Rothamsted Research

TitleRothamsted Research
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The progress of composting technologies from static heap to intelligent reactor: Benefits and limitations

A - Papers appearing in refereed journals
Liu, Z., Wang, X., Wang, F., Bai, Z., Chadwick, D. R., Misselbrook, T. H. and Ma, L. 2020. The progress of composting technologies from static heap to intelligent reactor: Benefits and limitations. Journal of Cleaner Production. 270, p. 122328. https://doi.org/10.1016/j.jclepro.2020.122328

Assessment of Animal-Based Pig Welfare Outcomes on Farm and at the Abattoir: A Case Study

A - Papers appearing in refereed journals
Teixeira, D. L., Salazar, L. C., Enriquez-Hidalgo, D. and Boyle, L. A. 2020. Assessment of Animal-Based Pig Welfare Outcomes on Farm and at the Abattoir: A Case Study. Frontiers in veterinary science. 7, p. 576942. https://doi.org/10.3389/fvets.2020.576942

Diversity of content and composition of cell wall-derived dietary fibre in polished rice

A - Papers appearing in refereed journals
Kosik, O., Romero, M. V., Bandonill, E. H., Abilgos-Ramos, R. G., Sreenivasulu, N., Shewry, P. R. and Lovegrove, A. 2020. Diversity of content and composition of cell wall-derived dietary fibre in polished rice . Journal of Cereal Science. 96, p. 103122. https://doi.org/10.1016/j.jcs.2020.103122

Effect of farm management on topsoil organic carbon and aggregate stability in water: A case study from Southwest England, UK

A - Papers appearing in refereed journals
Collier, S. M., Green, S. M., Inman, A., Hopkins, D. W., Kendall, H., Jahn, M. M. and Dungait, J. A. J. 2020. Effect of farm management on topsoil organic carbon and aggregate stability in water: A case study from Southwest England, UK. Soil Use and Management. https://doi.org/10.1111/sum.12658

Modelling Chinese grassland systems to improve herder livelihoods and grassland sustainability

A - Papers appearing in refereed journals
Behrendt, K., Takahashi, T., Kemp, D. R., Han, G., Li, Z., Wang, Z., Badgery, W. and Liu, H. 2020. Modelling Chinese grassland systems to improve herder livelihoods and grassland sustainability. Rangeland Journal. https://doi.org/10.1071/RJ20053

Overexpression of ICE1 gene in mungbean (Vigna radiata L.) for cold tolerance

A - Papers appearing in refereed journals
Rout, G. R., Bansal, A., Swain, D., Jadhao, K. R., Shelke, R. G. and Panda, S. K. 2020. Overexpression of ICE1 gene in mungbean (Vigna radiata L.) for cold tolerance. Plant Cell, Tissue and Organ Culture. https://doi.org/10.1007/s11240-020-01944-w

Evaluating the potential of different carbon sources to promote denitrification

A - Papers appearing in refereed journals
Dlamini, J. C., Chadwick, D. R., Hawkins, J. M. B., Martinez, J., Scholefield, D., Ma, Y. and Cardenas, L. M. 2020. Evaluating the potential of different carbon sources to promote denitrification. The Journal of Agricultural Science. 158 (3), pp. 194-205. https://doi.org/10.1017/S0021859620000520

Comparing Extraction Methods for Biomarker Steroid Characterisation from Soil and Slurry

A - Papers appearing in refereed journals
Manley, A., Collins, A. L., Joynes, A., Mellander, P. E. and Jordan, P. 2020. Comparing Extraction Methods for Biomarker Steroid Characterisation from Soil and Slurry. Water Air And Soil Pollution. 231 (10), pp. 1-15. https://doi.org/10.1007/s11270-020-04871-w

Invertebrate community structure predicts natural pest control resilience to insecticide exposure

A - Papers appearing in refereed journals
Greenop, A., Cook, S. M., Wilby, A., Pywell, R. F. and Woodcock, B. A. 2020. Invertebrate community structure predicts natural pest control resilience to insecticide exposure. Journal of Applied Ecology. https://doi.org/10.1111/1365-2664.13752

Money spider dietary choice in pre‐ and post‐harvest cereal crops using metabarcoding

A - Papers appearing in refereed journals
Cuff, J. P., Drake, L. E., Tercel, M. P. T. G., Stockdale, J. E., Orozco‐ter Wengel, P., Bell, J. R., Vaughan, I. P., Muller, C. T. and Symondson, W. O. C. 2020. Money spider dietary choice in pre‐ and post‐harvest cereal crops using metabarcoding. Ecological Entomology. https://doi.org/10.1111/een.12957

Field Validation of Senesced Banana Leaf Extracts for Trapping Banana Weevils on Smallholder Banana/Plantain Farms

A - Papers appearing in refereed journals
Birkett, M. A., Osafo-Acquaah, S., Powers, S. J. and Pickett, J. A. 2020. Field Validation of Senesced Banana Leaf Extracts for Trapping Banana Weevils on Smallholder Banana/Plantain Farms. Journal of Applied Entomology. https://doi.org/10.1111/jen.12838

What makes a weed a weed? How virus-mediated reverse genetics can help to explore the genetics of weediness

A - Papers appearing in refereed journals
Macgregor, D. 2020. What makes a weed a weed? How virus-mediated reverse genetics can help to explore the genetics of weediness. Outlooks on Pest Management. 31 (5), pp. 223 - 229. https://doi.org/DOI:10.1564/v31_oct_07

Using catchment characteristics to model seasonality of dissolved organic carbon fluxes in semi-arid mountainous headwaters

A - Papers appearing in refereed journals
Nosrati, K., Collins, A. L. and Fiener, P. 2020. Using catchment characteristics to model seasonality of dissolved organic carbon fluxes in semi-arid mountainous headwaters. Environmental Monitoring And Assessment. 192 (Article), p. 674. https://doi.org/10.1007/s10661-020-08626-2

CIEL Net zero carbon and uk livestock

D1 - Technical reports: non-confidential
Magowan, E., Buckingham, S., McAuliffe, G., Rees, R and Lee, M. R. F. 2020. CIEL Net zero carbon and uk livestock.

Occurrence and 15N-quantification of simultaneous nitrification and denitrification in N-fertilised soils incubated under oxygen-limiting conditions

A - Papers appearing in refereed journals
Castellano-Hinojosa, A., Charteris, A. F., Mueller, C., Jansen-Willems, A., Gonzalez-Lopez, J., Bedmar, E. J., Carrillo, P. and Cardenas, L. M. 2020. Occurrence and 15N-quantification of simultaneous nitrification and denitrification in N-fertilised soils incubated under oxygen-limiting conditions. Soil Biology and Biochemistry. 143, p. 107757. https://doi.org/10.1016/j.soilbio.2020.107757

Sheep urination frequency, volume, N excretion and chemical composition: Implications for subsequent agricultural N losses

A - Papers appearing in refereed journals
Marsden, K. A., Lush, L., Holmberg, J. A., Whelan, M. J., King, A. J., Wilson, R. P., Charteris, A. F., Cardenas, L. M., Jones, D.L. and Chadwick, D. R. 2020. Sheep urination frequency, volume, N excretion and chemical composition: Implications for subsequent agricultural N losses. Agriculture, Ecosystems & Environment. 302, p. 107073. https://doi.org/10.1016/j.agee.2020.107073

Novel Multiplex and Loop-Mediated Isothermal Amplification (LAMP) Assays for Rapid Species and Mating-Type Identification of Oculimacula acuformis and O. yallundae (Causal Agents of Cereal Eyespot), and Application for Detection of Ascospore Dispersal and in planta Use

A - Papers appearing in refereed journals
King, K. M., Eyres, G. J., West, J. S., Siraf, C., Matusinsky, P., Palicova, J., Canning, G., Bateman, G. L., Fraaije, B. A. and Dyer, P. S. 2020. Novel Multiplex and Loop-Mediated Isothermal Amplification (LAMP) Assays for Rapid Species and Mating-Type Identification of Oculimacula acuformis and O. yallundae (Causal Agents of Cereal Eyespot), and Application for Detection of Ascospore Dispersal and in planta Use. Phytopathology. https://doi.org/10.1094/PHYTO-04-20-0116-R

Ten amazing facts about aphids

G - Articles in popular magazines and other technical publications
Harrington, R. 2020. Ten amazing facts about aphids. Transactions of the Hertfordshire Natural History Society. 52 (1), pp. 69-72.

Long-term farmyard manure application affects soil organic phosphorus cycling: A combined metagenomic and 33P/14C labelling study

A - Papers appearing in refereed journals
Ma, Q., Wen, Y., Ma, J., Macdonald, A. J., Hill, P. W., Chadwick, D. R., Wu, L. and Jones. D. L. 2020. Long-term farmyard manure application affects soil organic phosphorus cycling: A combined metagenomic and 33P/14C labelling study. Soil Biology and Biochemistry. 149 (Article), p. 107959. https://doi.org/10.1016/j.soilbio.2020.107959

Soil carbon, nitrogen, and sulphur status affects the metabolism of organic S but not its uptake by microorganisms

A - Papers appearing in refereed journals
Ma, Q., Wen, Y., Pan, W., Macdonald, A. J., Hill, P. W., Chadwick, D. R., Wu, L. and Jones, D. L. 2020. Soil carbon, nitrogen, and sulphur status affects the metabolism of organic S but not its uptake by microorganisms . Soil Biology and Biochemistry. 149, p. 107943. https://doi.org/10.1016/j.soilbio.2020.107943

Mapping sites of gibberellin biosynthesis in the Arabidopsis root tip

A - Papers appearing in refereed journals
Barker, R., Garcia, M. N. F., Powers, S. J., Vaughan, S., Bennett, M. J., Phillips, A. L., Thomas, S. G. and Hedden, P. 2020. Mapping sites of gibberellin biosynthesis in the Arabidopsis root tip. New Phytologist. https://doi.org/10.1111/NPH.16967

Environmental impacts of nitrogen emissions in China and the role of policies in emission reduction

A - Papers appearing in refereed journals
Liu, X. J., Xu, W., Du, E. Z., Tang, A. H., Zhang, Y. Y., Wen, Z., Hao, T. X., Pan, Y. P., Zhang, L., Gu. B. J., Zhao, Y., Shen, J. L., Zhou, F., Gao, Z. L., Feng, Z. Z., Chang, Y. H., Goulding, K. W. T., Collett, J. L., Vitousek, P. M. and Zhang, F. S. 2020. Environmental impacts of nitrogen emissions in China and the role of policies in emission reduction. Philosophical Transactions of the Royal Society A-Mathematical Physical and Engineering Sciences. 378 (Article), p. 20190324. https://doi.org/10.1098/rsta.2019.0324

Suppression of a BAHD acyltransferase decreases p-coumaroyl on arabinoxylan and improves biomass digestibility in the model grass Setaria viridis

A - Papers appearing in refereed journals
Mota, T. R., De Souza, W. R., Oliveira, D. M., Martins, P. K., Sampaio, B. L., Vinecky, F., Ribeiro, A. P., Duarte, K. E., Pacheco, T. F., De K. V. Monteiro, N., Campanha, R. B., Marchiosi, R., Vieriea, D. S., Kobayashi, A. K., De O Molinari, P. A., Ferrarese-Filho, O., Mitchell, R. A. C., Molinari, H. B. and Dos Santos, W. D. 2020. Suppression of a BAHD acyltransferase decreases p-coumaroyl on arabinoxylan and improves biomass digestibility in the model grass Setaria viridis. Plant Journal. p. 15046. https://doi.org/10.1111/tpj.15046

The contribution of fiber components to water absorption of wheat grown in the UK

A - Papers appearing in refereed journals
Lovegrove, A., Wood, A., Hassall, K. L., Howes, L., Poole, M, Tosie, P. and Shewry, P. R. 2020. The contribution of fiber components to water absorption of wheat grown in the UK. Cereal chemistry. 97 (5), pp. 940-948. https://doi.org/10.1002/cche.10316

Adjusting for conditional bias in process model simulations of hydrological extremes: an experiment using the North Wyke Farm Platform

A - Papers appearing in refereed journals
Curceac, S., Atkinson, P. M., Milne, A. E., Wu, L. and Harris, P. 2020. Adjusting for conditional bias in process model simulations of hydrological extremes: an experiment using the North Wyke Farm Platform. Frontiers in Artificial Intelligence. 3 (82). https://doi.org/10.3389/frai.2020.565859

In-field prevalence of resistant grain aphid Sitobion avenae (Fabricius)

A - Papers appearing in refereed journals
Walsh, L. E., Schmidt, O., Williamson, M. S. and Gaffney, M. T. 2020. In-field prevalence of resistant grain aphid Sitobion avenae (Fabricius). Biology and Environment: Proceedings of the Royal Irish Academy. 120B (1), pp. 29-38. https://doi.org/10.3318/bioe.2020.05

The role of vegetative cell fusions in the development and asexual reproduction of the wheat fungal pathogen Zymoseptoria tritici

A - Papers appearing in refereed journals
Francisco, C.S., Zwyssig, M.M. and Palma-Guerrero, J. 2020. The role of vegetative cell fusions in the development and asexual reproduction of the wheat fungal pathogen Zymoseptoria tritici. BMC Biology. 18 (article 99). https://doi.org/10.1186/s12915-020-00838-9

Review: Allelochemicals as multi-kingdom plant defence compounds: Towards an integrated approach

A - Papers appearing in refereed journals
Hickman, D. T., Rasmussen, A., Ritz, K., Birkett, M. A. and Neve, P. 2020. Review: Allelochemicals as multi-kingdom plant defence compounds: Towards an integrated approach. Pest Management Science. https://doi.org/10.1002/ps.6076

Uptake competition between selenium and sulphur fertilizers in sequential harvests of ryegrass: A stable isotope study

Conference paper
Jaing, L., Young, S. D., Bailey, E. H., Broadley, M. R., Graham, N. S. and McGrath, S. P. 2020. Uptake competition between selenium and sulphur fertilizers in sequential harvests of ryegrass: A stable isotope study. https://doi.org/10.1201/9780429423482-27

Ensembl Genomes 2020-enabling non-vertebrate genomic research

A - Papers appearing in refereed journals
Cuzick, A., Howe, K. L., Contreras-Moreira, B., Silva, N. D., Maslen, G., Akanni, W., Allen, J., Alvarez-Jarreta, J., Barba, M., Bolser, D. M., Cambell, L., Carbajo, M., Chakiachvili, M., Christensen, M., Cummins, C., Cuzick, A., Davis, P., Fexova, S., Gall, A., George, N., Gil, L., Gupta, P., Hammond-Kosack, K. E., Haskell, E., Hunt, S. E., Jaiswal, P., Janacek, S. H., Kersey, P. J., Langridge, N., Maheswari, U., Maurel, T., McDowall, M. D., Moore, B., Muffato, M., Naamati, G., Naithani, S., Olson, A., Papatheodorou, I., Patricio, M., Paulini, M., Pedro, H., Perry, E., Preece, J., Rosello, M., Russell, M., Sitnik, V., Staines, D. M., Stein, J., Tello-Ruiz, M. K., Trevanion, S. J., Urban, M., Wei, S., Ware, D., Williams, G., Yates, A. D. and Flicek, P. 2020. Ensembl Genomes 2020-enabling non-vertebrate genomic research. Nucleic Acids Research. 48 (D1), pp. D689-D695. https://doi.org/10.1093/nar/gkz890

The Monarch Initiative in 2019: an integrative data and analytic platform connecting phenotypes to genotypes across species.

A - Papers appearing in refereed journals
Shefchek, K. A., Harris, N. L., Gargano, M., Matentzoglu, N., Unni, D., Brush, M., Keith, D., Conlin, T., Vasilevsky, N., Zhang, X. A., Balhoff, J. P., Babb, L., Bello, S. M., Blau, H., Bradford, Y., Carbon, S., Carmody, L., Chan, L. E., Cipriani, V., Cuzick, A., Rocca, M. D., Dunn, N., Essaid, S., Fey, P., Grove, C., Gourdine, J., Hamosh, A., Harris, M., Helbig, I., Hoatlin, M., Joachimiak, M., Jupp, S., Lett, K. B., Lewis, S. E., McNamara, C., Pendlington, Z. M., Pilgrim, C., Putman, T., Ravanmehr, V., Reese, J., Riggs, E., Robb, S., Roncaglia, P., Seager, J., Segerdell, E., Similuk, M., Storm, A. L., Thaxon, C., Thessen, A., Jacobsen, J. O. B., McMurry, J. A., Groza, T., Köhler, S., Smedley, D., Robinson, P. N., Mungall, C. J., Haendel, M. A., Munoz-Torres, M. C. and Osumi-Sutherland, D. 2020. The Monarch Initiative in 2019: an integrative data and analytic platform connecting phenotypes to genotypes across species. Nucleic Acids Research. 48 (D1), p. D704–D715. https://doi.org/10.1093/nar/gkz997

A carbohydrate-binding protein, B-GRANULE CONTENT 1, influences starch granule size distribution in a dose-dependent manner in polyploid wheat

A - Papers appearing in refereed journals
Chia, T., Chirico, M., King, R., Ramirez-Gonzalez, R., Saccomanno, B., Seung, D., Simmonds, J., Trick, M., Uauy, C., Verhoeven, T. and Trafford, K. 2020. A carbohydrate-binding protein, B-GRANULE CONTENT 1, influences starch granule size distribution in a dose-dependent manner in polyploid wheat. Journal of Experimental Botany. 71 (1), pp. 105-115. https://doi.org/10.1093/jxb/erz405

Silicon amendment induces synergistic plant defense mechanism against pink stem borer (Sesamia inferens Walker.) in finger millet (Eleusine coracana Gaertn.).

A - Papers appearing in refereed journals
Jadhao, K. R., Bansal, A. and Rout, G. R. 2020. Silicon amendment induces synergistic plant defense mechanism against pink stem borer (Sesamia inferens Walker.) in finger millet (Eleusine coracana Gaertn.). Scientific Reports. 10 (Article), p. 4229. https://doi.org/10.1038/s41598-020-61182-0

Using a Crop Model to Benchmark Miscanthus and Switchgrass

A - Papers appearing in refereed journals
Akkari, M. E., Ferchaud, F., Strullu, L., Shield, I. F., Perrin, A., Drouet, J. L., Jayet, P. A. and Gabrielle, B. 2020. Using a Crop Model to Benchmark Miscanthus and Switchgrass. Energies. 13 (15), pp. 3942-3954. https://doi.org/10.3390/en13153942

Ants indirectly reduce the reproductive performance of a leafless shrub by benefiting aphids through predator deterrence

A - Papers appearing in refereed journals
Ortega-Ramos, P., Mezquida, E. T. and Acebes, P. 2020. Ants indirectly reduce the reproductive performance of a leafless shrub by benefiting aphids through predator deterrence. Plant Ecology. 221, pp. 91-101. https://doi.org/10.1007/s11258-019-00995-0

Trehalose 6-phosphate signalling and impact on crop yield

A - Papers appearing in refereed journals
Paul, M. J., Watson, A. and Griffiths, C. A. 2020. Trehalose 6-phosphate signalling and impact on crop yield. Biochemical Society Transactions. 48 (5), pp. 2127-2137. https://doi.org/10.1042/BST20200286

Edaphic factors and plants influence denitrification in soils from a long-term arable experiment

A - Papers appearing in refereed journals
Clark, I. M., Fu, Q., Abadie, M., Dixon, E. R., Blaud, A. and Hirsch, P. R. 2020. Edaphic factors and plants influence denitrification in soils from a long-term arable experiment. Scientific Reports. 10 (Article), p. 16053. https://doi.org/10.1038/s41598-020-72679-z

Effect of Plant Growth Promoting Bacteria on the Growth of Wheat Seedlings Subjected to Phosphate Starvation

A - Papers appearing in refereed journals
Cataldi, M. P., Heuer, S., Mauchline, T. H., Wilkinson, M. D., Masters-Clark, E., Di Benedetto, N. A., Corbo, M. R. and Flagella, Z. 2020. Effect of Plant Growth Promoting Bacteria on the Growth of Wheat Seedlings Subjected to Phosphate Starvation . Agronomy. 10 (7), p. 978. https://doi.org/10.3390/agronomy10070978

Odorant binding proteins promote flight activity in the migratory insect, Helicoverpa armigera

A - Papers appearing in refereed journals
Wang, S., Minter, M., Homem, R. A., Michaelson, L. V., Venthur, H., Lim, K.S., Withers, A., Xi, J., Jones, C. M. and Zhou, J-J. 2020. Odorant binding proteins promote flight activity in the migratory insect, Helicoverpa armigera. Molecular Ecology. https://doi.org/10.1111/mec.15556

A strategy for modelling heavy-tailed greenhouse gases (GHG) data using the generalised extreme value distribution: Are we overestimating GHG flux using the sample mean?

A - Papers appearing in refereed journals
Dhanoa, D., Louro-Lopez, A., Cardenas, L. M., Shepherd, A., Sanderson, R. and Lopez, S. 2020. A strategy for modelling heavy-tailed greenhouse gases (GHG) data using the generalised extreme value distribution: Are we overestimating GHG flux using the sample mean? Atmospheric Environment. 237, p. 117500. https://doi.org/10.1016/j.atmosenv.2020.117500

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