https://doi.org/10.1093/dnares/dsac033

Early Detection and Spread of Tomato Powdery Mildew (TPM) in Commercial Greenhouses

A - Papers appearing in refereed journals

Sokolidi, A., Webster, R., Milne, A. E., Clark, S. J., Clarkson, J., Bielik M., Morley, P. and West, J. S. 2022. Early Detection and Spread of Tomato Powdery Mildew (TPM) in Commercial Greenhouses. Phytopathology. 112 (11), pp. 49-49.

A cold high-pressure system over North China hinders the southward migration of Mythimna separata in autumn

A - Papers appearing in refereed journals

Zhu, J., Chen, X., Liu, J., Jiang, Y., Chen, F., Lu, J., Chen, H., Zhai, B., Reynolds, D. R., Chapman, J. W. and Hu, G. 2022. A cold high-pressure system over North China hinders the southward migration of Mythimna separata in autumn. Movement Ecology. 10, p. 54. https://doi.org/10.1186/s40462-022-00360-3

Oils Derived from GM Crops as Sustainable Solutions to the Supply of Long-Chain Omega-3 for On-Growing Atlantic Bluefin Tuna (Thunnus thynnus L.)

A - Papers appearing in refereed journals

Betancor, M. B., Sprague, M., Gonzalez-Silvera, D., Ortega, A., De la Gandara, F., Gong, X., Napier, J. A., Tocher, D. R. and Mourente, G. 2022. Oils Derived from GM Crops as Sustainable Solutions to the Supply of Long-Chain Omega-3 for On-Growing Atlantic Bluefin Tuna (Thunnus thynnus L.). Fishes. 7 (6), p. 366. https://doi.org/10.3390/fishes7060366

Time series canopy phenotyping enables the identification of genetic variants controlling dynamic phenotypes in soybean

A - Papers appearing in refereed journals

Li, D., Bai, D., Tian, Y., Li, Y.‐H., Zhao, C., Wang, Q., Guo, S., Luan, X., Wang, R., Yang, J., Hawkesford, M. J., Schnable, J. C., Jin, X. and Qiu, L. 2022. Time series canopy phenotyping enables the identification of genetic variants controlling dynamic phenotypes in soybean. Journal of Integrative Plant Biology. https://doi.org/10.1111/jipb.13380

Anemia in children aged 6-59 months was significantly associated with maternal anemia status in rural Zimbabwe.

A - Papers appearing in refereed journals

Mutonhodza, B., Dembedza, M. P., Lark, R. M., Joy, E. J. M., Manzeke-Kangara, M. G., Njovo, H., Nyadzayo, T. K., Kalimbira, A. A., Bailey, E. H., Broadley, M., Matsungo, T. M. and Chopera, P. 2022. Anemia in children aged 6-59 months was significantly associated with maternal anemia status in rural Zimbabwe. Food Science and Nutrition. https://doi.org/10.1002/fsn3.3157

Evidence for increasing global wheat yield potential

A - Papers appearing in refereed journals

Guarin, J. R., Martre, P., Ewert, F., Webber, H., Dueri, S., Calderini, D., Reynolds, M., Molero, G., Miralles, D., Garcia, G., Slafer, G., Giunta, F., Pequeno, D. N. L., Stella, T., Ahmed, M., Alderman, P. D., Basso, B., Berger, A. G., Bindi, M., Bracho-Mujica, G., Cammarano, D., Chen, Y., Dumont, B., Rezae, E. E., Fereres, E., Ferrise, R., Gaiser, T., Gao, Y., Garcia-Vila, M., Gayler, S., Hochman, Z., Hoogenboom, G., Hunt, L. A., Kersebaum, K. C., Nendel, C., Olesen, J. E., Palosuo, T., Priesack, E., Pullens, J. W. M., Rodríguez, A., Rötter, R. P., Ruiz Ramos, M., Semenov, M. A., Senapati, N., Siebert, S., Srivastava, A. K., Stöckle, C., Supit, I., Tao, F., Thorburn, P., Wang, E., Weber, T. K. D., Xiao, L., Zhang, Z., Zhao, C., Zhao, J., Zhao, Z., Zhu, Y. and Asseng, S. 2022. Evidence for increasing global wheat yield potential. Environmental Research Letters. 17, p. 124045. https://doi.org/10.1088/1748-9326/aca77c

Optimisation of Cereal Farm Strategies for Mitigating Externalities Associated with Intensive Production

A - Papers appearing in refereed journals

Collins, A. L. and Zhang, Y. 2022. Optimisation of Cereal Farm Strategies for Mitigating Externalities Associated with Intensive Production. Water. 15 (1), p. 169. https://doi.org/10.3390/w15010169

Protein quality as a complementary functional unit in life cycle assessment (LCA)

A - Papers appearing in refereed journals

McAuliffe, G., Takahashi, T., Beal, T., Huppertz, T., Leroy, F., Buttriss, J., Collins, A. L., Drewnowski, A., McLaren, S. J., Ortenzi, F., Van der Pols, J., Van Vliet, S. and Lee, M. R. F. 2022. Protein quality as a complementary functional unit in life cycle assessment (LCA). International Journal of Life Cycle Assessment. 28 (2), pp. 146-155. https://doi.org/10.1007/s11367-022-02123-z

A reconnaissance survey of channel bank particulate phosphorus concentrations, controls and estimated contributions to riverine loads across England

A - Papers appearing in refereed journals

Pulley, S., Zhang, Y., Copeland-Phillips, R., Vadher, A. N., Foster, I. D. L, Boardman, J. and Collins, A. L. 2022. A reconnaissance survey of channel bank particulate phosphorus concentrations, controls and estimated contributions to riverine loads across England. Hydrological Processes. 35 (12), p. e14785. https://doi.org/10.1002/hyp.14785

Identification, characterization, and rescue of CRISPR/Cas9 generated wheat SPO11-1 mutants

A - Papers appearing in refereed journals

Hyde, L., Osman, K., Winfield, M., Sanchez-Moran, E., Higgins, J. D., Henderson, I. R., Sparks, C. A., Franklin, F. C. H. and Edwards, K. 2022. Identification, characterization, and rescue of CRISPR/Cas9 generated wheat SPO11-1 mutants. Plant Biotechnology Journal. 2022, pp. 1-4. https://doi.org/10.1111/pbi.13961