Rothamsted Research

TitleRothamsted Research
TypeInstitute

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Data analysis for 16S microbial profiling from different benchtop sequencing platforms

A - Papers appearing in refereed journals
Pylro, V. S., Roesch, L. F. W., Morais, D. K., Clark, I. M., Hirsch, P. R. and Totola, M. R. 2014. Data analysis for 16S microbial profiling from different benchtop sequencing platforms. Journal of Microbiological Methods. 107 (December), pp. 30-37. https://doi.org/10.1016/j.mimet.2014.08.018

Use of loop-mediated isothermal amplification assays to detect azole-insensitive CYP51- overexpressing strains of Zymoseptoria tritici

C2 - Non-edited contributions to conferences
Fraaije, B. A. 2014. Use of loop-mediated isothermal amplification assays to detect azole-insensitive CYP51- overexpressing strains of Zymoseptoria tritici. American Phytopathological Society (APS).

Evolution and spread of azole-insensitive Zymoseptoria tritici field isolates in the UK

C2 - Non-edited contributions to conferences
Fraaije, B. A., Atkins, S., Luo, J., Diez De La Fuente, P. and Hawkins, N. J. 2014. Evolution and spread of azole-insensitive Zymoseptoria tritici field isolates in the UK. American Phytopathological Society (APS).

Delivering sustainable crop protection systems via the seed: exploiting natural constitutive and inducible defence pathways

A - Papers appearing in refereed journals
Pickett, J. A., Aradottir, G. I., Birkett, M. A., Bruce, T. J. A., Hooper, A. M., Midega, C. A. O., Jones, H. D., Matthes, M. C., Napier, J. A., Pittchar, J. O., Smart, L. E., Woodcock, C. M. and Khan, Z. R. 2014. Delivering sustainable crop protection systems via the seed: exploiting natural constitutive and inducible defence pathways. Philosophical Transactions of the Royal Society B-Biological Sciences. 369 (1639), p. 20120281. https://doi.org/10.1098/rstb.2012.0281

Genetic engineering of secondary metabolism for plant protection

C2 - Non-edited contributions to conferences
Pickett, J. A. 2014. Genetic engineering of secondary metabolism for plant protection. Elsevier. https://doi.org/10.1016/j.nbt.2014.05.1737

Chemical ecology in the post genomics era

A - Papers appearing in refereed journals
Pickett, J. A. 2014. Chemical ecology in the post genomics era. Journal of Chemical Ecology. 40 (4), pp. 319-319. https://doi.org/10.1007/s10886-014-0418-0

Does organic management lead to enhanced soil physical quality?

A - Papers appearing in refereed journals
Papadopoulos, A., Bird, N. R. A., Whitmore, A. P. and Mooney, S. J. 2014. Does organic management lead to enhanced soil physical quality? Geoderma. 213, pp. 435-443. https://doi.org/10.1016/j.geoderma.2013.08.033

Permanent draft genomes of four new coccolithoviruses: EhV-18, EhV-145, EhV-156 and EhV-164

A - Papers appearing in refereed journals
Nissimov, J. I., Napier, J. A., Kimmance, S. A. and Allen, M. J. 2014. Permanent draft genomes of four new coccolithoviruses: EhV-18, EhV-145, EhV-156 and EhV-164. Marine Genomics. 15, pp. 7-8. https://doi.org/10.1016/j.margen.2014.02.004

Changes in the incidence of herbicide-resistant Alopecurus myosuroides (black-grass) in England, based on sampling the same randomly selected fields on two occasions

A - Papers appearing in refereed journals
Moss, S. R., Hull, R. I., Marshall, R. and Perryman, S. A. M. 2014. Changes in the incidence of herbicide-resistant Alopecurus myosuroides (black-grass) in England, based on sampling the same randomly selected fields on two occasions. Aspects of Applied Biology. 127, pp. 39-48.

An assessment of nitrification inhibitors to reduce nitrous oxide emissions from UK agriculture

A - Papers appearing in refereed journals
Misselbrook, T. H., Cardenas, L. M., Camp, V., Thorman, R. E., Williams, J. R., Rollet, A. J. and Chambers, B. J. 2014. An assessment of nitrification inhibitors to reduce nitrous oxide emissions from UK agriculture. Environmental Research Letters. 9, p. 115006. https://doi.org/10.1088/1748-9326/9/11/115006

Spatiotemporal changes in arbuscular mycorrhizal fungal communities under different nitrogen inputs over a 5-year period in intensive agricultural ecosystems on the North China Plain

A - Papers appearing in refereed journals
Liu, W., Jiang, S., Zhang, Y., Yue, S., Christie, P., Murray, P. J., Li, X. and Zhang, J. 2014. Spatiotemporal changes in arbuscular mycorrhizal fungal communities under different nitrogen inputs over a 5-year period in intensive agricultural ecosystems on the North China Plain. FEMS Microbiology Ecology. 90 (2), pp. 436-453. https://doi.org/10.1111/1574-6941.12405

Current status of herbicide-resistant weeds in the UK

C1 - Edited contributions to conferences/learned societies
Hull, R. I., Tatnell, L. V., Cook, S. K., Beffa, R. and Moss, S. R. 2014. Current status of herbicide-resistant weeds in the UK. Crop production in Southern Britain: precision decisions for profitable cropping. Aspects of Applied Biology 127 . Association of Applied Biologists (AAB) Wellesbourne Warwick . pp. 261-272

The role of multiple CYP51 paralogues in intrinsic and acquired azole sensitivity differences

B - Book chapters etc edited externally
Hawkins, N. J., Cools, H. J. and Fan, J. 2014. The role of multiple CYP51 paralogues in intrinsic and acquired azole sensitivity differences. in: Fraaije, B. A., Deising, H. B. and Dehne, H. W. (ed.) Modern fungicides and antifungal compounds. Vol. 7 Deutsche Phytomedizinische Gesellschaft, Braunschweig. pp. 97-102

The Rothamsted Insect Survey strikes gold

G - Articles in popular magazines and other technical publications
Harrington, R. 2014. The Rothamsted Insect Survey strikes gold. Antenna. 38 (3), pp. 158-166.

Investigating the photoprotective role of cytochrome b-559 in photosystem II in a mutant with altered ligation of the haem

A - Papers appearing in refereed journals
Hamilton, M. L., Franco, E., Deak, Z., Schlodder, E., Vass, I. and Nixon, P. J. 2014. Investigating the photoprotective role of cytochrome b-559 in photosystem II in a mutant with altered ligation of the haem. Plant and cell physiology. 55, pp. 1276-1285. https://doi.org/10.1093/pcp/pcu070

Differential immunoreactivity of the root-knot nematodes, Meliodogyne graminicola and Meloidogyne incognita to polyclonal and monoclonal antibodies and identification of antigens through proteomics approach

A - Papers appearing in refereed journals
Dutta, T. K., Lovegrove, A., Gaur, H. S. and Curtis, R. H. C. 2014. Differential immunoreactivity of the root-knot nematodes, Meliodogyne graminicola and Meloidogyne incognita to polyclonal and monoclonal antibodies and identification of antigens through proteomics approach. African Journal of Microbiology Research. 8, pp. 1245-1254. https://doi.org/10.5897/AJMR2013.6450

Molecular characterization of DDT resistance in Anopheles gambiae from Benin

A - Papers appearing in refereed journals
Djegbe, I., Agossa, F. R., Jones, C. M., Poupardin, R., Cornelie, S., Akogbeto, M., Ranson, H. and Corbel, V. 2014. Molecular characterization of DDT resistance in Anopheles gambiae from Benin. Parasites & Vectors. 7, p. 409. https://doi.org/10.1186/1756-3305-7-409

Woody plant encroachment into grasslands leads to accelerated erosion of previously stable organic carbon from dryland soils

A - Papers appearing in refereed journals
Puttock, A., Dungait, J. A. J., Macleod, C. J. A., Bol, R. and Brazier, R. E. 2014. Woody plant encroachment into grasslands leads to accelerated erosion of previously stable organic carbon from dryland soils. Journal of Geophysical Research-Biogeosciences. 119 (12), pp. 2345-2357. https://doi.org/10.1002/2014JG002635

Surveillance for invading plant pathogens: the use of epidemic models to quantify performance and optimise survey design

C2 - Non-edited contributions to conferences
Parnell, S. and Van Den Bosch, F. 2014. Surveillance for invading plant pathogens: the use of epidemic models to quantify performance and optimise survey design. Abstracts EFSA/EPPO Joint Workshop on Data Collection and Information Sharing in Plant Health, Parma, 1-3 April 2014 . pp. 5

Understanding and manipulating plant lipid composition: metabolic engineering leads the way

A - Papers appearing in refereed journals
Napier, J. A., Haslam, R. P., Beaudoin, F. and Cahoon, E. B. 2014. Understanding and manipulating plant lipid composition: metabolic engineering leads the way. Current Opinion in Plant Biology. 19, pp. 68-75. https://doi.org/10.1016/j.pbi.2014.04.001

Use of the hormone-biosynthesis inhibitors fluridone and paclobutrazol to determine the effects of altered abscisic acid and gibberellin levels on pre-maturity alpha-amylase formation in wheat grains

A - Papers appearing in refereed journals
Kondhare, K. R., Hedden, P., Kettlewell, P. S., Farrell, A. D. and Monaghan, J. M. 2014. Use of the hormone-biosynthesis inhibitors fluridone and paclobutrazol to determine the effects of altered abscisic acid and gibberellin levels on pre-maturity alpha-amylase formation in wheat grains. Journal of Cereal Science. 60, pp. 210-216. https://doi.org/10.1016/j.jcs.2014.03.001

Gene expression in plant lipid metabolism in Arabidopsis seedlings

A - Papers appearing in refereed journals
Hsiao, A-S., Haslam, R. P., Michaelson, L. V., Liao, P., Napier, J. A. and Chye, M-L. 2014. Gene expression in plant lipid metabolism in Arabidopsis seedlings. PLOS ONE. 9, p. e107372. https://doi.org/10.1371/journal.pone.0107372

Arabidopsis cytosolic acyl-CoA-binding proteins ACBP4, ACBP5 and ACBP6 have overlapping but distinct roles in seed development

A - Papers appearing in refereed journals
Hsiao, A-S., Haslam, R. P., Michaelson, L. V., Liao, P., Chen, Q-F., Sooriyaarachchi, S., Mowbray, S. L., Napier, J. A., Tanner, J. A. and Chye, M-L. 2014. Arabidopsis cytosolic acyl-CoA-binding proteins ACBP4, ACBP5 and ACBP6 have overlapping but distinct roles in seed development. Bioscience Reports. 34 (6), pp. 865-877. https://doi.org/10.1042/BSR20140139

Modifying fatty acid profiles through a new cytokinin-based plastid transformation system

A - Papers appearing in refereed journals
Dunne, A., Maple-Grodem, J., Gargano, D., Haslam, R. P., Napier, J. A., Chua, N-H., Russell, R. and Geir Moller, S. 2014. Modifying fatty acid profiles through a new cytokinin-based plastid transformation system. The Plant Journal. 80 (6), pp. 1131-1138. https://doi.org/10.1111/tpj.12684

A description of the symptoms of Acute Oak Decline in Britain and a comparative review on causes of similar disorders on oak in Europe

A - Papers appearing in refereed journals
Denman, S., Brown, N., Kirk, S., Jeger, M. and Webber, J. 2014. A description of the symptoms of Acute Oak Decline in Britain and a comparative review on causes of similar disorders on oak in Europe. Forestry. 87 (4), pp. 535-551. https://doi.org/10.1093/forestry/cpu010

Rice ORMDL controls sphingolipid homeostasis affecting fertility resulting from abnormal pollen development

A - Papers appearing in refereed journals
Chueasiri, C., Chunthong, K., Pitnjam, K., Chakhonkaen, S., Sangarwut, N., Sangsawang, K., Suksangpanomrung, M., Michaelson, L. V., Napier, J. A. and Muangprom, A. 2014. Rice ORMDL controls sphingolipid homeostasis affecting fertility resulting from abnormal pollen development. PLOS ONE. 9, p. e106386. https://doi.org/10.1371/journal.pone.0106386

Oleaginous crops as integrated production platforms for food, feed, fuel and renewable industrial feedstock

A - Papers appearing in refereed journals
Beaudoin, F., Sayanova, O. V., Haslam, R. P., Bancroft, I. and Napier, J. A. 2014. Oleaginous crops as integrated production platforms for food, feed, fuel and renewable industrial feedstock. OCL - Oilseeds and fats, Crops and Lipids. 21 (6), p. D606. https://doi.org/10.1051/ocl/2014042

Distributed and dynamic modelling of hydrology, phosphorus and ecology in the Hampshire Avon and Blashford Lakes: evaluating alternative strategies to meet WFD standards

A - Papers appearing in refereed journals
Whitehead, P. G., Jin, L., Crossman, J., Comber, S., Johnes, P. J., Daldorph, P., Flynn, N., Collins, A. L., Butterfield, D., Mistry, R., Bardon, R., Pope, L. and Willows, R. 2014. Distributed and dynamic modelling of hydrology, phosphorus and ecology in the Hampshire Avon and Blashford Lakes: evaluating alternative strategies to meet WFD standards. Science of the Total Environment. 481, pp. 157-166. https://doi.org/10.1016/j.scitotenv.2014.02.007

Monitoring air and rain for plant pathogens

C2 - Non-edited contributions to conferences
West, J. S. 2014. Monitoring air and rain for plant pathogens. Abstracts EFSA/EPPO Joint Workshop on Data Collection and Information Sharing in Plant Health, Parma, 1-3 April 2014 . pp. 12

Precision disease detection to enhance crop protection decisions in a changing climate

C1 - Edited contributions to conferences/learned societies
West, J. S. 2014. Precision disease detection to enhance crop protection decisions in a changing climate. Agronomic Decision Making in an Uncertain Climate. Aspects of Applied Biology 125 . Association of Applied Biologists (AAB) Wellesbourne Warwick . pp. 95-98

Critical soil phosphate for combinable crops in Southern Britain

C1 - Edited contributions to conferences/learned societies
Morris, N., Knight, S., Poulton, P. R., Johnston, A. E. and Goulding, K. W. T. 2014. Critical soil phosphate for combinable crops in Southern Britain. Crop production in Southern Britain: precision decisions for profitable cropping. Aspects of Applied Biology 127 . Association of Applied Biologists (AAB) Wellesbourne Warwick . pp. 181-187

Impact of agronomic practices on arsenic accumulation and speciation in rice grain

A - Papers appearing in refereed journals
Ma, R., Shen, J., Wu, J., Tang, Z., Shen, Q. and Zhao, F-J. 2014. Impact of agronomic practices on arsenic accumulation and speciation in rice grain. Environmental Pollution. 194, pp. 217-223. https://doi.org/10.1016/j.envpol.2014.08.004

The GWmodel R package: further topics for exploring spatial heterogeneity using geographically weighted models

A - Papers appearing in refereed journals
Lu, B., Harris, P., Charlton, M. and Brunsdon, C. 2014. The GWmodel R package: further topics for exploring spatial heterogeneity using geographically weighted models. Geo-spatial Information Science. 17, pp. 85-101. https://doi.org/10.1080/10095020.2014.917453

Farmers' knowledge and perceptions of the stunting disease of Napier grass in Western Kenya

A - Papers appearing in refereed journals
Khan, Z. R., Midega, C. A. O., Nyang'au, I. M., Murage, A., Pittchar, J., Agutu, L. O., Amudavi, D. M. and Pickett, J. A. 2014. Farmers' knowledge and perceptions of the stunting disease of Napier grass in Western Kenya. Plant Pathology. 63 (6), pp. 1426-1435. https://doi.org/10.1111/ppa.12215

Changing concepts for the efficient use of phosphorus in agriculture

C1 - Edited contributions to conferences/learned societies
Johnston, A. E. and Poulton, P. R. 2014. Changing concepts for the efficient use of phosphorus in agriculture. International Fertiliser Society Proceedings 757. International Fertiliser Society (IFS). pp. 49pp

Healthy air - healthy plants - healthy people: methods for detection of air-borne pathogens and allergens

C2 - Non-edited contributions to conferences
Jedryczka, M., West, J. S., Kaczmarek, J., Latunde-Dada, A. O., Karolewski, Z. and Fitt, B. D. L. 2014. Healthy air - healthy plants - healthy people: methods for detection of air-borne pathogens and allergens. Abstracts 11th Conference of the European Foundation for Plant Pathology, Krakow, 8-13 September 2014 . pp. 101

The efficacy of flufenacet based herbicides on Alopecurus myosuroides (black-grass): analysis of data from 375 field trials

C1 - Edited contributions to conferences/learned societies
Hull, R. I., Clark, S. J., Westrup, L. and Moss, S. R. 2014. The efficacy of flufenacet based herbicides on Alopecurus myosuroides (black-grass): analysis of data from 375 field trials. Crop production in Southern Britain: precision decisions for profitable cropping. Aspects of Applied Biology 127 . Association of Applied Biologists (AAB) Wellesbourne Warwick . pp. 49-56

New developments in identification and quantification of airborne inoculum

B - Book chapters etc edited externally
Heard, S. and West, J. S. 2014. New developments in identification and quantification of airborne inoculum. in: Gullino, M. L. and Bonants, P. J. M. (ed.) Detection and diagnostics of plant pathogens (Plant Pathology in the 21st Century 5) Springer, Dordrecht. pp. 3-19

Final Report Defra Project WQ0126. Modular approaches to the control of diffuse agricultural pollution: buffer zones, bioreactors, ditches and ponds

D1 - Technical reports: non-confidential
Hawkins, J. M. B. and Blackwell, M. S. A. 2014. Final Report Defra Project WQ0126. Modular approaches to the control of diffuse agricultural pollution: buffer zones, bioreactors, ditches and ponds. Department for Environment, Food & Rural Affairs (DEFRA).

Geographically weighted methods and their use in network re-designs for environmental monitoring

A - Papers appearing in refereed journals
Harris, P., Clarke, A., Juggins, S., Brunsdon, C. and Charlton, M. 2014. Geographically weighted methods and their use in network re-designs for environmental monitoring. Stochastic Environmental Research and Risk Assessment. 28 (7), pp. 1869-1887. https://doi.org/10.1007/s00477-014-0851-1

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