Rothamsted Research

TitleRothamsted Research
TypeInstitute

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Potential use of rare earth oxides as tracers of organic matter in grassland

A - Papers appearing in refereed journals
Senbayram, M., Bol, R., Dixon, E. R., Fisher, A., Stevens, C., Quinton, J. and Fangueiro, D. 2015. Potential use of rare earth oxides as tracers of organic matter in grassland. Journal of Plant Nutrition and Soil Science. 178 (2), pp. 288-296. https://doi.org/10.1002/jpln.201400465

Dynamics of competition and co-infection between Zoophthora radicans and Pandora blunckii in Plutella xylostella larvae

A - Papers appearing in refereed journals
Sandoval-Aguilar, J. A., Guzman-Franco, A. W., Pell, J. K., Clark, S. J., Alatorre-Rosas, R., Santillan-Galicia, M. T. and Valdovinos-Ponce, G. 2015. Dynamics of competition and co-infection between Zoophthora radicans and Pandora blunckii in Plutella xylostella larvae. Fungal Ecology. 17, pp. 1-9. https://doi.org/10.1016/j.funeco.2015.04.003

Phosphorus use efficiency and management in agriculture

A - Papers appearing in refereed journals
Roberts, T. L. and Johnston, A. E. 2015. Phosphorus use efficiency and management in agriculture. Resources, Conservation and Recycling. 105, pp. 275-281. https://doi.org/10.1016/j.resconrec.2015.09.013

Optimizing biomass production systems - exploiting diverse growth traits in different environments

C1 - Edited contributions to conferences/learned societies
Richter, G. M., Cerasuolo, M., Cunniff, J., Agostini, F. and Richard, B. 2015. Optimizing biomass production systems - exploiting diverse growth traits in different environments. Biomass and Energy Crops V. Aspects of Applied Biology 131 . Association of Applied Biologists (AAB) Wellesbourne Warwick . pp. 97-103

Soil water uptake from SRC willow simulated using the process-based model LUCASS

C1 - Edited contributions to conferences/learned societies
Richard, B., Cunniff, J., Cerasuolo, M., Barraclough, T. J. P., Gregory, A. S. and Richter, G. M. 2015. Soil water uptake from SRC willow simulated using the process-based model LUCASS. Biomass and Energy Crops V. Aspects of Applied Biology 131 . Association of Applied Biologists (AAB) Wellesbourne Warwick . pp. 251-255

The gibberellin precursor GA12 acts as a long-distance growth signal in Arabidopsis

A - Papers appearing in refereed journals
Regnault, T., Daviere, J-M., Wild, M., Sakvarelidze-Achard, L., Heintz, D., Carrera Bergua, E., Lopez Diaz, I., Gong, F., Hedden, P. and Achard, P. 2015. The gibberellin precursor GA12 acts as a long-distance growth signal in Arabidopsis. Nature Plants. 1, p. 15073. https://doi.org/10.1038/nplants.2015.73

Temperature and precipitation effects on wheat yield across a European transect: a crop model ensemble analysis using impact response surfaces

A - Papers appearing in refereed journals
Pirttioja, N., Semenov, M. A. and Stratonovitch, P. 2015. Temperature and precipitation effects on wheat yield across a European transect: a crop model ensemble analysis using impact response surfaces. Climate Research. 65, pp. 87-105. https://doi.org/10.3354/cr01322

Larger phylogenetic distances in litter mixtures: lower microbial biomass and higher C/N ratios but equal mass loss

A - Papers appearing in refereed journals
Pan, X., Berg, M. P., Butenschoen, O., Murray, P. J., Bartish, I. V., Cornelissen, J. H. C., Dong, M. and Prinzing, A. 2015. Larger phylogenetic distances in litter mixtures: lower microbial biomass and higher C/N ratios but equal mass loss. Proceedings of the Royal Society of London Series B Biological Sciences. 282, p. 20150103. https://doi.org/10.1098/rspb.2015.0103

Basic steps in geostatistics: the variogram and kriging

E - Books edited/written by staff member, alone/with others
Oliver, M. A. and Webster, R. 2015. Basic steps in geostatistics: the variogram and kriging. London, Springer-Verlag.

Management opportunities to mitigate greenhouse gas emissions from Chinese agriculture

A - Papers appearing in refereed journals
Nayak, D., Saetnan, E., Cheng, K., Wang, W., Koslowski, F., Cheng, Y-F., Zhu, W. Y., Wang, J-K., Liu, J-X., Moran, D., Yan, X., Cardenas, L. M., Newbold, J., Pan, G., Lu, Y. and Smith, P. 2015. Management opportunities to mitigate greenhouse gas emissions from Chinese agriculture. Agriculture, Ecosystems & Environment. 209 (1 November), pp. 108-124. https://doi.org/10.1016/j.agee.2015.04.035

Towards bioavailability-based soil criteria: past, present and future perspectives

A - Papers appearing in refereed journals
Naidu, R., Channey, R., Mcconnell, S., Johnston, N., Semple, K. T., McGrath, S. P., Dries, V., Nathanail, P., Harmsen, J., Pruszinski, A., Macmillan, J. and Palanisami, T. 2015. Towards bioavailability-based soil criteria: past, present and future perspectives. Environmental Science and Pollution Research. 22, pp. 8779-8785. https://doi.org/10.1007/s11356-013-1617-x

The effect of farmers' decisions on pest control with Bt crops: a billion dollar game of strategy

A - Papers appearing in refereed journals
Milne, A. E., Bell, J. R., Hutchison, W. D., Van Den Bosch, F., Mitchell, P. D., Crowder, D., Parnell, S. and Whitmore, A. P. 2015. The effect of farmers' decisions on pest control with Bt crops: a billion dollar game of strategy. PLOS Computational Biology. 11, p. e1004483. https://doi.org/10.1371/journal.pcbi.1004483

In silico system analysis of physiological traits determining grain yield and protein concentration for wheat as influenced by climate and crop management

A - Papers appearing in refereed journals
Martre, P., He, J., Le Gouis, J. and Semenov, M. A. 2015. In silico system analysis of physiological traits determining grain yield and protein concentration for wheat as influenced by climate and crop management. Journal of Experimental Botany. 66, pp. 3581-3598. https://doi.org/10.1093/jxb/erv049

Statistical analysis of large simulated yield datasets for studying climate effects

B - Book chapters etc edited externally
Makowski, D., Asseng, S., Ewert, F., Bassu, S., Durand, J., Martre, P., Adam, M., Aggarwal, P. K., Angulo, C., Baron, C., Basso, B., Bertuzzi, P., Biernath, C., Boogard, H., Boote, K. J., Brisson, N., Cammarano, D., Challinor, A. J., Conijn, S., Corbeels, M., Deryng, D., De Sanctis, G., Doltra, J., Gayler, S., Goldberg, R., Grassini, P., Hatfield, J. L., Heng, L., Hoek, S., Hooker, J., Hunt, T., Ingwersen, J., Izaurralde, R. C., Jongschaap, R., Jones, J., Kersebaum, K. C., Kim, S., Lizaso, J., Müller, C., Kumar, N., Nendel, C., O'Leary, G., Olsen, J., Osborne, T., Palosuo, T., Pravia, M., Priesack, E., Semenov, M. A. and Stratonovitch, P. 2015. Statistical analysis of large simulated yield datasets for studying climate effects. in: Hillel, D. and Rosenzweig, C. (ed.) Handbook of climate change and agroecosystems: the Agricultural Model Intercomparison and Improvement Project (AgMIP) Imperial College Press, London. pp. 279-295

Nitrous oxide emissions from forage maize production on a Humic Cambisol fertilized with mineral fertilizer or slurries in Galicia, Spain

A - Papers appearing in refereed journals
Louro, A., Baez, D., Garcia, M. I. and Cardenas, L. M. 2015. Nitrous oxide emissions from forage maize production on a Humic Cambisol fertilized with mineral fertilizer or slurries in Galicia, Spain. Geoderma Regional. 5, pp. 54-63. https://doi.org/10.1016/j.geodrs.2015.03.004

Transcriptional dynamics driving MAMP-triggered immunity and pathogen effector-mediated immunosuppression in Arabidopsis leaves following infection with Pseudomonas synringae pv tomato DC3000

A - Papers appearing in refereed journals
Lewis, L. A., Polanski, K., De Torres-Zabala, M., Jayaraman, S., Bowden, L., Moore, J., Penford, C. A., Jenkins, D. J., Hill, C., Baxter, L., Kulasekaran, S., Truman, W., Littlejohn, G., Prusinska, J., Mead, A., Steinbrenner, J., Hickman, R., Rand, D., Wild, D. L., Ott, S., Buchanan-Wollaston, V., Smirnoff, N., Beynon, J., Denby, K. and Grant, M. 2015. Transcriptional dynamics driving MAMP-triggered immunity and pathogen effector-mediated immunosuppression in Arabidopsis leaves following infection with Pseudomonas synringae pv tomato DC3000. The Plant Cell. 27, pp. 3038-3064. https://doi.org/10.1105/tpc.15.00471

Anaerobic digestates lower N2O emissions compared to cattle slurry by affecting rate and product stoichiometry of denitrification - an N2O isotopomer case study

A - Papers appearing in refereed journals
Koster, J. R., Cardenas, L. M., Bol, R., Lewicka-Szczebak, D., Senbayram, M., Well, R., Giesemann, A. and Dittert, K. 2015. Anaerobic digestates lower N2O emissions compared to cattle slurry by affecting rate and product stoichiometry of denitrification - an N2O isotopomer case study. Soil Biology and Biochemistry. 84, pp. 65-74. https://doi.org/10.1016/j.soilbio.2015.01.021

Leptosphaeria maculans - an aggressive OSR pathogen and air pollutant

C2 - Non-edited contributions to conferences
Jedryczka, M., Kaczmarek, J., Dawidziuk, A., Aubertot, J. N., Latunde-Dada, A. O., West, J. S., Sadys, M., Kennedy, R., Gilski, M., Grinn-Gofron, A. and Strzelczak, A. 2015. Leptosphaeria maculans - an aggressive OSR pathogen and air pollutant. Abstracts 14th International Rapeseed Congress, Saskatoon, 5-9 July 2015 . pp. 98

Genetically engineering Bacillus subtilis with a heat-resistant arsenite methyltransferase for bioremediation of arsenic-contaminated organic waste

A - Papers appearing in refereed journals
Huang, K., Chen, C., Shen, Q., Rosen, B. P. and Zhao, F-J. 2015. Genetically engineering Bacillus subtilis with a heat-resistant arsenite methyltransferase for bioremediation of arsenic-contaminated organic waste. Applied and Environmental Microbiology. 81, pp. 6718-6724. https://doi.org/10.1128/AEM.01535-15

Identification and comparative expression analysis of odorant binding protein genes in the tobacco cutworm Spodoptera litura

A - Papers appearing in refereed journals
Gu, S-H., Zhou, J-J., Gao, S., Wang, D-H., Li, X-C., Guo, Y-Y. and Zhang, Y-J. 2015. Identification and comparative expression analysis of odorant binding protein genes in the tobacco cutworm Spodoptera litura. Scientific Reports. 5, p. 13800. https://doi.org/10.1038/srep13800

Unseen dangers of inappropriate legislation in agriculture

A - Papers appearing in refereed journals
Field, L. M. 2015. Unseen dangers of inappropriate legislation in agriculture. Food and Energy Security. 4 (1), pp. 1-2. https://doi.org/10.1002/fes3.55

SIP metagenomics identifies uncultivated Methylophilaceae as dimethylsulphide degrading bacteria in soil and lake sediment

A - Papers appearing in refereed journals
Eyice, O., Namura, M., Chen, Y., Mead, A., Samavedam, S. and Schafer, H. 2015. SIP metagenomics identifies uncultivated Methylophilaceae as dimethylsulphide degrading bacteria in soil and lake sediment. The ISME Journal. 9, pp. 2336-2348. https://doi.org/10.1038/ismej.2015.37

Crop modelling for integrated assessment of risk to food production from climate change

A - Papers appearing in refereed journals
Ewert, F., Rotter, R. P., Bindi, M., Webber, H., Trnka, M., Kersebaum, K. C., Olesen, J. E., Van Ittersum, M. K., Janssen, S., Rivington, M., Semenov, M. A., Wallach, D., Porter, J. R., Stewart, D., Verhagen, J., Gaiser, T., Palosuo, T., Tao, F., Nendel, C., Roggero, P. P., Bartosova, L. and Asseng, S. 2015. Crop modelling for integrated assessment of risk to food production from climate change. Environmental Modelling and Software. 72, pp. 287-303. https://doi.org/10.1016/j.envsoft.2014.12.003

The importance of soil drying and re-wetting in crop phytohormonal and nutritional responses to deficit irrigation

A - Papers appearing in refereed journals
Dodd, I. C., Puertolas, J., Huber, K., Perez-Perez, J. G., Wright, H. R. and Blackwell, M. S. A. 2015. The importance of soil drying and re-wetting in crop phytohormonal and nutritional responses to deficit irrigation. Journal of Experimental Botany. 66, pp. 2239-2252. https://doi.org/10.1093/jxb/eru532

Aspergillus nidulans protein kinase A plays an important role in cellulase production

A - Papers appearing in refereed journals
De Assis, L. J., Ries, L. N. A., Savoldi, M., Dos Reis, T. F., Brown, N. A. and Goldman, G. H. 2015. Aspergillus nidulans protein kinase A plays an important role in cellulase production. Biotechnology for Biofuels. 8, p. 213. https://doi.org/10.1186/s13068-015-0401-1

Hazelnut allergy across Europe dissected molecularly: a EuroPrevall outpatient clinic survey

A - Papers appearing in refereed journals
Datema, M. R., Zuidmeer-Jongejan, L., Asero, R., Barreales, L., Belohlavkova, S., De Bley, F., Bures, P., Clausen, M., Dubakiene, R., Gislason, D., Jedrzejczak-Czechowicz, M., Kowalski, M. L., Knulst, A. C., Kralimarkova, T., Le, T-M. and Lovegrove, A. 2015. Hazelnut allergy across Europe dissected molecularly: a EuroPrevall outpatient clinic survey. Journal Of Allergy And Clinical Immunology. 136, pp. 382-391. https://doi.org/10.1016/j.jaci.2014.12.1949

Biorefinery strategies for upgrading Distillers' Dried Grains with Solubles (DDGS)

A - Papers appearing in refereed journals
Chatzifragkou, A., Kosik, O., Prabhakumari, P. C., Lovegrove, A., Frazier, R. A., Shewry, P. R. and Charalampopoulos, D. 2015. Biorefinery strategies for upgrading Distillers' Dried Grains with Solubles (DDGS). Process Biochemistry. 50 (12), pp. 2194-2207. https://doi.org/10.1016/j.procbio.2015.09.005

Detection of flow direction in high-flying insect and songbird migrants

A - Papers appearing in refereed journals
Chapman, J. W., Nilsson, C., Lim, K. S., Backman, J., Reynolds, D. R., Alerstam, T. and Reynolds, A. M. 2015. Detection of flow direction in high-flying insect and songbird migrants. Current Biology. 25, pp. R751-R752. https://doi.org/10.1016/j.cub.2015.07.074

Combining micro-bottom-up and macro-top-down modelling responses to nutrient cycles in complex agricultural systems

A - Papers appearing in refereed journals
Burdock, R. P. and Crawford, J. W. 2015. Combining micro-bottom-up and macro-top-down modelling responses to nutrient cycles in complex agricultural systems. Nutrient Cycling in Agroecosystems. 103, pp. 257-278. https://doi.org/10.1007/s10705-015-9739-9

Using 31P-NMR to investigate dynamics of soil phosphorus compounds in the Rothamsted Long Term Experiments

C2 - Non-edited contributions to conferences
Blackwell, M. S. A., Turner, B., Granger, S. J., Hooper, A. M., Darch, T., Hawkins, J. M. B., Yuan, H. and McGrath, S. P. 2015. Using 31P-NMR to investigate dynamics of soil phosphorus compounds in the Rothamsted Long Term Experiments. EGU.

Benchmark data set for wheat growth models: field experiments and AgMIP multi-model simulations

A - Papers appearing in refereed journals
Asseng, S., Ewert, F., Martre, P., Rosenzweig, C., Jones, J. W., Hatfield, J. L., Ruane, A. C., Boote, K. J., Thorburn, P. J., Rötter, R. P., Cammarano, D., Brisson, N., Basso, B., Aggarwal, P. K., Angulo, C., Bertuzzi, P., Biernath, C., Challinor, A. J., Doltra, J., Semenov, M. A. and Stratonovitch, P. 2015. Benchmark data set for wheat growth models: field experiments and AgMIP multi-model simulations. Open Data Journal for Agricultural Research. 1, pp. 1-5. https://doi.org/10.18174/odjar.v1i1

Validated predictive modelling of the environmental resistome

A - Papers appearing in refereed journals
Amos, G. C. A., Gozzard, E., Carter, C. E., Mead, A., Bowes, M. J., Hawkey, P. M., Zhang, L., Singer, A. C., Gaze, W. H. and Wellington, E. M. H. 2015. Validated predictive modelling of the environmental resistome. The ISME Journal. 9, pp. 1467-1476. https://doi.org/10.1038/ismej.2014.237

Insecticide synergists: good or bad for honey bees?

A - Papers appearing in refereed journals
Alptekin, S., Philippou, D., Field, L. M., Wegorek, P., Zamojska, J. and Moores, G. D. 2015. Insecticide synergists: good or bad for honey bees? Outlooks on Pest Management. 26, pp. 75-77. https://doi.org/10.1564/v26_apr_07

Warming reduces the cover and diversity of biocrust-forming mosses and lichens, and increases the physiological stress of soil microbial communities in a semi-arid Pinus halepensis plantation

A - Papers appearing in refereed journals
Maestre, F. T., Escolar, C., Bardgett, R. D., Dungait, J. A. J., Gozalo, B. and Ochoa, V. 2015. Warming reduces the cover and diversity of biocrust-forming mosses and lichens, and increases the physiological stress of soil microbial communities in a semi-arid Pinus halepensis plantation. Frontiers in Microbiology. 6, p. 865. https://doi.org/10.3389/fmicb.2015.00865

Sphingolipid metabolism is strikingly different between pollen and leaf in Arabidopsis as revealed by compositional and gene expression profiling

A - Papers appearing in refereed journals
Luttgeharm, K. D., Kimberlin, A. N., Cahoon, R. E., Cerny, R. L., Napier, J. A., Markham, J. E. and Cahoon, E. B. 2015. Sphingolipid metabolism is strikingly different between pollen and leaf in Arabidopsis as revealed by compositional and gene expression profiling. Phytochemistry. 115, pp. 121-129. https://doi.org/10.1016/j.phytochem.2015.02.019

Disaggregated N2O emission factors in China based on cropping parameters create a robust approach to the IPCC Tier 2 methodology

A - Papers appearing in refereed journals
Shepherd, A., Yan, X., Nayak, D., Newbold, J., Moran, D., Dhanoa, M. S., Goulding, K. W. T., Smith, P. and Cardenas, L. M. 2015. Disaggregated N2O emission factors in China based on cropping parameters create a robust approach to the IPCC Tier 2 methodology. Atmospheric Environment. 122, pp. 272-281. https://doi.org/10.1016/j.atmosenv.2015.09.054

A conserved cytochrome P450 evolved in seed plants regulates flower maturation

A - Papers appearing in refereed journals
Liu, Z., Boachon, B., Lugan, R., Tavares, R., Erhardt, M., Mutterer, J., Demais, V., Pateyron, S., Brunaud, V., Ohnishi, T., Pencik, A., Achard, P., Gong, F., Hedden, P., Werck-Reichhart, D. and Renault, H. 2015. A conserved cytochrome P450 evolved in seed plants regulates flower maturation. Molecular Plant. 8, pp. 1751-1765. https://doi.org/10.1016/j.molp.2015.09.002

Effect of soil strength on roots and vegetative growth of wheat at seedling stage

A - Papers appearing in refereed journals
Khattak, G. S. S., Webster, C. P., Saeed, I. and Khan, A. J. 2015. Effect of soil strength on roots and vegetative growth of wheat at seedling stage. Pakistan Journal Of Botany. 47 (2), pp. 523-526.

Nanomaterials in biosolids inhibit nodulation, shift microbial community composition, and result in increased metal uptake relative to bulk/dissolved metals

A - Papers appearing in refereed journals
Judy, J. D., Mcnear, D. H. Jr., Chen, C., Lewis, R. W., Tsyusko, O. V., Bertsch, P. M., Rao, W., Stegemeier, J., Lowry, G. V., McGrath, S. P., Durenkamp, M. and Unrine, J. M. 2015. Nanomaterials in biosolids inhibit nodulation, shift microbial community composition, and result in increased metal uptake relative to bulk/dissolved metals. Environmental Science & Technology. 49 (14), pp. 8751-8758. https://doi.org/10.1021/acs.est.5b01208

Towards the industrial production of omega-3 long chain polyunsaturated fatty acids from a genetically modified diatom Phaeodactylum tricornutum

A - Papers appearing in refereed journals
Hamilton, M. L., Warwick, J., Terry, A., Allen, M. J., Napier, J. A. and Sayanova, O. V. 2015. Towards the industrial production of omega-3 long chain polyunsaturated fatty acids from a genetically modified diatom Phaeodactylum tricornutum. PLOS ONE. 10, p. e0144054. https://doi.org/10.1371/journal.pone.0144054

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