The costs and efficacy of sediment mitigation measures for representative farm types across England and Wales

Collins, A. L., Zhang, Y. and Naden, P. 2014. The costs and efficacy of sediment mitigation measures for representative farm types across England and Wales. Proceedings Symposium on Sediment Dynamics from the Summit to the Sea, New Orleans, 11-14 December 2014 (IAHS Publication), Vol.367. International Association of Hydrological Sciences (IAHS) Press, Wallingford Oxford. pp. 382-388

Related outputs

Processed high resolution rainfall, flow rate, sediment and nitrate concentration data

N - Datasets

Zhang, Y. and Collins, A. L. 2024. Processed high resolution rainfall, flow rate, sediment and nitrate concentration data. Rothamsted Research. https://doi.org/10.23637/rothamsted.99117

A dataset of CMIP6-based climate scenarios for climate change impact assessment in Great Britain

A - Papers appearing in refereed journals

Semenov, M. A., Senapati, N., Coleman, K. and Collins, A. L. 2024. A dataset of CMIP6-based climate scenarios for climate change impact assessment in Great Britain. Data in Brief. 55 (4 July), p. 110709. https://doi.org/10.1016/j.dib.2024.110709

Willingness to adopt green house gas mitigation measures Agricultural land managers in the United Kingdom

A - Papers appearing in refereed journals

Jebari, A., Oyetunde-Usman, Z., Mcauliffe, G., Chivers, C. and Collins, A. L. 2024. Willingness to adopt green house gas mitigation measures Agricultural land managers in the United Kingdom. PLOS ONE. 19 (7), p. e0306443. https://doi.org/10.1371/journal.pone.0306443

Examining Agricultural Land Manager Willingness to Adopt Climate Change Mitigation in the UK

N - Datasets

Jebari, A., Oyetunde-Usman, Z., Mcauliffe, G., Chivers, C. and Collins, A. L. 2024. Examining Agricultural Land Manager Willingness to Adopt Climate Change Mitigation in the UK. Rothamsted Research. https://doi.org/10.23637/rothamsted.99058

UAV-based modelling of vegetation recovery under extreme habitat stresses in the water level fluctuation zone of the Three Gorges Reservoir, China

A - Papers appearing in refereed journals

Rao, J., Tang, Q., Duan, D., Xu, Y., Wei, J., Bao, Y., He, X. and Collins, A. L. 2024. UAV-based modelling of vegetation recovery under extreme habitat stresses in the water level fluctuation zone of the Three Gorges Reservoir, China. Science of the Total Environment. 924, p. 173185. https://doi.org/10.1016/j.scitotenv.2024.173185

The International Commission on Continental Erosion (ICCE): a brief overview of its scientific focus and example outputs

A - Papers appearing in refereed journals

Collins, A. L., Walling, D. E., Golosov, V., Porto, P., Gellis, A. C., Silva, Y. J. D. and Chalov, S. 2024. The International Commission on Continental Erosion (ICCE): a brief overview of its scientific focus and example outputs. Proceedings of the International Association of Hydrological Sciences - IAHS. 385, pp. 489-497. https://doi.org/10.5194/piahs-385-489-2024

Simulation dataset of annual crop growth, GHG emission and SOC stock dynamics under current and projected climate conditions for major crops with current and reduced fertiliser inputs in Southwest, England

A - Papers appearing in refereed journals

Zhang, Y., Wu, L., Jebari, A. and Collins, A. L. 2024. Simulation dataset of annual crop growth, GHG emission and SOC stock dynamics under current and projected climate conditions for major crops with current and reduced fertiliser inputs in Southwest, England . Data in Brief. 55 (August), p. 110574. https://doi.org/10.1016/j.dib.2024.110574

Hydro-sedimentological drivers of fine sediment ingress in a gravel-bed river

A - Papers appearing in refereed journals

Maltauro, R., Stone, M., Collins, A. L. and Krishnappan, B.G. 2024. Hydro-sedimentological drivers of fine sediment ingress in a gravel-bed river. Catena. 241, p. 108067. https://doi.org/10.1016/j.catena.2024.108067

High-frequency spatial sediment source fingerprinting using in situ absorbance data

A - Papers appearing in refereed journals

Lake, N., Martinez-Carreras, N., Shaw, P. J. and Collins, A. L. 2024. High-frequency spatial sediment source fingerprinting using in situ absorbance data. Journal of Hydrology. 643 (November), p. 131930. https://doi.org/10.1016/j.jhydrol.2024.131930

Potential unintended consequences of agricultural land use change driven by dietary transitions

A - Papers appearing in refereed journals

Blackwell, M. S. A., Takahashi, T., Cardenas, L. M., Collins, A. L., Enriquez, D., Griffith, B. A., Hunt, J., Lee, M. R. F., Misselbrook, T. H., Neal, A. L., Rivero, M. J., Shield, I. F., Storkey, J., Wu, L. and Harris, P. 2024. Potential unintended consequences of agricultural land use change driven by dietary transitions. npj sustainable agriculture. 2 (1). https://doi.org/10.1038/s44264-023-00008-8

Sugarcane cultivation as a major surface source of sediment in catchments from a coastal zone of Pernambuco, Brazil

A - Papers appearing in refereed journals

Nascimento, R. C., Maia, A. J., Santos de Oliveira, P. H., Agra Bezerra da Silva, Y. J., Williams Araujo do Nascimento, C., Tiecher,T. and Collins, A. L. 2024. Sugarcane cultivation as a major surface source of sediment in catchments from a coastal zone of Pernambuco, Brazil. Revista Brasileira de Ciencia do Solo. 48, p. e0230136. https://doi.org/10.36783/18069657rbcs20230136

Divergent behaviour of soil nutrients imprinted by different land management practices in the Three Gorges Reservoir Area, China

A - Papers appearing in refereed journals

Song, M., Tang, Q., Han, C., Yuan, C., Yang, Q, Wei, J., He, X., Lv, X. and Collins, A. L. 2024. Divergent behaviour of soil nutrients imprinted by different land management practices in the Three Gorges Reservoir Area, China. International Soil and Water Conservation Research. https://doi.org/10.1016/j.iswcr.2024.03.003

Source fingerprinting sediment loss from sub-catchments and topographic zones using geochemical tracers and weathering indices

A - Papers appearing in refereed journals

Derakhshan-Babaei, F., Nosrati, K., Fiener, P., Egli, M. and Collins, A. L. 2024. Source fingerprinting sediment loss from sub-catchments and topographic zones using geochemical tracers and weathering indices. Journal of Hydrology. 633, p. 131019. https://doi.org/10.1016/j.jhydrol.2024.131019

Comparison of sediment biomarker signatures generated using time-integrated and discrete suspended sediment samples

A - Papers appearing in refereed journals

Upadhayay, H. R., Granger, S. J. and Collins, A. L. 2024. Comparison of sediment biomarker signatures generated using time-integrated and discrete suspended sediment samples. Environmental Science and Pollution Research. https://doi.org/10.1007/s11356-024-32533-5

Farmland abandonment and vegetation succession mediate soil properties but are determined by the duration of conversion

A - Papers appearing in refereed journals

Lv, X., Tang, Q., Han, C., Song, M., Yuan, C., Yang, Q., Wei, J., He, X. and Collins, A. L. 2024. Farmland abandonment and vegetation succession mediate soil properties but are determined by the duration of conversion. Catena. 238 (April), p. 107877. https://doi.org/10.1016/j.catena.2024.107877

Evaluating Effective Particle Size Distributions of Cohesive Sediment under Varying Shear Stress and Bed Configurations in a Rotating Annular Flume

A - Papers appearing in refereed journals

Maltauro, R., Stone, M., Collins, A. L. and Krishnappan, B.G. 2024. Evaluating Effective Particle Size Distributions of Cohesive Sediment under Varying Shear Stress and Bed Configurations in a Rotating Annular Flume. Water. 16 (4), p. 546. https://doi.org/10.3390/w16040546

The sedimentology of gravel beds in groundwater-dominated chalk streams: Implications for sediment modelling and management

A - Papers appearing in refereed journals

Mondon, B., Sear, D. A., Collins, A. L., Shaw, P. J. and Sykes, T. 2024. The sedimentology of gravel beds in groundwater-dominated chalk streams: Implications for sediment modelling and management. River Research and Applications. 40 (4), pp. 508-528. https://doi.org/10.1002/rra.4250

Linking soil erosion and sediment yield with landscape heterogeneity: Exploration using the lower Jinsha River Basin, China

A - Papers appearing in refereed journals

Zhang, H., Lv, J., Bao, Y., Tang, Q., Collins, A. L., Khurram, D. and He, X. 2024. Linking soil erosion and sediment yield with landscape heterogeneity: Exploration using the lower Jinsha River Basin, China. Journal of Hydrology. 631, p. 130729. https://doi.org/10.1016/j.jhydrol.2024.130729

13C dicarboxylic acid signatures indicate temporal shifts in catchment sediment sources in response to extreme winter rainfall

A - Papers appearing in refereed journals

Upadhayay, H. R., Joynes, A. and Collins, A. L. 2024. 13C dicarboxylic acid signatures indicate temporal shifts in catchment sediment sources in response to extreme winter rainfall. Environmental Chemistry Letters. 22, pp. 499-504. https://doi.org/10.1007/s10311-023-01684-1

Feasibility of mitigation measures for agricultural greenhouse gas emissions in the UK. A systematic review

A - Papers appearing in refereed journals

Jebari, A., Pereyra, F., Kumar, A., Collins, A. L., Rivero, M. J. and Mcauliffe, G. 2024. Feasibility of mitigation measures for agricultural greenhouse gas emissions in the UK. A systematic review. Agronomy for Sustainable Development - ASD. 44 (2). https://doi.org/10.1007/s13593-023-00938-0

Soil erosion, sediment sources, connectivity and suspended sediment yields in UK temperate agricultural catchments Discrepancies and reconciliation of field-based measurements

A - Papers appearing in refereed journals

Pulley, S. and Collins, A. L. 2024. Soil erosion, sediment sources, connectivity and suspended sediment yields in UK temperate agricultural catchments Discrepancies and reconciliation of field-based measurements. Journal of Environmental Management. 351, p. 119810. https://doi.org/10.1016/j.jenvman.2023.119810

Impacts of reduced synthetic fertiliser use under current and future climates Exploration using integrated agroecosystem modelling in the upper River Taw observatory, UK

A - Papers appearing in refereed journals

Zhang, Y., Wu, L., Jebari, A. and Collins, A. L. 2024. Impacts of reduced synthetic fertiliser use under current and future climates Exploration using integrated agroecosystem modelling in the upper River Taw observatory, UK. Journal of Environmental Management. 351, p. 119732. https://doi.org/10.1016/j.jenvman.2023.119732

Challenges in measuring fine sediment ingress in gravel-bed rivers using retrievable sediment trap samplers

A - Papers appearing in refereed journals

Maltauro, R., Stone, M., Collins, A. L. and Krishnappan, B. G. 2023. Challenges in measuring fine sediment ingress in gravel-bed rivers using retrievable sediment trap samplers. River Research and Applications. 40 (3), pp. 341-352. https://doi.org/10.1002/rra.4237

Freshwater invertebrate responses to fine sediment stress A multi-continent perspective

A - Papers appearing in refereed journals

McKenzie, M., Brooks, A., Callisto, M., Collins, A. L., Durkota, J. M., Death, R. G., Iwan Jones, J., Linares, M. S., Matthaei, C. D., Monk, W. A., Murphy, J. A., Wagenhoff, A., Wilkes, M., Wood, P. J. and Mathers, K. L. 2023. Freshwater invertebrate responses to fine sediment stress A multi-continent perspective. Global Change Biology. 30 (1), p. e17084. https://doi.org/10.1111/gcb.17084

Bioenergy crop production and carbon sequestration potential under changing climate and land use - A case study in the upper River Taw catchment in southwest England

A - Papers appearing in refereed journals

Dixit, P. N., Richter, G. M., Coleman, K. and Collins, A. L. 2023. Bioenergy crop production and carbon sequestration potential under changing climate and land use - A case study in the upper River Taw catchment in southwest England. Science of the Total Environment. 900 (20 Nov), p. 166390. https://doi.org/10.1016/j.scitotenv.2023.166390

Evaluation of Legacy Forest Harvesting Impacts on Dominant Stream Water Sources and Implications for Water Quality Using End Member Mixing Analysis

A - Papers appearing in refereed journals

Fines, R. W., Stone, M., Webster, K. L., Leach, J. A., Buttle, J. M., Emelko, M. B and Collins, A. L. 2023. Evaluation of Legacy Forest Harvesting Impacts on Dominant Stream Water Sources and Implications for Water Quality Using End Member Mixing Analysis. Water. 15 (15), p. 2825. https://doi.org/10.3390/w15152825

Are single global warming potential impact assessments adequate for carbon footprints of agri-food systems?

A - Papers appearing in refereed journals

McAuliffe, G., Lynch, J., Cain, M., Buckingham, S., Rees, R. M., Collins, A. L., Allen, M., Pierrehumbert, R., Lee, M. R. F. and Takahashi, T. 2023. Are single global warming potential impact assessments adequate for carbon footprints of agri-food systems? Environmental Research Letters. 18 (8), p. 084014. https://doi.org/10.1088/1748-9326/ace204

Do NO, N2O, N2 and N2 fluxes differ in soils sourced from cropland and varying riparian buffer vegetation? An incubation study

A - Papers appearing in refereed journals

Dlamini, J. C., Tesfamariam, E. H., Verbeeck, M., Loick, N., Louro-Lopez, A., Hawkins, J. M. B., Blackwell, M. S. A., Dunn, R., Collins, A. L. and Cardenas, L. M. 2023. Do NO, N2O, N2 and N2 fluxes differ in soils sourced from cropland and varying riparian buffer vegetation? An incubation study. Soil Use and Management. 40 (1), p. e12951. https://doi.org/10.1111/sum.12951

The soil organic carbon: Clay ratio in North Devon, UK: Implications for marketing soil carbon as an asset class

A - Papers appearing in refereed journals

Pulley, S., Taylor, H., Prout, J., Haefele, S. M. and Collins, A. L. 2023. The soil organic carbon: Clay ratio in North Devon, UK: Implications for marketing soil carbon as an asset class. Soil Use and Management. 39 (3), pp. 1068-1081. https://doi.org/10.1111/sum.12920

The spatio-temporal dynamics of suspended sediment sources based on a novel indexing approach combining Bayesian geochemical fingerprinting with physically-based modelling

A - Papers appearing in refereed journals

Das, A., Remesan, R., Collins, A. L. and Kumar Gupta, A. 2023. The spatio-temporal dynamics of suspended sediment sources based on a novel indexing approach combining Bayesian geochemical fingerprinting with physically-based modelling. Journal of Environmental Management. 345, p. 118649. https://doi.org/10.1016/j.jenvman.2023.118649

A commentary on key methodological developments related to nutritional life cycle assessment (nLCA) generated throughout a 6-year strategic scientific programme

A - Papers appearing in refereed journals

McAuliffe, G., Takahashi, T., Lee, M. R. F., Jebari, A., Cardenas, L. M., Kumar, A., Pereyra-Goday, F., Scalabrino, H. and Collins, A. L. 2023. A commentary on key methodological developments related to nutritional life cycle assessment (nLCA) generated throughout a 6-year strategic scientific programme. Food and Energy Security. 12 (4), p. e480. https://doi.org/10.1002/fes3.480

What do macroinvertebrate indices measure? Stressor-specific stream macroinvertebrate indices can be confounded by other stressors

A - Papers appearing in refereed journals

Jones, J. I., Lloyd, C. E. M., Murphy, J. F., Arnold, A., Duerdoth, C. P., Hawczak, A., Pretty, J. L., Johnes, P. J., Freer, J. E., Stirling, M. W., Richmond, C. and Collins, A. L. 2023. What do macroinvertebrate indices measure? Stressor-specific stream macroinvertebrate indices can be confounded by other stressors. Freshwater Biology. 68 (8), pp. 1330-1345. https://doi.org/10.1111/fwb.14106

Soil carbon dioxide (CO2) fluxes in permanent upslope pasture and downslope riparian buffers with varying vegetation

A - Papers appearing in refereed journals

Dlamini, J., Tesfamariam, E. H., Dunn, R., Hood, J., Hawkins, J. M. B., Blackwell, M. S. A., Collins, A. L. and Cardenas, L. M. 2023. Soil carbon dioxide (CO2) fluxes in permanent upslope pasture and downslope riparian buffers with varying vegetation. Journal of Plant Nutrition and Soil Science. 186 (4), pp. 406-416. https://doi.org/10.1002/jpln.202100292

Hydro-chemical responses at different scales in a rural catchment, UK, and implications for managing the unintended consequences of agriculture

A - Papers appearing in refereed journals

Granger, S. J., Upadhayay, H. and Collins, A. L. 2023. Hydro-chemical responses at different scales in a rural catchment, UK, and implications for managing the unintended consequences of agriculture. Environmental Research. 228, p. 115826. https://doi.org/10.1016/j.envres.2023.115826

Investigating the effect of seismicity on spatial sediment sources and loads using the fingerprinting approach

A - Papers appearing in refereed journals

Ashtari, N., Nosrati, K., Ommi, S. and Collins, A. L. 2023. Investigating the effect of seismicity on spatial sediment sources and loads using the fingerprinting approach. Catena. 227 (15 June), p. 107091. https://doi.org/10.1016/j.catena.2023.107091

Post-farming land restoration schemes exhibit higher soil aggregate stability and organic carbon: Evidence in the Three Gorges Reservoir Area, China

A - Papers appearing in refereed journals

Han, C., Song, M., Tang, Q, Wei, J., He, X. and Collins, A. L. 2023. Post-farming land restoration schemes exhibit higher soil aggregate stability and organic carbon: Evidence in the Three Gorges Reservoir Area, China. Catena. 227, p. 107099. https://doi.org/10.1016/j.catena.2023.107099

The effect of shear-dependent flocculation on the multimodality of effective particle size distributions in a gravel-bed river during high flows

A - Papers appearing in refereed journals

Maltauro, R., Stone, M., Collins, A. L., Krishnappan, B. G. and Silins, U. 2023. The effect of shear-dependent flocculation on the multimodality of effective particle size distributions in a gravel-bed river during high flows. Journal of Soils and Sediments. 23, pp. 3589-3601. https://doi.org/10.1007/s11368-023-03455-5

Using the colour of recent overbank sediment deposits in two large catchments to determine sediment sources for targeting mitigation of catchment-specific management issues

A - Papers appearing in refereed journals

Pulley, S. and Collins, A. L. 2023. Using the colour of recent overbank sediment deposits in two large catchments to determine sediment sources for targeting mitigation of catchment-specific management issues. Journal of Environmental Management. 336, p. 117657. https://doi.org/10.1016/j.jenvman.2023.117657

Use of a submersible spectrophotometer probe to fingerprint spatial suspended sediment sources at catchment scale

A - Papers appearing in refereed journals

Lake, N., Martinez-Carreras, N., Iffly, J. F., Shaw, P. J. and Collins, A. L. 2023. Use of a submersible spectrophotometer probe to fingerprint spatial suspended sediment sources at catchment scale. Science of the Total Environment. 873, p. 162332. https://doi.org/10.1016/j.scitotenv.2023.162332

Water chemistry of combined surface and subsurface runoff from the North Wyke Farm Platform, with hydrologically isolated catchments sown with different pasture types.

N - Datasets

Granger, S. J., Quincke, J. A., Carswell, A. M., Olde, L., Darch, T., Peukert, S., Horrocks, C. A., Dixon, E. R., Collins, A. L., Blackwell, M. S. A., Murray, P. J., Dungait, J. A. J. and Harris, P. 2023. Water chemistry of combined surface and subsurface runoff from the North Wyke Farm Platform, with hydrologically isolated catchments sown with different pasture types. Rothamsted Research. https://doi.org/10.23637/rothamsted.98v27

Sediment source apportionment using geochemical composite signatures in a large and polluted river system with a semiarid-coastal interface, Brazil

A - Papers appearing in refereed journals

Nascimento, R. C., Maia, A .J., Agra Bezerra da Silva, Y. J., Amorim, F. F., Williams Araújo do Nascimento, C., Tiecher, T., Evrard, O., Collins, A. L., Biondi, C. M. and Agra Bezerra da Silva, Y. J. 2023. Sediment source apportionment using geochemical composite signatures in a large and polluted river system with a semiarid-coastal interface, Brazil. Catena. 220, Part B, p. 106710. https://doi.org/10.1016/j.catena.2022.106710

(Un)willingness to contribute financially towards advice surrounding diffuse water pollution - the perspectives of farmers and advisors

A - Papers appearing in refereed journals

Chivers, C. and Collins, A. L. 2023. (Un)willingness to contribute financially towards advice surrounding diffuse water pollution - the perspectives of farmers and advisors. The Journal of Agricultural Education and Extension. 29 (3), pp. 327-350. https://doi.org/10.1080/1389224X.2022.2043917

Optimisation of Cereal Farm Strategies for Mitigating Externalities Associated with Intensive Production

A - Papers appearing in refereed journals

Collins, A. L. and Zhang, Y. 2022. Optimisation of Cereal Farm Strategies for Mitigating Externalities Associated with Intensive Production. Water. 15 (1), p. 169. https://doi.org/10.3390/w15010169

Protein quality as a complementary functional unit in life cycle assessment (LCA)

A - Papers appearing in refereed journals

McAuliffe, G., Takahashi, T., Beal, T., Huppertz, T., Leroy, F., Buttriss, J., Collins, A. L., Drewnowski, A., McLaren, S. J., Ortenzi, F., Van der Pols, J., Van Vliet, S. and Lee, M. R. F. 2022. Protein quality as a complementary functional unit in life cycle assessment (LCA). International Journal of Life Cycle Assessment. 28 (2), pp. 146-155. https://doi.org/10.1007/s11367-022-02123-z

A reconnaissance survey of channel bank particulate phosphorus concentrations, controls and estimated contributions to riverine loads across England

A - Papers appearing in refereed journals

Pulley, S., Zhang, Y., Copeland-Phillips, R., Vadher, A. N., Foster, I. D. L, Boardman, J. and Collins, A. L. 2022. A reconnaissance survey of channel bank particulate phosphorus concentrations, controls and estimated contributions to riverine loads across England. Hydrological Processes. 35 (12), p. e14785. https://doi.org/10.1002/hyp.14785

Impacts of different vegetation in riparian buffer strips on runoff and sediment loss

A - Papers appearing in refereed journals

Dunn, R. M., Hawkins, J. M. B., Blackwell, M. S. A., Zhang, Y. and Collins, A. L. 2022. Impacts of different vegetation in riparian buffer strips on runoff and sediment loss. Hydrological Processes. 36 (11), p. e14733. https://doi.org/10.1002/hyp.14733

Using particle size distributions to fingerprint suspended sediment sources Evaluation at laboratory and catchment scales

A - Papers appearing in refereed journals

Lake, N. F., Martinez-Carreras, N., Shaw, P. J. and Collins, A. L. 2022. Using particle size distributions to fingerprint suspended sediment sources Evaluation at laboratory and catchment scales. Hydrological Processes. 36 (10), p. e14726. https://doi.org/10.1002/hyp.14726

Data, and sample sources thereof, on water quality life cycle impact assessments pertaining to catchment scale acidification and eutrophication potentials and the benefits of on-farm mitigation strategies

A - Papers appearing in refereed journals

McAuliffe, G.A., Zhang, Y. and Collins, A. L. 2022. Data, and sample sources thereof, on water quality life cycle impact assessments pertaining to catchment scale acidification and eutrophication potentials and the benefits of on-farm mitigation strategies. Data in Brief. 44, p. 108505. https://doi.org/10.1016/j.dib.2022.108505

Applying geochemical and colour properties to quantify sediment sources in a Brazilian semiarid ephemeral river system

A - Papers appearing in refereed journals

Nascimento, R. C., Maia, A. J., Bezerra da Silva, Y .J. A., Amorim, F. F., Araujo do Nascimento, W. C., Tiecher, T., Evrard, O., Collins, A. L., Biondi, C. M. and Bezerra da Silva, Y .J. A. 2022. Applying geochemical and colour properties to quantify sediment sources in a Brazilian semiarid ephemeral river system. Journal of Hydrology. 613 (A), p. 128360. https://doi.org/10.1016/j.jhydrol.2022.128360

Soil CO2 emissions in cropland with fodder maize (Zea mays L.) with and without riparian buffer strips of differing vegetation

A - Papers appearing in refereed journals

Dlamini, J., Cardenas, L. M., Tesfamariam, E. H., Dunn, R. M., Hawkins, J. M. B., Blackwell, M. S. A. and Collins, A. L. 2022. Soil CO2 emissions in cropland with fodder maize (Zea mays L.) with and without riparian buffer strips of differing vegetation. Agroforestry Systems. 96, pp. 983-995. https://doi.org/10.1007/s10457-022-00756-5

Separating natural from human enhanced methane emissions in headwater streams

A - Papers appearing in refereed journals

Zhu, Y., Iwan Jones, J., Collins, A. L., Zhang, Y., Olde, L., Rovelli, L., Murphy, J. F., Heppell, C. M. and Trimmer, M. 2022. Separating natural from human enhanced methane emissions in headwater streams. Nature Communications. 13, p. 3810. https://doi.org/10.1038/s41467-022-31559-y

Assessing catchment scale water quality of agri-food systems and the scope for reducing unintended consequences using spatial life cycle assessment (LCA)

A - Papers appearing in refereed journals

McAuliffe, G. A., Zhang, Y. and Collins, A. L. 2022. Assessing catchment scale water quality of agri-food systems and the scope for reducing unintended consequences using spatial life cycle assessment (LCA). Journal of Environmental Management. 318 (15 Sept), p. 115563. https://doi.org/10.1016/j.jenvman.2022.115563

Riparian buffer strips influence nitrogen losses as nitrous oxide and leached N from upslope permanent pasture

A - Papers appearing in refereed journals

Dlamini, J., Cardenas, L. M., Tesfamariam, E.H., Dunn, R. M., Loick, N., Charteris, A., Cocciaglia, L., Vangeli,S., Blackwell, M. S. A., Upadhayay, H., Hawkins, J. M. B., Evans, J. and Collins, A. L. 2022. Riparian buffer strips influence nitrogen losses as nitrous oxide and leached N from upslope permanent pasture. Agriculture, Ecosystems & Environment. 336 (15 September), p. 108031. https://doi.org/10.1016/j.agee.2022.108031

Soil N2O and CH4 emissions from fodder maize production with and without riparian buffer strips of differing vegetation

A - Papers appearing in refereed journals

Dlamini, J., Cardenas, L. M., Tesfamariam, E. H., Dunn, R., Evans, J., Hawkins, J. M. B., Blackwell, M. S. A. and Collins, A. L. 2022. Soil N2O and CH4 emissions from fodder maize production with and without riparian buffer strips of differing vegetation. Plant and Soil. 477, pp. 297-318. https://doi.org/10.1007/s11104-022-05426-0

Prolonged heavy rainfall and land use drive catchment sediment source dynamics: appraisal using multiple biotracers

A - Papers appearing in refereed journals

Upadhayay, H. R., Zhang, Y., Granger, S. J., Micale, M. and Collins, A. L. 2022. Prolonged heavy rainfall and land use drive catchment sediment source dynamics: appraisal using multiple biotracers. Water Research. 216, p. 118348. https://doi.org/10.1016/j.watres.2022.118348

Monitored flow and water quality data from upper river taw observatory in 2018 and 2019 water years

N - Datasets

Granger, S. J., Zhang, Y., Sint, H. M. and Collins, A. L. 2022. Monitored flow and water quality data from upper river taw observatory in 2018 and 2019 water years. Rothamsted Research. https://doi.org/10.23637/rothamsted.9882v

A rapid and inexpensive colour-based sediment tracing method incorporating hydrogen peroxide sample treatment as an alternative to quantitative source fingerprinting for catchment management

A - Papers appearing in refereed journals

Pulley, S. and Collins, A. L. 2022. A rapid and inexpensive colour-based sediment tracing method incorporating hydrogen peroxide sample treatment as an alternative to quantitative source fingerprinting for catchment management. Journal of Environmental Management. 311 (1 June), p. 114780. https://doi.org/10.1016/j.jenvman.2022.114780

Coupled steroid and phosphorus leaching from cattle slurry at lysimeter scale

A - Papers appearing in refereed journals

Manley, A., Collins, A. L., Joynes, A., Mellander, P-E. and Jordan, P. 2022. Coupled steroid and phosphorus leaching from cattle slurry at lysimeter scale. Journal of Contaminant Hydrology. 247 (May), p. 103979. https://doi.org/10.1016/j.jconhyd.2022.103979

Exploring the effects of land management change on productivity, carbon and nutrient balance: Application of an Ensemble Modelling Approach to the upper River Taw observatory, UK

A - Papers appearing in refereed journals

Hassall, K. L., Coleman, K., Dixit, P., Granger, S. J., Zhang, Y., Sharp, R., Wu, L., Whitmore, A. P., Richter, G. M., Collins, A. L. and Milne, A. E. 2022. Exploring the effects of land management change on productivity, carbon and nutrient balance: Application of an Ensemble Modelling Approach to the upper River Taw observatory, UK. Science of the Total Environment. 824, p. 153824. https://doi.org/10.1016/j.scitotenv.2022.153824

Diffuse water pollution during recent extreme wet-weather in the UK: Environmental damage costs and insight into the future?

A - Papers appearing in refereed journals

Zhang, Y., Granger, S. J., Semenov, M. A., Upadhayay, H. and Collins, A. L. 2022. Diffuse water pollution during recent extreme wet-weather in the UK: Environmental damage costs and insight into the future? Journal of Cleaner Production. 338, p. 130633. https://doi.org/10.1016/j.jclepro.2022.130633

Tackling unintended consequences of grazing livestock farming: Multi-scale assessment of co-benefits and trade-offs for water pollution mitigation scenarios

A - Papers appearing in refereed journals

Zhang, Y., Griffith, B. A., Granger, S. J., Sint, H. M. and Collins, A. L. 2022. Tackling unintended consequences of grazing livestock farming: Multi-scale assessment of co-benefits and trade-offs for water pollution mitigation scenarios. Journal of Cleaner Production. 336 (15 Feb), p. 130449. https://doi.org/10.1016/j.jclepro.2022.130449

The efficiency of elemental geochemistry and weathering indices as tracers in aeolian sediment provenance fingerprinting

A - Papers appearing in refereed journals

Nosrati, K., Moradian, H., Dolatkordestani, M., Mol, L. and Collins, A. L. 2022. The efficiency of elemental geochemistry and weathering indices as tracers in aeolian sediment provenance fingerprinting. Catena. 210 (March 2022), p. 105932. https://doi.org/10.1016/j.catena.2021.105932

Combining targeted grass traits with red clover improves grassland performance and reduces need for nitrogen fertilisation

A - Papers appearing in refereed journals

Carswell, A. M., Sanchez-Rodriguez, A. F., Saunders, K. S., Le Cocq, K., Shaw, R., Cotton, J., Zhang, Y., Evans, J., Chadwick, D. R., Jones, D. L. and Misselbrook, T. H. 2022. Combining targeted grass traits with red clover improves grassland performance and reduces need for nitrogen fertilisation. European Journal of Agronomy. 133, p. 126433. https://doi.org/10.1016/j.eja.2021.126433

Soil methane (CH4) fluxes in cropland with permanent pasture and riparian buffer strips with different vegetation

A - Papers appearing in refereed journals

Dlamini, J., Cardenas, L. M., Tesfamariam, E. H., Dunn, R. M., Hawkins, J. M. B., Blackwell, M. S. A., Evans, J. and Collins, A. L. 2021. Soil methane (CH4) fluxes in cropland with permanent pasture and riparian buffer strips with different vegetation. Journal of Plant Nutrition and Soil Science. https://doi.org/10.1002/jpln.202000473

Quantifying the provenance of dune sediments in the Taklimakan Desert using machine learning, multidimensional scaling and sediment source fingerprinting

A - Papers appearing in refereed journals

Song, Y., Chen, X., Li, Y., Fan, Y. and Collins, A. L. 2021. Quantifying the provenance of dune sediments in the Taklimakan Desert using machine learning, multidimensional scaling and sediment source fingerprinting. Catena. 210, p. 105902. https://doi.org/10.1016/j.catena.2021.105902

Natural and anthropogenic impacts on the geochemical composition and metal speciation of fine sediment in a glacier-fed Canadian river basin

A - Papers appearing in refereed journals

Stone, M., Collins, A. L. and Laceby, J. P. 2021. Natural and anthropogenic impacts on the geochemical composition and metal speciation of fine sediment in a glacier-fed Canadian river basin. Journal of Soils and Sediments. 22, pp. 365-380. https://doi.org/10.1007/s11368-021-03079-7

High frequency un-mixing of soil samples using a submerged spectrophotometer in a laboratory setting—implications for sediment fingerprinting

A - Papers appearing in refereed journals

Lake, N. F., Martínez-Carreras, N., Shaw, P. J. and Collins, A. L. 2021. High frequency un-mixing of soil samples using a submerged spectrophotometer in a laboratory setting—implications for sediment fingerprinting. Journal of Soils and Sediments. https://doi.org/10.1007/s11368-021-03107-6

Sediment detachment by raindrop impact on grassland and arable fields an investigation of controls

A - Papers appearing in refereed journals

Pulley, S., Morten, C., Morgan, S., Cardenas, L. M. and Collins, A. L. 2021. Sediment detachment by raindrop impact on grassland and arable fields an investigation of controls . Journal of Soils and Sediments. https://doi.org/10.1007/s11368-021-03098-4

Anthropogenic and Climate-Exacerbated Landscape Disturbances Converge to Alter Phosphorus Bioavailability in an Oligotrophic River

A - Papers appearing in refereed journals

Watt, C., Emelko, M. B., Silins, U., Collins, A. L. and Stone, M. 2021. Anthropogenic and Climate-Exacerbated Landscape Disturbances Converge to Alter Phosphorus Bioavailability in an Oligotrophic River. Water. 13 (22), p. 3151. https://doi.org/10.3390/w13223151

Desertifcation of Iran in the early twenty‑first century: assessment using climate and vegetation indices

A - Papers appearing in refereed journals

Eskandari Dameneh, H., Gholami, H., Telfer, M. W, Comino, J. R., Collins, A. L. and Jansen, J. D. 2021. Desertifcation of Iran in the early twenty‑first century: assessment using climate and vegetation indices. Scientific Reports. 11, p. 20548. https://doi.org/10.1038/s41598-021-99636-8

Anthropogenic sediment traps and network dislocation in a lowland UK river

A - Papers appearing in refereed journals

Foster, I. D. L, Boardman, J., Evans, J. L., Copeland-Phillips, R., Vadher, A. N., Wright, S., Collins, A. L. and Manning, C. 2021. Anthropogenic sediment traps and network dislocation in a lowland UK river. Earth Surface Processes And Landforms. pp. 1-16. https://doi.org/10.1002/esp.5235

A New Framework for Modelling Fine Sediment Transport in Rivers Includes Flocculation to Inform Reservoir Management in Wildfire Impacted Watersheds

A - Papers appearing in refereed journals

Stone, M., Krishnappan, B. G., Silins, U., Emelko, M. B., Williams, C. H. S., Collins, A. L. and Spencer, S. A. 2021. A New Framework for Modelling Fine Sediment Transport in Rivers Includes Flocculation to Inform Reservoir Management in Wildfire Impacted Watersheds. Water. 13 (17), p. 2319. https://doi.org/10.3390/w13172319

Integrated modelling for mapping spatial sources of dust in central Asia - An important dust source in the global atmospheric system

A - Papers appearing in refereed journals

Gholami, H., Mohammadifar, A., Malakooti, H., Esmaeilpour, Y., Golzari, S., Mohammadi, F., Li, Y., Song, Y., Kaskaoutis, D.G., Fitzsimmons, K.E. and Collins, A. L. 2021. Integrated modelling for mapping spatial sources of dust in central Asia - An important dust source in the global atmospheric system. Atmospheric Pollution Research. 12 (9), p. 101173. https://doi.org/10.1016/j.apr.2021.101173

Insights into bulk stable isotope alteration during sediment redistribution to edge-of-field: impact on sediment source apportionment

A - Papers appearing in refereed journals

Upadhayay, H. R., Granger, S. J., Zhang, Y., Amorim, F., Cilione, L., Micale, M. and Collins, A. L. 2021. Insights into bulk stable isotope alteration during sediment redistribution to edge-of-field: impact on sediment source apportionment. Biogeochemistry. 155, pp. 263-281. https://doi.org/10.1007/s10533-021-00825-4

Attribution of runoff changes in the main tributaries of the middle Yellow River, China, based on the Budyko model with a time-varying parameter

A - Papers appearing in refereed journals

Li, H., Shi, C, Sun, P, Zhang, Y. and Collins, A. L. 2021. Attribution of runoff changes in the main tributaries of the middle Yellow River, China, based on the Budyko model with a time-varying parameter. Catena. 206 (105557). https://doi.org/10.1016/j.catena.2021.105557

The scope for a system-based approach to determine fine sediment targets for chalk streams

A - Papers appearing in refereed journals

Mondon, B., Sear, D. A., Collins, A. L., Shaw, P. J. and Sykes, T. 2021. The scope for a system-based approach to determine fine sediment targets for chalk streams . Catena. 206 (105541). https://doi.org/10.1016/j.catena.2021.105541

The potential for colour to provide a robust alternative to high-cost sediment source fingerprinting: Assessment using eight catchments in England

A - Papers appearing in refereed journals

Pulley, S. and Collins, A. L. 2021. The potential for colour to provide a robust alternative to high-cost sediment source fingerprinting: Assessment using eight catchments in England. Science of the Total Environment. 792 (20 Oct), p. 148416. https://doi.org/10.1016/j.scitotenv.2021.148416

Distribution of rare earth elements in soils of contrasting geological and pedological settings to support human health assessment and environmental policies

A - Papers appearing in refereed journals

Landim, J. S. P., Da Silva, Y. J. A. B., Do Nascimento, C. W. A., Da Silva, Y. J. A. B., Nascimento, R. C., Boechat, C. L., Silva, C. M. C. A. C., De Olinda, R.A., Barbosa, R. S., Dos Santos Silva, T., Biondi, C. M. and Collins, A. L. 2021. Distribution of rare earth elements in soils of contrasting geological and pedological settings to support human health assessment and environmental policies. Environmental Geochemistry And Health. https://doi.org/10.1007/s10653-021-00993-0

Can agri-environment initiatives control sediment loss in the context of extreme winter rainfall?

A - Papers appearing in refereed journals

Pulley, S. and Collins, A. L. 2021. Can agri-environment initiatives control sediment loss in the context of extreme winter rainfall? Journal of Cleaner Production. 311, p. 127593. https://doi.org/10.1016/j.jclepro.2021.127593

Baseline and business-as-usual (BAU) agricultural footprints for major farm types across England

N - Datasets

Zhang, Y. and Collins, A. L. 2021. Baseline and business-as-usual (BAU) agricultural footprints for major farm types across England. Rothamsted Research. https://doi.org/10.23637/rothamsted.98497

Deposition and erosion behaviour of cohesive sediments in the upper River Taw observatory, southwest UK: Implications for management and modelling

A - Papers appearing in refereed journals

Stone, M, Krishnappan, B. G., Granger, S. J., Upadhayay, H., Zhang, Y., Chivers, C., Decent, Q. and Collins, A. L. 2021. Deposition and erosion behaviour of cohesive sediments in the upper River Taw observatory, southwest UK: Implications for management and modelling. Journal of Hydrology. 598 (126145). https://doi.org/10.1016/j.jhydrol.2021.126145

Spatial modelling of soil salinity: deep or shallow learning models?

A - Papers appearing in refereed journals

Mohammadifar, A., Gholami, H., Golzari, S. and Collins, A. L. 2021. Spatial modelling of soil salinity: deep or shallow learning models? Environmental Science and Pollution Research. 28, pp. 39432-39450. https://doi.org/10.1007/s11356-021-13503-7

Predicting land susceptibility to atmospheric dust emissions in central Iran by combining integrated data mining and a regional climate model

A - Papers appearing in refereed journals

Gholami, H., Mohamadifar, A., Rahimi, S., Kaskaoutis, D.G. and Collins, A. L. 2021. Predicting land susceptibility to atmospheric dust emissions in central Iran by combining integrated data mining and a regional climate model . Atmospheric Pollution Research. 12 (4), pp. 172-187. https://doi.org/10.1016/j.apr.2021.03.005

Elucidating suspended sediment dynamics in a glacierized catchment after an exceptional erosion event: The Djankuat catchment, Caucasus Mountains, Russia

A - Papers appearing in refereed journals

Tsyplenkov, A., Vanmaercke, M., Collins, A. L., Kharchenko, S. and Golosov, V. 2021. Elucidating suspended sediment dynamics in a glacierized catchment after an exceptional erosion event: The Djankuat catchment, Caucasus Mountains, Russia. Catena. 203 (105285). https://doi.org/10.1016/j.catena.2021.105285

Novel approaches to investigating spatial variability in channel bank total phosphorus at the catchment scale

A - Papers appearing in refereed journals

Granger, S. J., Harris, P., Upadhayay, H., Sint, H. M., Pulley, S., Stone, M., Krishnappan, B. G. and Collins, A. L. 2021. Novel approaches to investigating spatial variability in channel bank total phosphorus at the catchment scale. Catena. 202 (article), p. 105223. https://doi.org/10.1016/j.catena.2021.105223

Elucidating intra-storm variations in suspended sediment sources using a Bayesian fingerprinting approach

A - Papers appearing in refereed journals

Nosrati, K., Mohammadi-Raigani, Z., Haddadchi, A. and Collins, A. L. 2021. Elucidating intra-storm variations in suspended sediment sources using a Bayesian fingerprinting approach. Journal of Hydrology. 596 (article), p. 126115. https://doi.org/10.1016/j.jhydrol.2021.126115

Sediment source apportionment using optical property composite signatures in a rural catchment, Brazil

A - Papers appearing in refereed journals

Amorim, F. F., Da Silva, Y. J. A. B., Nascimento, R. C., Tiecher, T., Do Nascimento, C. W. A., Minella, J. P. G., Zhang, Y., Upadhayay, H., Pulley, S. and Collins, A. L. 2021. Sediment source apportionment using optical property composite signatures in a rural catchment, Brazil. Catena. 202 (article), p. 105208. https://doi.org/10.1016/j.catena.2021.105208

Does cattle and sheep grazing under best management significantly elevate sediment losses? Evidence from the North Wyke Farm Platform, UK

A - Papers appearing in refereed journals

Pulley, S., Cardenas, L. M., Grau, P., Mullan, S., Rivero, M. J. and Collins, A. L. 2021. Does cattle and sheep grazing under best management significantly elevate sediment losses? Evidence from the North Wyke Farm Platform, UK. Journal of Soils and Sediments. 21, pp. 1875-1889. https://doi.org/10.1007/s11368-021-02909-y

Dynamics of fluvial hydro-sedimentological, nutrient, particulate organic matter and effective particle size responses during the U.K. extreme wet winter of 2019–2020

A - Papers appearing in refereed journals

Upadhayay, H., Granger, S. J. and Collins, A. L. 2021. Dynamics of fluvial hydro-sedimentological, nutrient, particulate organic matter and effective particle size responses during the U.K. extreme wet winter of 2019–2020. Science of the Total Environment. 774 (article), p. 145722. https://doi.org/10.1016/j.scitotenv.2021.145722

Using the Boruta algorithm and deep learning models for mapping land susceptibility to atmospheric dust emissions in Iran

A - Papers appearing in refereed journals

Gholami, H., Mohammadifar, A., Golzari, S., Kaskaoutis, D.G. and Collins, A. L. 2021. Using the Boruta algorithm and deep learning models for mapping land susceptibility to atmospheric dust emissions in Iran. Aeolian Research. 50 (article), p. 100682. https://doi.org/10.1016/j.aeolia.2021.100682

Accumulation of trace metals in freshwater macroinvertebrates across metal contamination gradients

A - Papers appearing in refereed journals

Arnold, A., Murphy, J .F., Pretty, J. L., Duerdoth, C. P., Smith, B. D., Rainbow, P. S., Spencer, K. L., Collins, A. L. and Iwan Jones, J. 2021. Accumulation of trace metals in freshwater macroinvertebrates across metal contamination gradients. Environmental Pollution. 276 (116721). https://doi.org/10.1016/j.envpol.2021.116721

Hillslope and groundwater contributions to streamflow in a Rocky Mountain watershed underlain by glacial till and fractured sedimentary bedrock

A - Papers appearing in refereed journals

Spencer, S. A., Anderson, A. E., Silins, U. and Collins, A. L. 2021. Hillslope and groundwater contributions to streamflow in a Rocky Mountain watershed underlain by glacial till and fractured sedimentary bedrock. Hydrology And Earth System Sciences. 25 (1), pp. 237-255. https://doi.org/10.5194/hess-25-237-2021

An exploratory study on the use of different composite magnetic and colour fingerprints in aeolian sediment provenance fingerprinting

A - Papers appearing in refereed journals

Nosrati, K, Akbari-Mahdiabad, M., Ayoubi, S. and Collins, A. L. 2021. An exploratory study on the use of different composite magnetic and colour fingerprints in aeolian sediment provenance fingerprinting. Catena. 200, p. 105182. https://doi.org/10.1016/j.catena.2021.105182

Assessment of the interpretability of data mining for the spatial modelling of water erosion using game theory

A - Papers appearing in refereed journals

Mohammadifar, A., Gholami, H., Comino, J. R. and Collins, A. L. 2021. Assessment of the interpretability of data mining for the spatial modelling of water erosion using game theory. Catena. 200, p. 105178. https://doi.org/10.1016/j.catena.2021.105178

Using different size fractions to source fingerprint fine-grained channel bed sediment in a large drainage basin in Iran

A - Papers appearing in refereed journals

Nosrati, K., Akbari-Mahdiabad, M., Fiener, P. and Collins, A. L. 2021. Using different size fractions to source fingerprint fine-grained channel bed sediment in a large drainage basin in Iran. Catena. 200, p. 105173. https://doi.org/10.1016/j.catena.2021.105173

Current advisory interventions for grazing ruminant farming cannot close exceedance of modern background sediment loss – Assessment using an instrumented farm platform and modelled scaling out

A - Papers appearing in refereed journals

Collins, A. L., Zhang, Y., Upadhayay, H., Pulley, S., Granger, S. J., Harris, P., Sint, H. M. and Griffith, B. A. 2021. Current advisory interventions for grazing ruminant farming cannot close exceedance of modern background sediment loss – Assessment using an instrumented farm platform and modelled scaling out. Environmental Science & Policy. 116 (2021), pp. 114-127. https://doi.org/10.1016/j.envsci.2020.11.004

Soil loss on the arable lands of the forest-steppe and steppe zones of European Russia and Siberia during the period of intensive agriculture

A - Papers appearing in refereed journals

Golosov, V. N., Collins, A. L., Dobrovolskaya, N. G., Bazhenova, O. I., Ryzhov, Y. V. and Sidorchuk, A. Y. 2021. Soil loss on the arable lands of the forest-steppe and steppe zones of European Russia and Siberia during the period of intensive agriculture . Geoderma. 381 (January), p. 114678. https://doi.org/10.1016/j.geoderma.2020.114678

Mapping wind erosion hazard with regression-based machine learning algorithms

A - Papers appearing in refereed journals

Gholami, H., Mohammadifar, A., Bui, D.T. and Collins, A. L. 2020. Mapping wind erosion hazard with regression-based machine learning algorithms. Scientific Reports. 10, p. 20494. https://doi.org/10.1038/s41598-020-77567-0

Comparing Extraction Methods for Biomarker Steroid Characterisation from Soil and Slurry

A - Papers appearing in refereed journals

Manley, A., Collins, A. L., Joynes, A., Mellander, P. E. and Jordan, P. 2020. Comparing Extraction Methods for Biomarker Steroid Characterisation from Soil and Slurry. Water Air And Soil Pollution. 231 (10), pp. 1-15. https://doi.org/10.1007/s11270-020-04871-w

Using catchment characteristics to model seasonality of dissolved organic carbon fluxes in semi-arid mountainous headwaters

A - Papers appearing in refereed journals

Nosrati, K., Collins, A. L. and Fiener, P. 2020. Using catchment characteristics to model seasonality of dissolved organic carbon fluxes in semi-arid mountainous headwaters. Environmental Monitoring And Assessment. 192 (Article), p. 674. https://doi.org/10.1007/s10661-020-08626-2

Sediment sources, soil loss rates and sediment yields in a Karst plateau catchment in Southwest China

A - Papers appearing in refereed journals

Cheng, Q., Wang, S., Peng, T., Cao, L., Zhang, X., Buckerfield, S. J., Zhang, Y. and Collins, A. L. 2020. Sediment sources, soil loss rates and sediment yields in a Karst plateau catchment in Southwest China. Agriculture, Ecosystems & Environment. 304, p. 107114. https://doi.org/10.1016/j.agee.2020.107114

Source fingerprinting loess deposits in Central Asia using elemental geochemistry with Bayesian and GLUE models

A - Papers appearing in refereed journals

Li, Y., Gholami, H., Song, Y., Fathabadi, A., Malakooti, H. and Collins, A. L. 2020. Source fingerprinting loess deposits in Central Asia using elemental geochemistry with Bayesian and GLUE models. Catena. 194, p. 104808. https://doi.org/10.1016/j.catena.2020.104808

Sediment source fingerprinting: benchmarking recent outputs, remaining challenges and emerging themes

A - Papers appearing in refereed journals

Collins, A. L., Blackwell, M. S. A., Boeckx, P., Chivers, C-A., Emelko, M., Evrad, O., Foster, I., Gellis, A., Gholami, H., Granger, S. J., Harris, P., Horowitz, A. J., Laceby, J. P., Martinez-Carreras, N., Minella, J., Mol, L., Nosrati, K., Pulley, S., Silins, U., Da Silva, Y. J., Stone, M., Tiecher, T., Upadhayay, H. and Zhang, Y. 2020. Sediment source fingerprinting: benchmarking recent outputs, remaining challenges and emerging themes. Journal of Soils and Sediments. 20, pp. 4160-4193. https://doi.org/10.1007/s11368-020-02755-4

Sediment loss in response to scheduled pasture ploughing and reseeding: The importance of soil moisture content in controlling risk

A - Papers appearing in refereed journals

Pulley, S. and Collins, A. L. 2020. Sediment loss in response to scheduled pasture ploughing and reseeding: The importance of soil moisture content in controlling risk. Soil & Tillage Research. 204, p. 104746. https://doi.org/10.1016/j.still.2020.104746

A new integrated data mining model to map spatial variation in the susceptibility of land to act as a source of aeolian dust

A - Papers appearing in refereed journals

Gholami, H., Mohammadifar, A., Pourghasemi, H. R. and Collins, A. L. 2020. A new integrated data mining model to map spatial variation in the susceptibility of land to act as a source of aeolian dust. Environmental Science and Pollution Research. https://doi.org/10.1007/s11356-020-10168-6

Using the Budyko hypothesis for detecting and attributing changes in runoff to climate and vegetation change in the soft sandstone area of the middle Yellow River basin, China

A - Papers appearing in refereed journals

Li, H., Shi, C., Zhang, Y., Ning, T., Sun, P., Liu, X., Ma, X., Liu, W. and Collins, A. L. 2020. Using the Budyko hypothesis for detecting and attributing changes in runoff to climate and vegetation change in the soft sandstone area of the middle Yellow River basin, China . Science of the Total Environment. 703, p. 135588. https://doi.org/10.1016/j.scitotenv.2019.135588

Mapping the spatial sources of atmospheric dust using GLUE and Monte Carlo simulation

A - Papers appearing in refereed journals

Gholami, H., Rahimi, S., Fathabadi, A., Habibi, S. and Collins, A. L. 2020. Mapping the spatial sources of atmospheric dust using GLUE and Monte Carlo simulation. Science of the Total Environment. 723, p. 138090. https://doi.org/10.1016/j.scitotenv.2020.138090

A novel ensemble computational intelligence approach for the spatial prediction of land subsidence susceptibility

A - Papers appearing in refereed journals

Arabameri, A., Saha, S., Roy, J., Tiefenbacher, J. P., Cerda, A., Biggs, T., Pradhan, B., Ngo, P. T. T. and Collins, A. L. 2020. A novel ensemble computational intelligence approach for the spatial prediction of land subsidence susceptibility . Science of the Total Environment. 726, p. 138595. https://doi.org/10.1016/j.scitotenv.2020.138595

A comparison of machine learning models for the mapping of groundwater spring potential

A - Papers appearing in refereed journals

Al-Fugara, A., Pourghasemi, H. R., Al-Shabeeb, A. R., Habib, M., Al-Adamat, R., Al-Amoush, H. and Collins, A. L. 2020. A comparison of machine learning models for the mapping of groundwater spring potential. Environmental Earth Sciences. 79, p. 206. https://doi.org/10.1007/s12665-020-08944-1

Gully erosion spatial modelling - Role of machine learning algorithms in selection of the best controlling factors and modelling process

A - Papers appearing in refereed journals

Pourghasemi, H. R., Sadhasivam, N., Kariminejad, N. and Collins, A. L. 2020. Gully erosion spatial modelling - Role of machine learning algorithms in selection of the best controlling factors and modelling process. Geoscience Frontiers. https://doi.org/10.1016/j.gsf.2020.03.005

Storm dust source fingerprinting for different particle size fractions using colour and magnetic susceptibility and a Bayesian un-mixing model

A - Papers appearing in refereed journals

Nosrati, K., Akbari-Mahdiabad, M., Ayoubi, S., Degos, E., Koubansky, A., Coquatrix, Q., Pulley, S. and Collins, A. L. 2020. Storm dust source fingerprinting for different particle size fractions using colour and magnetic susceptibility and a Bayesian un-mixing model. Environmental Science and Pollution Research. 27, p. 31578–31594. https://doi.org/10.1007/s11356-020-09249-3

Catchment-wide variations and biogeochemical time lags in soil fatty acid carbon isotope composition for different land uses: Implications for sediment source classification

A - Papers appearing in refereed journals

Upadhayay, H. R., Griepentrog, M., Bode, S., Bajracharya, R. M., Cornelis, W., Collins, A. L. and Boeckx, P. 2020. Catchment-wide variations and biogeochemical time lags in soil fatty acid carbon isotope composition for different land uses: Implications for sediment source classification. Organic Geochemistry. 146, p. 104048. https://doi.org/10.1016/j.orggeochem.2020.104048

Experimental Investigation of Erosion Characteristics of Fine-Grained Cohesive Sediments

A - Papers appearing in refereed journals

Krishnappan, B. G., Stone, M., Granger, S. J., Upadhayay, H. R., Tang, Q., Zhang, Y. and Collins, A. L. 2020. Experimental Investigation of Erosion Characteristics of Fine-Grained Cohesive Sediments. Water. 12 (5), p. 1511. https://doi.org/10.3390/w12051511

The amount, but not the proportion, of N2 fixation and transfers to neighboring plants varies across grassland soils

A - Papers appearing in refereed journals

Zhang, Y., Carswell, A. M., Jiang, R., Cardenas, L. M., Chen, D. and Misselbrook, T. H. 2020. The amount, but not the proportion, of N2 fixation and transfers to neighboring plants varies across grassland soils. Soil Science and Plant Nutrition. 66 (3), pp. 481-488. https://doi.org/10.1080/00380768.2020.1742075

The representation of sediment source group tracer distributions in Monte Carlo uncertainty routines for fingerprinting: An analysis of accuracy and precision using data for four contrasting catchments

A - Papers appearing in refereed journals

Pulley, S., Collins, A. L. and Laceby, J. P. 2020. The representation of sediment source group tracer distributions in Monte Carlo uncertainty routines for fingerprinting: An analysis of accuracy and precision using data for four contrasting catchments. Hydrological Processes. 34 (11), pp. 2381-2400. https://doi.org/10.1002/hyp.13736

Dry cropland changes in China's Three Gorges Reservoir Region during the period 1990 to 2015

A - Papers appearing in refereed journals

Wang, M., Tian, F., He, X., Anjum, R., Bao, Y. and Collins, A. L. 2020. Dry cropland changes in China's Three Gorges Reservoir Region during the period 1990 to 2015. Journal of Mountain Science. 17, pp. 516-527. https://doi.org/10.1007/s11629-019-5598-1

Sensitivity of source apportionment predicted by a Bayesian tracer mixing model to the inclusion of a sediment connectivity index as an informative prior: Illustration using the Kharka catchment (Nepal)

A - Papers appearing in refereed journals

Upadhayay, H. R., Lamichhane, S., Bajracharya, R. M., Cornelis, W., Collins, A. L. and Boeckx, P. 2020. Sensitivity of source apportionment predicted by a Bayesian tracer mixing model to the inclusion of a sediment connectivity index as an informative prior: Illustration using the Kharka catchment (Nepal). Science of the Total Environment. 713, p. 136703. https://doi.org/10.1016/j.scitotenv.2020.136703

Optimizing farmyard manure and cattle slurry applications for intensively managed grasslands based on UK-DNDC model simulations

A - Papers appearing in refereed journals

Shah, S. H. H., Li, Y., Wang, J. and Collins, A. L. 2020. Optimizing farmyard manure and cattle slurry applications for intensively managed grasslands based on UK-DNDC model simulations. Science of the Total Environment. 714, p. 136672. https://doi.org/10.1016/j.scitotenv.2020.136672

Spatial mapping of the provenance of storm dust: Application of data mining and ensemble modelling

A - Papers appearing in refereed journals

Gholami, G., Mohamadifar, A. and Collins, A. L. 2020. Spatial mapping of the provenance of storm dust: Application of data mining and ensemble modelling. Atmospheric Research. 233 (104716). https://doi.org/10.1016/j.atmosres.2019.104716

The impact of metal-rich sediments derived from mining on freshwater stream life

B - Book chapters etc edited externally

Jones, I. J., Murphy, J. F., Collins, A. L., Spencer, K. L., Rainbow, P. S., Arnold, A., Pretty, J. L., Moorhouse A. M. L., Aguilera, V., Edwards, P., Parsonage, F., Potter, H. and Whitehouse, P. 2020. The impact of metal-rich sediments derived from mining on freshwater stream life. in: De Voogt, P. (ed.) Reviews of Environmental Contamination and Toxicology Volume 248. Reviews of Environmental Contamination and Toxicology (Continuation of Residue Reviews) Springer. pp. 111-189

Long-term in-situ monitoring and modelling of water quality

B - Book chapters etc edited externally

Zhang, Y., Collins, A. L. and Murdoch, N. 2019. Long-term in-situ monitoring and modelling of water quality. in: Mellander, P-E., Leach, S. and Burgess, E. (ed.) Achieving quality water in diverse and productive agricultural landscapes under a changing climate Ireland Teagasc. pp. 23 - 23

Fingerprinting the sources of water-mobilized sediment threatening agricultural and water resource sustainability: Progress, challenges and prospects in China

A - Papers appearing in refereed journals

Tang, Q., Fu, B., Wen, A., Zhang, X., He, X. and Collins, A. L. 2019. Fingerprinting the sources of water-mobilized sediment threatening agricultural and water resource sustainability: Progress, challenges and prospects in China. Science China - Earth Sciences. 62, pp. 2017-2030. https://doi.org/10.1007/s11430-018-9349-0

A soil quality index for evaluation of degradation under land use and soil erosion categories in a small mountainous catchment, Iran

A - Papers appearing in refereed journals

Nosrati, K. and Collins, A. L. 2019. A soil quality index for evaluation of degradation under land use and soil erosion categories in a small mountainous catchment, Iran. Journal of Mountain Science. 16 (11), pp. 2577-2590. https://doi.org/10.1007/s11629-019-5567-8

Thorium content in soil, water and sediment samples and fluvial sediment-associated transport in a catchment system with a semi-arid interface, Brazil

A - Papers appearing in refereed journals

Nascimento, R. C., da Silva, Yuri J. A. B., do Nascimento, C. W. A., da Silva, Ygor J. A. B., da Silva, R. J. A. B. and Collins, A. L. 2019. Thorium content in soil, water and sediment samples and fluvial sediment-associated transport in a catchment system with a semi-arid interface, Brazil. Environmental Science and Pollution Research. pp. 1-9. https://doi.org/10.1007/s11356-019-06499-8

Field-based determination of controls on runoff and fine sediment generation from lowland grazing livestock fields

A - Papers appearing in refereed journals

Pulley, S. and Collins, A. L. 2019. Field-based determination of controls on runoff and fine sediment generation from lowland grazing livestock fields. Journal of Environmental Management. 249 (1 November), p. 109365. https://doi.org/10.1016/j.jenvman.2019.109365

Fingerprinting sub-basin spatial sediment sources in a large Iranian catchment under dry-land cultivation and rangeland farming: combining geochemical tracers and weathering indices

A - Papers appearing in refereed journals

Raigani, Z. M., Nosrati, K. and Collins, A. L. 2019. Fingerprinting sub-basin spatial sediment sources in a large Iranian catchment under dry-land cultivation and rangeland farming: combining geochemical tracers and weathering indices. Journal of Hydrology: Regional Studies. 24, p. 100613. https://doi.org/10.1016/j.ejrh.2019.100613

A palaeoenvironmental study of particle size‐specific connectivity—New insights and implications from the West Sussex Rother Catchment, United Kingdom

A - Papers appearing in refereed journals

Foster, I. D. L., Biddulph, M., Boardman, J., Copeland-Phillips, R., Evans, J., Pulley, S., Zhang, Y. and Collins, A. L. 2019. A palaeoenvironmental study of particle size‐specific connectivity—New insights and implications from the West Sussex Rother Catchment, United Kingdom. River Research and Applications. 35 (8), pp. 1192-1202. https://doi.org/10.1002/rra.3477

Fingerprinting sub-basin spatial suspended sediment sources by combining geochemical tracers and weathering indices

A - Papers appearing in refereed journals

Nosrati, K., Fathi, Z. and Collins, A. L. 2019. Fingerprinting sub-basin spatial suspended sediment sources by combining geochemical tracers and weathering indices. Environmental Science and Pollution Research. 26 (27), p. 28401–28414. https://doi.org/10.1007/s11356-019-06024-x

Twenty-three unsolved problems in hydrology (UPH) – a community perspective

A - Papers appearing in refereed journals

Bloschl, G., Bierkens, M., Chambel, A., Cudennec, C., Destouni, G., Fiori, A., Kirchner, J. W., McDonnell, J. J., Sivapalan, M., Stumpp, C., Toth, E., Volpi, E., Carr, G., Lupton, C., Salinas, J., Szeles, B., Viglione, A., Aksoy, H., Allen, S. T., Amin, A., Andreassian, V., Arheimer, B., Aryal, S. K., Baker, V., Bardsley, E., Barendrecht, M. H., Bartosova, A., Batelaan, O., Berghuijs, W. R., Beven, K., Blume. T., Bogaard, T., Borges de Amorim, P., Bottcher, M. E., Boulet, G., Breinl, K., Brilly, M., Brocca, L., Buytaert, W., Castellarin, A., Castelletti, A., Chen, X., Chen ,Y., Chen , Y., Chifflard, P., Claps, P., Clark, M. P., Collins, A. L., Croke, B., Dathe, A., David, P. C., De Barros, F. P. J., De Rooij, G., Di Baldassarre, G., Driscoll, J. M., Duethmann, D., Dwivedi, R., Eris, E., Farmer, W. H., Feiccabrino, J., Ferguson, G., Ferrari, E., Ferrais, S., Fersch, B., Finger, D., Foglia, L., Fowler, K., Gartsman, B., Gascoin, S., Gaume, E., Gelfan, A., Geris, J., Gharari, S., Gleeson, T., Glendell, M., Gonzalez Bevacqua, A., Gonzalez-Dugo, M. P., Grimaldi, S., Gupta, A. B., Guse, B., Han, D., Hannah, D., Harpold, A., Haun, S., Heal, K., Helfricht, K., Herrnegger, M., Hipsey, M., Hlavacikova, H., Hohmann, C., Holko, L., Hopkinson, C., Hrachowitz, M., Illangasekare, T. H., Inam, A., Innocente, C., Istanbulluoglu, E., Jarihani, B., Kalantari, Z., Kalvans, A., Khanal, S., Khatami, S., Kiesel, J., Kirby, M., Knoben, W., Kochanek, K., Kohnova, S., Kolechkina, A., Krause, S., Kreamer, D., Kreibich, H., Kunstmann, H., Lange, H., Liberato, M. L. R., Lindquist, E., Link, T., Liu, J., Loucks, D. P., Luce, C., Mahe, G., Makarieva, O., Malard, J., Mashtayeva, S., Maskey, S., Mas-Pla, J., Mavrova-Guirguinova, M., Mazzoleni, M., Mernild, S., Misstear, B. D., Montanari, A., Muller-Thomy, H., Nabizadeh, A., Nardi, F., Neale, C., Nesterova, N., Nurtaev, B., Odongo, V. O., Panda, S., Pande, S., Pang, Z., Papacharalampous, G., Perrin, C., Pfister, L., Pimentel, R., Polo, M. J., Post, D., Prieto Sierra, C., Ramos, M-H., Renner, M., Reynolds, J. E., Ridolfi, E., Rigon, R., Riva, M., Robertson, D. E., Rosso, R., Roy, T., Sa, J. H. M., Salvadori, G., Sandells, M., Schaefli, B., Schumann, A., Scolobig, A., Seibert, J., Servat, E., Shafieri, M., Sharma, A., Sidibe, M., Sidle, R. C., Skaugen, T., Smith, H., Spiessel, S. M., Stein, L., Steinsland, I., Strasser, U., Su, B., Szolgay, J., Tarboton, D., Tauro, F., Thirel, G., Tian, F., Tong, R., Tussupova, K., Tryalsi, H., Uijlenhoet, R., Van Beek, R., Van der Ent, R. J., Van der Ploeg, M., Van Loon, A. F., Van Meerveld, I., Van Nooijen, R., Van Oel, P. R., Vidal, J-P., Von Freyberg, J., Vorogushyn, S., Wachniew, P., Wade, A. J., Ward, P., Westerberg, I. K., White, C., Wood, E. F., Woods, R., Xu, Z., Yilmaz, K. K. and Zhang, Y. 2019. Twenty-three unsolved problems in hydrology (UPH) – a community perspective. Hydrological Sciences Journal. 64 (10), pp. 1141-1158. https://doi.org/10.1080/02626667.2019.1620507

A Generic Approach for Live prediction of the risk of agricultural field runoff and delivery to watercourses: linking parsimonious soil-water-connectivity models with live weather data APIs in decision tools

A - Papers appearing in refereed journals

Comber, A., Collins, A. L., Haro-Monteagudo, D., Hess, T., Zhang, Y., Smith, A. and Turner, A. 2019. A Generic Approach for Live prediction of the risk of agricultural field runoff and delivery to watercourses: linking parsimonious soil-water-connectivity models with live weather data APIs in decision tools. Frontiers in Sustainable Food Systems. 3, p. Article 42. https://doi.org/10.3389/fsufs.2019.00042

Monte Carlo fingerprinting of the terrestrial sources of different particle size fractions of coastal sediment deposits using geochemical tracers: some lessons for the user community

A - Papers appearing in refereed journals

Gholami, H., TakhtiNajad, E. J., Collins, A. L. and Fathabadi, A. 2019. Monte Carlo fingerprinting of the terrestrial sources of different particle size fractions of coastal sediment deposits using geochemical tracers: some lessons for the user community. Environmental Science and Pollution Research. 26 (13), pp. 13560-13579. https://doi.org/10.1007/s11356-019-04857-0

Fingerprinting the contribution of quarrying to fine‐grained bed sediment in a mountainous catchment, Iran

A - Papers appearing in refereed journals

Nosrati, K. and Collins, A. L. 2019. Fingerprinting the contribution of quarrying to fine‐grained bed sediment in a mountainous catchment, Iran. River Research and Applications. 35, pp. 290-300. https://doi.org/10.1002/rra.3408

Decision support framework to identify lakes that are likely to meet water quality targets if external inputs of phosphorus from agriculture are reduced

A - Papers appearing in refereed journals

May, L., Taylor, P., Spears, B., Pitt, J-A., Collins, A. L., Corkley, I., Anthony, S., Skirvin, D., Lee, D. and Pamela, S. Naden 2019. Decision support framework to identify lakes that are likely to meet water quality targets if external inputs of phosphorus from agriculture are reduced. Limnetica. 38 (1), pp. 489-501. https://doi.org/10.23818/limn.38.28

The sources and dynamics of fine-grained sediment degrading the Freshwater Pearl Mussel (Margaritifera margaritifera) beds of the River Torridge, Devon, UK

A - Papers appearing in refereed journals

Pulley, S., Goubet, A., Mosser, I., Browning, S. and Collins, A. L. 2019. The sources and dynamics of fine-grained sediment degrading the Freshwater Pearl Mussel (Margaritifera margaritifera) beds of the River Torridge, Devon, UK. Science of the Total Environment. 657 (March 20), pp. 420-434. https://doi.org/10.1016/j.scitotenv.2018.11.401

Investigating the importance of recreational roads as a sediment source in a mountainous catchment using a fingerprinting procedure with different multivariate statistical techniques and a Bayesian un-mixing model

A - Papers appearing in refereed journals

Nosrati, K. and Collins, A. L. 2019. Investigating the importance of recreational roads as a sediment source in a mountainous catchment using a fingerprinting procedure with different multivariate statistical techniques and a Bayesian un-mixing model. Journal of Hydrology. 569 (February), pp. 506-518. https://doi.org/10.1016/j.jhydrol.2018.12.019

Field scale temporal and spatial variability of δ13C, δ15N, TC and TN soil properties : Implications for sediment source tracing

A - Papers appearing in refereed journals

Collins, A. L., Burak, E., Harris, P., Pulley, S., Cardenas, L. M. and Tang, Q. 2019. Field scale temporal and spatial variability of δ13C, δ15N, TC and TN soil properties : Implications for sediment source tracing. Geoderma. 333 (1 January), pp. 108-122. https://doi.org/10.1016/j.geoderma.2018.07.019

Determining the sources of nutrient flux to water in headwater catchments: Examining the speciation balance to inform the targeting of mitigation measures

A - Papers appearing in refereed journals

Lloyd, C. E. M., Johnes, P. J., Freer, J. E., Carswell, A. M., Jones, J. I., Stirling, M. W., Hodgkinson, R. A., Richmond, C. and Collins, A. L. 2019. Determining the sources of nutrient flux to water in headwater catchments: Examining the speciation balance to inform the targeting of mitigation measures. Science of the Total Environment. 648, pp. 1179-1200. https://doi.org/10.1016/j.scitotenv.2018.08.190

Bed and suspended sediment-associated rare earth element concentrations and fluxes in a polluted Brazilian river system

A - Papers appearing in refereed journals

da Silva, Y., Nascimento, C., da Silva, Y., Amorim, F., Singh, V. and Collins, A. L. 2018. Bed and suspended sediment-associated rare earth element concentrations and fluxes in a polluted Brazilian river system . Environmental Science and Pollution Research. 25 (34), pp. 34426-34437. https://doi.org/10.1007/s11356-018-3357-4

Identification and functional analysis of two P450 enzymes of Gossypium hirsutum involved in DMNT and TMTT biosynthesis

A - Papers appearing in refereed journals

Liu, D., Huang, X., Jing, W., An, X., Zhang, Q., Zhang, H., Zhou, J-J., Zhang, Y. and Guo, Y. 2018. Identification and functional analysis of two P450 enzymes of Gossypium hirsutum involved in DMNT and TMTT biosynthesis. Plant Biotechnology Journal. 16 (2), pp. 581-590. https://doi.org/10.1111/pbi.12797

Subsurface sources contribute substantially to fine‐grained suspended sediment transported in a tropical West African watershed in Burkina Faso

A - Papers appearing in refereed journals

Rode, M., Op de Hipt, F., Collins, A. L., Zhang, Y., Theuring, P., Schkade, U-K. and Diekkruger, B. 2018. Subsurface sources contribute substantially to fine‐grained suspended sediment transported in a tropical West African watershed in Burkina Faso. Land Degradation & Development. 29 (11), pp. 4092-4105. https://doi.org/10.1002/ldr.3165

Tracing sediment sources in a mountainous forest catchment under road construction in northern Iran: comparison of Bayesian and frequentist approaches

A - Papers appearing in refereed journals

Nosrati, K., Haddadchi, A., Collins, A. L., Jalali, S. and Reza Zare, M. 2018. Tracing sediment sources in a mountainous forest catchment under road construction in northern Iran: comparison of Bayesian and frequentist approaches. Environmental Science and Pollution Research. 25, pp. 30979-30999. https://doi.org/10.1007/s11356-018-3097-5

A method for uncertainty constraint of catchment discharge and phosphorus load estimates

A - Papers appearing in refereed journals

Holloway, M. J., Beven K. J., Benskin, C. Mc. W. H., Collins, A. L., Evans, R., Fallon, P. D., Forber, K. J., Hiscock, K. M., Kahana R., Macleod, C. J. A., Ockenden, M. C., Villamizar, M., Wearing, C., Withers, P. J. A., Zhou, J. G., Barber, N. J. and Haygarth, P. M. 2018. A method for uncertainty constraint of catchment discharge and phosphorus load estimates. Hydrological Processes. 32 (17), pp. 2779-2787. https://doi.org/10.1002/hyp.13217

Small Water Bodies in Great Britain and Ireland: Ecosystem function, human-generated degradation, and options for restorative action

A - Papers appearing in refereed journals

Riley, W. D., Potter, E. C. E., Collins, A. L., Biggs, J., Jarvie, H. P., Jones, J. I., Kelly-Quinn, M., Ormerod, S. J., Sear, D. A., Wilby, R. L., Broadmeadow, S., Brown, C. D., Chanin, P., Copp, G. H., Cowx, I. G., Grogan, A., Hornby, D. D., Huggett, D., Kelly, M. G., Naura, M., Newman, J. R. and Siriwardena, G. M. 2018. Small Water Bodies in Great Britain and Ireland: Ecosystem function, human-generated degradation, and options for restorative action. Science of the Total Environment. 645, pp. 1598-1616. https://doi.org/10.1016/j.scitotenv.2018.07.243

Sedimentary chronology reinterpreted from Changshou Lake of the Three Gorges Reservoir Area reveals natural and anthropogenic control on sediment production

A - Papers appearing in refereed journals

Anjum, R., Tang, Q., Collins, A. L., Gao, J., Long, Y., Zhang, X., He, X., Zhonglin, S., Wen, A. and Wei, J. 2018. Sedimentary chronology reinterpreted from Changshou Lake of the Three Gorges Reservoir Area reveals natural and anthropogenic control on sediment production. Environmental Science and Pollution Research. 24, pp. 17620-17633. https://doi.org/10.1007/s11356-018-1916-3

An analysis of potential controls on long-term 137Cs accumulation in the sediments of UK lakes

A - Papers appearing in refereed journals

Pulley, S., Foster, I. D. L., Collins, A. L., Zhang, Y. and Evans, Jennine 2018. An analysis of potential controls on long-term 137Cs accumulation in the sediments of UK lakes. Journal Of Paleolimnology. 60, pp. 1-30. https://doi.org/10.1007/s10933-017-0016-6

Tracing catchment fine sediment sources using the new SIFT (SedIment Fingerprinting Tool) open source software

A - Papers appearing in refereed journals

Pulley, S. and Collins, A. L. 2018. Tracing catchment fine sediment sources using the new SIFT (SedIment Fingerprinting Tool) open source software. Science of the Total Environment. 635, p. 838–858. https://doi.org/10.1016/j.scitotenv.2018.04.126

Particle size differentiation explains flow regulation controls on sediment sorting in the water-level fluctuation zone of the Three Gorges Reservoir, China

A - Papers appearing in refereed journals

Tang, Q., Collins, A. L., Wen, A., He, X., Bao, Y., Yan, D., Long, Y. and Zhang, Y. 2018. Particle size differentiation explains flow regulation controls on sediment sorting in the water-level fluctuation zone of the Three Gorges Reservoir, China. Science of the Total Environment. 633, pp. 1114-1125. https://doi.org/10.1016/j.scitotenv.2018.03.258

The Importance of Sustained Grassland and Environmental Research: A Case Study From North Wyke Research Station, UK, 1982–2017

B - Book chapters etc edited externally

Blackwell, M. S. A., Jarvis, S. C., Wilkins, R. J., Beaumont, D. A., Cardenas, L. M., Chadwick, D. R., Collins, A. L., Dungait, J. A. J., Gibb, M. J., Hopkins, A., Lee, M. R. F., Misselbrook, T. H., Murray, P. J. and Tallowin, J. R. B. 2018. The Importance of Sustained Grassland and Environmental Research: A Case Study From North Wyke Research Station, UK, 1982–2017. in: Sparks, D. L. (ed.) Advances in Agronomy. Volume 149 Elsevier. pp. 161-235

The environmental costs and benefits of high-yield farming

A - Papers appearing in refereed journals

Balmford, A., Amano, T., Bartlett, H., Chadwick, D., Collins, A. L., Edwards, D., Field, R., Garnsworthy, P., Green, R., Smith, P., Waters, H., Whitmore, A. P., Broom, D. M., Chara, J., Finch, T., Garnett, E., Gathorne-Hardy, A., Hernandez-Medrano, J., Herrero, M., Hua, F., Latawiec, A., Misselbrook, T. H., Phalan, B., Simmons I. B., Takahashi, T., Vause, J., Ermgassen, E. Z. and Eisner, R. 2018. The environmental costs and benefits of high-yield farming. Nature Sustainability. 1, pp. 477-285. https://doi.org/10.1038/s41893-018-0138-5

Developing a sustainable strategy to conserve reservoir marginal landscapes

A - Papers appearing in refereed journals

Tang, Q., Fu, B., Collins, A. L., Wen, A., He, X. and Bao, Y. 2018. Developing a sustainable strategy to conserve reservoir marginal landscapes. National Science Review. 5 (1), pp. 10-14. https://doi.org/10.1093/nsr/nwx102

Roles of instrumented farm-scale trials in trade-off assessments of pasture-based ruminant production systems

A - Papers appearing in refereed journals

Takahashi, T., Harris, P., Blackwell, M. S. A., Cardenas, L. M., Collins, A. L., Dungait, J. A. J., Hawkins, J. M. B., Misselbrook, T. H., McAuliffe, G. A., McFadzean, J. N., Murray, P. J., Orr, R. J., Rivero, M. J., Wu, L. and Lee, M. R. F. 2018. Roles of instrumented farm-scale trials in trade-off assessments of pasture-based ruminant production systems. Animal. 12 (8), pp. 1766-1776. https://doi.org/10.1017/S1751731118000502

The challenges of modelling phosphorus in a headwater catchment: Applying a "limits of acceptability" uncertaintly framework to a water quality model

A - Papers appearing in refereed journals

Hollaway, M. J., Beven, K. J., Benskin, C. McW. H., Collins, A. L., Evans, R., Falloon, P. D., Forber, K. J., Hiscock, K. M., Kahana, R., Macleod, C. J. A., Ockenden, M. C., Villamizar, M. L., Wearing, C., Withers, P. J. A., Zhou, J. G., Barber, N. J. and Haygarth, P. M. 2018. The challenges of modelling phosphorus in a headwater catchment: Applying a "limits of acceptability" uncertaintly framework to a water quality model. Journal of Hydrology. 558, pp. 607-624. https://doi.org/10.1016/j.jhydrol.2018.01.063

Assessing the potential impacts of a revised set of on-farm nutrient and sediment "basic" control measures for reducing agricultural diffuse pollution across England

A - Papers appearing in refereed journals

Collins, A. L., Newell Price, J. P., Zhang, Y., Gooday, R., Naden, P. S. and Skirvin, D. 2018. Assessing the potential impacts of a revised set of on-farm nutrient and sediment "basic" control measures for reducing agricultural diffuse pollution across England. Science of the Total Environment. 621, pp. 1499-1511. https://doi.org/10.1016/j.scitotenv.2017.10.078

The stable oxygen isotope ratio of resin extractable phosphate derived from fresh cattle faeces

A - Papers appearing in refereed journals

Granger, S. J., Yang, Y., Pfahler, V., Hodgson, C., Smith, A. C., Le Cocq, K., Collins, A. L., Blackwell, M. S. A. and Howden, N. K. J. 2018. The stable oxygen isotope ratio of resin extractable phosphate derived from fresh cattle faeces. Rapid Communications in Mass Spectrometry. 32 (9), pp. 703-710. https://doi.org/10.1002/rcm.8092

Fingerprinting sub-basin spatial sediment sources using different multivariate statistical techniques and the Modified MixSIR model

A - Papers appearing in refereed journals

Collins, A. L., Nosrati, K. and Madankan, M. 2018. Fingerprinting sub-basin spatial sediment sources using different multivariate statistical techniques and the Modified MixSIR model. Catena. 164 (May), pp. 32-43. https://doi.org/10.1016/j.catena.2018.01.003

Colour as reliable tracer to identify the sources of historically deposited flood bench sediment in the Transkei, South Africa: A comparison with mineral magnetic tracers before and after hydrogen peroxide pre-treatment

A - Papers appearing in refereed journals

Pulley, S., Van der Waal, B., Collins, A. L. and Rowntree, K. 2018. Colour as reliable tracer to identify the sources of historically deposited flood bench sediment in the Transkei, South Africa: A comparison with mineral magnetic tracers before and after hydrogen peroxide pre-treatment. Catena. 160, pp. 242-251. https://doi.org/10.1016/j.catena.2017.09.018

An exploration of individual, social and material factors influencing water pollution mitigation behaviours within the farming community

A - Papers appearing in refereed journals

Inman, A., Michael, M., Wheeler, R., Vrain, E., Lovett, A., Collins, A. L., Jones, I., Johnes, P. and Cleasby, W. 2018. An exploration of individual, social and material factors influencing water pollution mitigation behaviours within the farming community. Land Use Policy. 70, pp. 16-26. https://doi.org/10.1016/j.landusepol.2017.09.042

Variability in the mineral magnetic properties of soils and sediments within a single field in the Cape Fold mountains, South Africa : Implications for sediment sourcing tracing

A - Papers appearing in refereed journals

Collins, A. L., Pulley, S. and Van der Waal, B. 2018. Variability in the mineral magnetic properties of soils and sediments within a single field in the Cape Fold mountains, South Africa : Implications for sediment sourcing tracing. Catena. 163, pp. 172-183. https://doi.org/10.1016/j.catena.2017.12.019

TPS46, a Rice Terpene Synthase Conferring Natural Resistance to Bird Cherry-Oat Aphid, Rhopalosiphum padi (Linnaeus)

A - Papers appearing in refereed journals

Sun, Y., Huang, X., Ning, Y., Jing, W., Bruce, T. J. A., Qi, F., Xu, Q., Wu, K., Zhang, Y. and Guo, Y. 2017. TPS46, a Rice Terpene Synthase Conferring Natural Resistance to Bird Cherry-Oat Aphid, Rhopalosiphum padi (Linnaeus). Frontiers in Plant Science. 8 (110). https://doi.org/10.3389/fpls.2017.00110

Higher yields and lower methane emissions with new rice cultivars

A - Papers appearing in refereed journals

Jiang, Y., Van Groenigen, K. J., Huang, S., Hungate, B. A., Van Kessel, C., Hu, S., Zhang, J., Wu, L., Yan, X., Wang, L., Chen, J., Hang, X., Zhang, Y., Horwath, W. R., Ye, R., Linquist, B. A., Song, Z., Zheng, C., Deng, A. and Zhang, W. 2017. Higher yields and lower methane emissions with new rice cultivars. Global Change Biology. 23 (11), pp. 4728-4738. https://doi.org/10.1111/gcb.13737

Determining the Effect of Drying Time on Phosphorus Solubilization from Three Agricultural Soils under Climate Change Scenarios

A - Papers appearing in refereed journals

Forber, K. J., Ockenden, M. C., Wearing, C., Hollaway, M. J., Falloon, P. D., Kahana, R., Villamizar, M. L., Zhou, J. G., Withers, P. J. A., Beven, K. J., Collins, A. L., Evans, R., Hiscock, K. M., Macleod, C. J. A. and Haygarth, P. M. 2017. Determining the Effect of Drying Time on Phosphorus Solubilization from Three Agricultural Soils under Climate Change Scenarios. Journal of Environmental Quality. 46 (5), pp. 1131-1136. https://doi.org/10.2134/jeq2017.04.0144

A comparison of conventional and 137Cs-based estimates of soil erosion rates on arable and grassland across lowland England and Wales

A - Papers appearing in refereed journals

Evans, R., Collins, A. L., Zhang, Y., Foster, I. D. L., Boardman, J., Sint, H., Lee, M. R. F. and Griffith, B. A. 2017. A comparison of conventional and 137Cs-based estimates of soil erosion rates on arable and grassland across lowland England and Wales. Earth-Science Reviews. 173 (October), pp. 49-64. https://doi.org/10.1016/j.earscirev.2017.08.005

Major agricultural changes required to mitigate phosphorus losses under climate change

A - Papers appearing in refereed journals

Ockenden, M. C., Hollaway, M. J., Beven, K. J., Collins, A. L., Evans, R., Falloon, P. D., Forber, K. J., Hiscock, K. M., Kahana, R., Macleod, C. J. A., Tych, W., Villamizar, M. L., Wearing, C., Withers, P. J. A., Zhou, J. G., Barker, P. A., Burke, S., Freer, J. E., Johnes, P. J., Snell, M. A., Surridge, B. W. J. and Haygarth, P. M. 2017. Major agricultural changes required to mitigate phosphorus losses under climate change. Nature Communications. 8 (1), p. 161. https://doi.org/10.1038/s41467-017-00232-0

The potential benefits of on-farm mitigation scenarios for reducing multiple pollutant loadings in prioritised agri-environment areas across England

A - Papers appearing in refereed journals

Zhang, Y., Collins, A. L., Jones, J. I., Johnes, P. J., Inman, A. and Freer, J. E. 2017. The potential benefits of on-farm mitigation scenarios for reducing multiple pollutant loadings in prioritised agri-environment areas across England. Environmental Science & Policy. 73 (July), pp. 100-114. https://doi.org/10.1016/j.envsci.2017.04.004

Reducing soil phosphorus fertility brings potential long-term environmental gains: A UK analysis

A - Papers appearing in refereed journals

Withers, P. J. A., Hodgkinson, R. A., Rollett, A., Dyer, C., Dils, R., Collins, A. L., Bilsborrow, P. E., Bailey, G. and Sylvester-Bradley, R. 2017. Reducing soil phosphorus fertility brings potential long-term environmental gains: A UK analysis. Environmental Research Letters. 12 (6). https://doi.org/10.1088/1748-9326/aa69fc

Sediment transfer at different spatial and temporal scales in the Sichuan Hilly Basin, China: Synthesizing data from multiple approaches and preliminary interpretation in the context of climatic and anthropogenic drivers

A - Papers appearing in refereed journals

Golosov, V., Collins, A. L., Tang, Q., Zhang, X., Zhou, P., He, X. and Wen, A. 2017. Sediment transfer at different spatial and temporal scales in the Sichuan Hilly Basin, China: Synthesizing data from multiple approaches and preliminary interpretation in the context of climatic and anthropogenic drivers. Science of the Total Environment. 598 (15 November), pp. 319-329. https://doi.org/10.1016/j.scitotenv.2017.04.133

The impact of catchment source group classification on the accuracy of sediment fingerprinting outputs

A - Papers appearing in refereed journals

Pulley, S., Foster, I. and Collins, A. L. 2017. The impact of catchment source group classification on the accuracy of sediment fingerprinting outputs. Journal of Environmental Management. 194, pp. 16-26. https://doi.org/10.1016/j.jenvman.2016.04.048

Analysis of fundamental physical factors influencing channel bank erosion: results for contrasting catchments in England and Wales

A - Papers appearing in refereed journals

James, V. J. J., Nicholas, A. P., Collins, A. L. and Quine, T. A. 2017. Analysis of fundamental physical factors influencing channel bank erosion: results for contrasting catchments in England and Wales. Environmental Earth Sciences. 76, p. 307. https://doi.org/10.1007/s12665-017-6593-x

Sediment source fingerprinting as an aid to catchment management: A review of the current state of knowledge and a methodological decision-tree for end-users

A - Papers appearing in refereed journals

Collins, A. L., Pulley, S., Foster, I. D. L., Gellis, A., Porto, P. and Horowitz, A. J. 2017. Sediment source fingerprinting as an aid to catchment management: A review of the current state of knowledge and a methodological decision-tree for end-users. Journal of Environmental Management. 194 (1 June), pp. 86-108. https://doi.org/10.1016/j.jenvman.2016.09.075

Sediment source fingerprinting for informing catchment management: Methodological approaches, problems and uncertainty

A - Papers appearing in refereed journals

Collins, A. L., Foster, I. D. L., Gellis, A. C., Porto, P. and Horowitz, A. J. 2017. Sediment source fingerprinting for informing catchment management: Methodological approaches, problems and uncertainty. Journal of Environmental Management. 194 (1 June), pp. 1-3. https://doi.org/10.1016/j.jenvman.2017.03.026

Use of sediment source fingerprinting to assess the role of subsurface erosion in the supply of fine sediment in a degraded catchment in the Eastern Cape, South Africa

A - Papers appearing in refereed journals

Manjoro, M., Rowntree, K. M., Kakembo, V., Foster, I. D. L. and Collins, A. L. 2017. Use of sediment source fingerprinting to assess the role of subsurface erosion in the supply of fine sediment in a degraded catchment in the Eastern Cape, South Africa. Journal of Environmental Management. 194 (1 June), pp. 27-41. https://doi.org/10.1016/j.jenvman.2016.07.019

The potential for gamma-emitting radionuclides to contribute to an understanding of erosion processes in South Africa

A - Papers appearing in refereed journals

Foster, I. D. L., Boardman, J., Collins, A. L., Copeland-Phillips, R., Kuhn, N. J., Mighall, T. M., Pulley, S. and Rowntree, K. M. 2017. The potential for gamma-emitting radionuclides to contribute to an understanding of erosion processes in South Africa. Proceedings of the International Association of Hydrological Sciences - IAHS. 375, pp. 29-34. https://doi.org/10.5194/piahs-375-29-2017

Projected impacts of increased uptake of source control mitigation measures on agricultural diffuse pollution emissions to water and air

A - Papers appearing in refereed journals

Zhang, Y., Collins, A. L., Johnes, P. J. and Jones, J. I. 2017. Projected impacts of increased uptake of source control mitigation measures on agricultural diffuse pollution emissions to water and air. Land Use Policy. 62 (March), pp. 185-201. https://doi.org/10.1016/j.landusepol.2016.12.017

The oxygen isotopic composition of phosphate in river water and its potential sources in the Upper River Taw catchment, UK

A - Papers appearing in refereed journals

Granger, S. J., Heaton, T. H. E., Pfahler, V., Blackwell, M. S. A., Yuan, H-M. and Collins, A. L. 2017. The oxygen isotopic composition of phosphate in river water and its potential sources in the Upper River Taw catchment, UK. Science of the Total Environment. 574 (1 January), pp. 680-690. https://doi.org/10.1016/j.scitotenv.2016.09.007

Hydrological controls on DOC : nitrate resource stoichiometry in a lowland, agricultural catchment, southern UK

A - Papers appearing in refereed journals

Heppell, C. M., Binley, A., Trimmer, M., Darch, T., Jones, A., Malone, E., Collins, A. L., Johnes, P. J., Freer, J. E. and Lloyd, C. E. M. 2017. Hydrological controls on DOC : nitrate resource stoichiometry in a lowland, agricultural catchment, southern UK. Hydrology And Earth System Sciences. 21 (9), pp. 4785-4802. https://doi.org/10.5194/hess-21-4785-2017

Prediction of storm transfers and annual loads with data-based mechanistic models using high-frequency data

A - Papers appearing in refereed journals

Collins, A. L., Ockenden, M. C., Tych, W., Beven, K. J., Evans, R., Fallon, P. D., Forber, K. J., Hiscock, K. M., Holloway, M. J., Kahana, R., Macleod, C. J. A., Villamizar, M. L., Wearing, C., Withers, P. A. J., Zhou, J. G., Benskin, C. McW. H., Buke, S., Cooper, R. J., Freer, J. E. and Haygarth, P. M. 2017. Prediction of storm transfers and annual loads with data-based mechanistic models using high-frequency data. Hydrology And Earth System Sciences. 21, pp. 6425-6444. https://doi.org/10.5194/hess-21-6425-2017

Can macroinvertebrate biological traits indicate fine-grained sediment conditions in streams?

A - Papers appearing in refereed journals

Collins, A. L., Murphy, J. F., Jones, J. I., Duerdoth, C. P., Pretty, J. L., Naden, P. S. and Sear, D. A. 2017. Can macroinvertebrate biological traits indicate fine-grained sediment conditions in streams? River Research and Applications. 33 (10), pp. 1606-1617. https://doi.org/10.1002/rra.3194

The magnitude and significance of sediment oxygen demand in gravel spawning beds for the incubation of salmonid embryos

A - Papers appearing in refereed journals

Collins, A. L., Sear, D. A., Pattison, I., Smallman, D. J., Jones, J. I. and Naden, P. S. 2017. The magnitude and significance of sediment oxygen demand in gravel spawning beds for the incubation of salmonid embryos. River Research and Applications. 33 (10), pp. 1642-1654. https://doi.org/10.1002/rra.3212

Are source groups always appropriate when sediment fingerprinting? The direct comparison of source and sediment samples as a methodological step

A - Papers appearing in refereed journals

Collins, A. L., Pulley, S., Van der Waal, B., Foster, I. D. L. and Rowntree, K. 2017. Are source groups always appropriate when sediment fingerprinting? The direct comparison of source and sediment samples as a methodological step. River Research and Applications. 33 (10), pp. 1553-1563. https://doi.org/10.1002/rra.3192

The scale problem in tackling diffuse water pollution from agriculture: Insights from the Avon Demonstration Test

A - Papers appearing in refereed journals

Biddulph, M., Collins, A. L., Foster, I. D. L. and Holmes, N. 2017. The scale problem in tackling diffuse water pollution from agriculture: Insights from the Avon Demonstration Test. River Research and Applications. 33 (10), pp. 1527-1538. https://doi.org/10.1002/rra.3222

Fingerprinting source contributions to bed sediment‐associated organic matter in the headwater subcatchments of the River Itchen SAC, Hampshire, UK

A - Papers appearing in refereed journals

Collins, A. L., Zhang, Y., McMillan, S., Dixon, E. R., Cancer-Berroya, E., Poiret, C. and Stringellow, A. 2017. Fingerprinting source contributions to bed sediment‐associated organic matter in the headwater subcatchments of the River Itchen SAC, Hampshire, UK. River Research and Applications. 33 (10), pp. 1515-1526. https://doi.org/10.1002/rra.3172

Sediment‐associated organic matter sources and sediment oxygen demand in a Special Area of Conservation (SAC): A case study of the River Axe, UK

A - Papers appearing in refereed journals

Collins, A. L., Zhang, Y., McMillan, S., Dixon, E. R., Stringfellow, A., Bateman, S. and Sear, D. A. 2017. Sediment‐associated organic matter sources and sediment oxygen demand in a Special Area of Conservation (SAC): A case study of the River Axe, UK. River Research and Applications. 33 (10), pp. 1539-1552. https://doi.org/10.1002/rra.3175

The fine sediment conundrum; quantifying, mitigating and managing the isues

A - Papers appearing in refereed journals

Collins, A. L., Mathers, K. L., England, J., Brierley, B. and Rice, S. P. 2017. The fine sediment conundrum; quantifying, mitigating and managing the isues. River Research and Applications. 33, pp. 1509-1514. https://doi.org/10.1002/rra.3228

Changing climate and nutrient transfers: Evidence from high temporal resolution concentration-flow dynamics in headwater catchments

A - Papers appearing in refereed journals

Ockenden, M. C., Deasy, C. E., Benskin, C. M. H., Beven, K. J., Burke, S., Collins, A. L., Evans, R., Falloon, P. D., Forber, K. J., Hiscock, K. M., Hollaway, M. J., Kahana, R., Macleod, C. J. A., Reaney, S. M., Snell, M. A., Villamizar, M. L., Wearing, C., Withers, P. J. A., Zhou, J. G. and Haygarth, P. M. 2016. Changing climate and nutrient transfers: Evidence from high temporal resolution concentration-flow dynamics in headwater catchments. Science of the Total Environment. 548, pp. 325-339. https://doi.org/10.1016/j.scitotenv.2015.12.086

The contribution of farm-scale experiments to the understanding of soil processes and implications for ecosystem services [Guest Editors' Introduction]

A - Papers appearing in refereed journals

Cardenas, L. M., Collins, A. L., Dungait, J. A. J., Hawkins, J. M. B., Chabbi, A. and Hawes, C. 2016. The contribution of farm-scale experiments to the understanding of soil processes and implications for ecosystem services [Guest Editors' Introduction]. European Journal of Soil Science. 67 (4), pp. 359-359. https://doi.org/10.1111/ejss.12360

Flow regulation manipulates contemporary seasonal sedimentary dynamics in the reservoir fluctuation zone of the Three Gorges Reservoir, China

A - Papers appearing in refereed journals

Tang, Q., Bao, Y. H., He, X. B., Fu, B. J., Collins, A. L. and Zhang, X. B. 2016. Flow regulation manipulates contemporary seasonal sedimentary dynamics in the reservoir fluctuation zone of the Three Gorges Reservoir, China. Science of the Total Environment. 548, pp. 410-420. https://doi.org/10.1016/j.scitotenv.2015.12.158

Discharge and nutrient uncertainty: implications for nutrient flux estimation in small streams

A - Papers appearing in refereed journals

Lloyd, C. E. M., Freer, J. E., Johnes, P. J., Coxon, G. and Collins, A. L. 2016. Discharge and nutrient uncertainty: implications for nutrient flux estimation in small streams. Hydrological Processes. 30 (1), pp. 135-152. https://doi.org/10.1002/hyp.10574

Optimizing rice plant photosynthate allocation reduces N2O emissions from paddy fields

A - Papers appearing in refereed journals

Jiang, Y., Huang, X. M., Zhang, X., Zhang, X. Y., Zhang, Y., Zheng, C. Y., Deng, A. X., Zhang, J., Wu, L. H., Hu, S. J. and Zhang, W. J. 2016. Optimizing rice plant photosynthate allocation reduces N2O emissions from paddy fields. Scientific Reports. 6. https://doi.org/10.1038/srep29333

Fine sediment transport and management

B - Book chapters etc edited externally

Walling, D. E. and Collins, A. L. 2016. Fine sediment transport and management. in: Gilvear, D., Greenwood, Malcolm T., Thoms, Martin C. and Wood, Paul J. (ed.) River science : research and management for the 21st Century (Chapter 3) Chichester, Sussex Wiley-Blackwell. pp. 37-60

Use of farm survey returns from the Demonstration Test Catchments to update modelled predictions of sediment and total phosphorus loadings from subsurface drains across England and Wales

A - Papers appearing in refereed journals

Zhang, Y., Collins, A. L. and Hodgkinson, R. 2016. Use of farm survey returns from the Demonstration Test Catchments to update modelled predictions of sediment and total phosphorus loadings from subsurface drains across England and Wales. Soil Use and Management. 32, pp. 127-137. https://doi.org/10.1111/sum.12249

Understanding the controls on deposited fine sediment in the streams of agricultural catchments

A - Papers appearing in refereed journals

Naden, P. S., Murphy, J. F., Old, G. H., Newman, J., Scarlett, P., Harman, M., Duerdoth, C. P., Hawczak, A., Pretty, J. L., Arnold, A., Laize, C., Hornby, D. D., Collins, A. L., Sear, D. A. and Jones, J. I. 2016. Understanding the controls on deposited fine sediment in the streams of agricultural catchments. Science of the Total Environment. 547, pp. 366-381. https://doi.org/10.1016/j.scitotenv.2015.12.079

Tackling agricultural diffuse pollution: What might uptake of farmer-preferred measures deliver for emissions to water and air?

A - Papers appearing in refereed journals

Collins, A. L., Zhang, Y., Winter, M., Inman, A., Jones, J. I., Johnes, P. J., Cleasby, W., Vrain, E., Lovett, A. and Noble, L. 2016. Tackling agricultural diffuse pollution: What might uptake of farmer-preferred measures deliver for emissions to water and air? Science of the Total Environment. 547 (15 March), pp. 269-281. https://doi.org/10.1016/j.scitotenv.2015.12.130

Sediment-phosphorus dynamics can shift aquatic ecology and cause downstream legacy effects after wildfire in large river systems

A - Papers appearing in refereed journals

Emelko, M. B., Stone, M., Silins, U., Allin, D., Collins, A. L., Williams, C. H. S., Martens, A. M. and Bladon, K. D. 2016. Sediment-phosphorus dynamics can shift aquatic ecology and cause downstream legacy effects after wildfire in large river systems. Global Change Biology. 22 (3), pp. 1168-1184. https://doi.org/10.1111/gcb.13073

Mapping the combined risk of agricultural fine sediment input and accumulation for riverine ecosystems across England and Wales

A - Papers appearing in refereed journals

Naura, M., Hornby, D. D., Collins, A. L., Sear, D. A., Hill, C., Jones, J. I. and Naden, P. S. 2016. Mapping the combined risk of agricultural fine sediment input and accumulation for riverine ecosystems across England and Wales. Ecological Indicators. 70, pp. 209-221. https://doi.org/10.1016/j.ecolind.2016.03.055

Lattice Boltzmann method for the fractional advection-diffusion equation

A - Papers appearing in refereed journals

Zhou, J. G., Haygarth, P. M., Withers, P. J. A., Macleod, C. J. A., Falloon, P. D., Beven, K. J., Ockenden, M. C., Forber, K. J., Hollaway, M. J., Evans, R., Collins, A. L., Hiscock, K. M., Wearing, C., Kahana, R. and Velez, M. L. V. 2016. Lattice Boltzmann method for the fractional advection-diffusion equation. Physical Review E. 93 (4). https://doi.org/10.1103/PhysRevE.93.043310

Interpreting sedimentation dynamics at Longxi catchment in the Three Gorges Area, China, using Cs-137 activity, particle size and rainfall erosivity

A - Papers appearing in refereed journals

Gao, J. Z., Long, Y., Zhang, X. B., Collins, A. L., He, X. B., Zhang, Y-Q. and Shi, Z. L. 2016. Interpreting sedimentation dynamics at Longxi catchment in the Three Gorges Area, China, using Cs-137 activity, particle size and rainfall erosivity. Journal of Mountain Science. 13 (5), pp. 857-869. https://doi.org/10.1007/s11629-015-3637-0

Exceedance of modern 'background' fine-grained sediment delivery to rivers due to current agricultural land use and uptake of water pollution mitigation options across England and Wales

A - Papers appearing in refereed journals

Collins, A. L. and Zhang, Y. 2016. Exceedance of modern 'background' fine-grained sediment delivery to rivers due to current agricultural land use and uptake of water pollution mitigation options across England and Wales. Environmental Science & Policy. 61, pp. 61-73. https://doi.org/10.1016/j.envsci.2016.03.017

The North Wyke Farm Platform: effect of temperate grassland farming systems on soil moisture contents, runoff and associated water quality dynamics

A - Papers appearing in refereed journals

Orr, R. J., Murray, P. J., Eyles, C. J., Blackwell, M. S. A., Cardenas, L. M., Collins, A. L., Dungait, J. A. J., Goulding, K. W. T., Griffith, B. A., Gurr, S. J., Harris, P., Hawkins, J. M. B., Misselbrook, T. H., Rawlings, C. J., Shepherd, A., Sint, H. M., Takahashi, T., Tozer, K. N., Whitmore, A. P., Wu, L. and Lee, M. R. F. 2016. The North Wyke Farm Platform: effect of temperate grassland farming systems on soil moisture contents, runoff and associated water quality dynamics. European Journal of Soil Science. 67 (4), pp. 374-385. https://doi.org/10.1111/ejss.12350

The changing trend in nitrate concentrations in major aquifers due to historical nitrate loading from agricultural land across England and Wales from 1925 to 2150

A - Papers appearing in refereed journals

Wang, L., Stuart, M. E., Lewis, M. A., Ward, R. S., Skirvin, D., Naden, P. S., Collins, A. L. and Ascott, M. J. 2016. The changing trend in nitrate concentrations in major aquifers due to historical nitrate loading from agricultural land across England and Wales from 1925 to 2150. Science of the Total Environment. 542, pp. 694-705. https://doi.org/10.1016/j.scitotenv.2015.10.127

Does fine sediment source as well as quantity affect salmonid embryo mortality and development?

A - Papers appearing in refereed journals

Sear, D. A., Jones, J. I., Collins, A. L., Hulin, A., Burke, N., Bateman, S., Pattison, I. and Naden, P. S. 2016. Does fine sediment source as well as quantity affect salmonid embryo mortality and development? Science of the Total Environment. 541, pp. 957-968. https://doi.org/10.1016/j.scitotenv.2015.09.155

A review of the policies and implementation of practices to decrease water quality impairment by phosphorus in New Zealand, the UK and the US

A - Papers appearing in refereed journals

Mcdowell, R. W., Dils, R. M., Collins, A. L., Flahive, K. A., Sharpley, A. N. and Quinn, J. 2016. A review of the policies and implementation of practices to decrease water quality impairment by phosphorus in New Zealand, the UK and the US. Nutrient Cycling in Agroecosystems. 104 (3), pp. 289-305. https://doi.org/10.1007/s10705-015-9727-0

Using hysteresis analysis of high-resolution water quality monitoring data, including uncertainty, to infer controls on nutrient and sediment transfer in catchments

A - Papers appearing in refereed journals

Lloyd, C. E. M., Freer, J. E., Johnes, P. J. and Collins, A. L. 2016. Using hysteresis analysis of high-resolution water quality monitoring data, including uncertainty, to infer controls on nutrient and sediment transfer in catchments. Science of the Total Environment. 543, pp. 388-404. https://doi.org/10.1016/j.scitotenv.2015.11.028

Technical note: testing an improved index for analysing storm discharge-nutrient hysteresis

A - Papers appearing in refereed journals

Lloyd, C. E. M., Freer, J. E., Johnes, P. J. and Collins, A. L. 2016. Technical note: testing an improved index for analysing storm discharge-nutrient hysteresis. Hydrology And Earth System Sciences. 20 (2), pp. 625-632. https://doi.org/10.5194/hess-20-625-2016

Extent, frequency and rate of water erosion of arable land in Britain - benefits and challenges for modelling

A - Papers appearing in refereed journals

Evans, R., Collins, A. L., Foster, I. D. L., Rickson, R. J., Anthony, S. G., Brewer, T., Deeks, L., Newell-Price, J. P., Truckell, I. G. and Zhang, Y. 2016. Extent, frequency and rate of water erosion of arable land in Britain - benefits and challenges for modelling. Soil Use and Management. 32 (S1), pp. 149-161. https://doi.org/10.1111/sum.12210

The North Wyke Farm Platform, a UK national capability for research into sustainability of temperate agricultural grassland management: progress and developments

C2 - Non-edited contributions to conferences

Harris, P., Dungait, J. A. J., Griffith, B. A., Shepherd, A., Sint, H. M., Blackwell, M. S. A., Cardenas, L. M., Collins, A. L., Goulding, K. W. T., Lee, M. R. F. and Orr, R. J. 2015. The North Wyke Farm Platform, a UK national capability for research into sustainability of temperate agricultural grassland management: progress and developments. EGU.

Capturing the spatial variability of N2O emissions on grazed grasslands

C2 - Non-edited contributions to conferences

Cardenas, L. M., Dunn, R. M., Shepherd, A., Misselbrook, T. H., Orr, R. J., Griffith, B. A., Velazquez, A., Burak, E., Chen, K., Harris, P., Repullo, M. and Collins, A. L. 2015. Capturing the spatial variability of N2O emissions on grazed grasslands. Abstracts ASA/CSSA/SSSA International Annual Meeting Synergy in Science: Partnering for Solutions, Minneapolis, 15-18 November 2015 .

Reduction in mRNA and protein expression of a nicotinic acetylcholine receptor alpha 8 subunit is associated with resistance to imidacloprid in the brown planthopper, Nilaparvata lugens

A - Papers appearing in refereed journals

Zhang, Y., Wang, X., Yang, B., Hu, Y., Huang, L., Bass, C. G. and Liu, Z. 2015. Reduction in mRNA and protein expression of a nicotinic acetylcholine receptor alpha 8 subunit is associated with resistance to imidacloprid in the brown planthopper, Nilaparvata lugens. Journal of Neurochemistry. 135 (4), pp. 686-694. https://doi.org/10.1111/jnc.13281

Source identification of fine-grained suspended sediment in the Kharaa River basin, northern Mongolia

A - Papers appearing in refereed journals

Theuring, P., Collins, A. L. and Rode, M. 2015. Source identification of fine-grained suspended sediment in the Kharaa River basin, northern Mongolia. Science of the Total Environment. 526, pp. 77-87. https://doi.org/10.1016/j.scitotenv.2015.03.134

Development of a biotic index using stream macroinvertebrates to assess stress from deposited fine sediment

A - Papers appearing in refereed journals

Murphy, J. F., Jones, J. I., Pretty, J. L., Duerdoth, C. P., Hawczak, A., Arnold, A., Blackburn, J. H., Naden, P. S., Old, G., Sear, D. A., Hornby, D., Clarke, R. T. and Collins, A. L. 2015. Development of a biotic index using stream macroinvertebrates to assess stress from deposited fine sediment. Freshwater Biology. 60 (10), pp. 2019-2036. https://doi.org/10.1111/fwb.12627

Assessment of a rapid method for quantitative reach-scale estimates of deposited fine sediment in rivers

A - Papers appearing in refereed journals

Duerdoth, C. P., Arnold, A., Murphy, J. F., Naden, P. S., Scarlett, P., Collins, A. L., Sear, D. A. and Jones, J. I. 2015. Assessment of a rapid method for quantitative reach-scale estimates of deposited fine sediment in rivers. Geomorphology. 230, pp. 37-50. https://doi.org/10.1016/j.geomorph.2014.11.003

Molecular characterization of two isoforms of a farnesyl pyrophosphate synthase gene in wheat and their roles in sesquiterpene synthesis and inducible defence against aphid infestation

A - Papers appearing in refereed journals

Zhang, Y., Li, Z-X., Yu, X-D., Fan, J., Pickett, J. A., Jones, H. D., Zhou, J-J., Birkett, M. A., Caulfield, J., Napier, J. A., Zhao, G-Y., Cheng, X-G., Shi, Y., Bruce, T. J. A. and Xia, L-Q. 2015. Molecular characterization of two isoforms of a farnesyl pyrophosphate synthase gene in wheat and their roles in sesquiterpene synthesis and inducible defence against aphid infestation. New Phytologist. 206 (3), pp. 1101-1115. https://doi.org/10.1111/nph.13302

A multi-model uncertainty assessment of phosphorus transport using high-frequency data from the River Eden catchment, Cumbria

C2 - Non-edited contributions to conferences

Hollaway, M., Haygarth, P. M., Benskin, C., Beven, K., Collins, A. L., Evans, R., Falloon, P., Hiscock, K., Kahana, R., Macleod, C., Ockenden, M., Ross, K., Wearing, C., Withers, P., Zhou, J. and Team, E. 2014. A multi-model uncertainty assessment of phosphorus transport using high-frequency data from the River Eden catchment, Cumbria. Abstracts Tereno International Conference: from Observation to Prediction in Terrestrial Systems, Bonn, 29 September-2 October 2014 . pp. O27

The North Wyke Farm Platform, a national capability for research into sustainability of temperate agricultural grassland management: data and modelling opportunities

C2 - Non-edited contributions to conferences

Harris, P., Griffith, B. A., Shepherd, A., Peukert, S., Hawkins, J. M. B., Elyes, C., Whitmore, A. P., Blackwell, M. S. A., Brazier, R. E., Cardenas, L. M., Wu, L., Dungait, J. A. J., Collins, A. L., Gurr, S. J., Murray, P. J., Goulding, K. W. T. and Orr, R. J. 2014. The North Wyke Farm Platform, a national capability for research into sustainability of temperate agricultural grassland management: data and modelling opportunities. Abstracts Tereno International Conference: from Observation to Prediction in Terrestrial Systems, Bonn, 29 September-2 October 2014 . pp. P2-07

Spatiotemporal changes in arbuscular mycorrhizal fungal communities under different nitrogen inputs over a 5-year period in intensive agricultural ecosystems on the North China Plain

A - Papers appearing in refereed journals

Liu, W., Jiang, S., Zhang, Y., Yue, S., Christie, P., Murray, P. J., Li, X. and Zhang, J. 2014. Spatiotemporal changes in arbuscular mycorrhizal fungal communities under different nitrogen inputs over a 5-year period in intensive agricultural ecosystems on the North China Plain. FEMS Microbiology Ecology. 90 (2), pp. 436-453. https://doi.org/10.1111/1574-6941.12405

Distributed and dynamic modelling of hydrology, phosphorus and ecology in the Hampshire Avon and Blashford Lakes: evaluating alternative strategies to meet WFD standards

A - Papers appearing in refereed journals

Whitehead, P. G., Jin, L., Crossman, J., Comber, S., Johnes, P. J., Daldorph, P., Flynn, N., Collins, A. L., Butterfield, D., Mistry, R., Bardon, R., Pope, L. and Willows, R. 2014. Distributed and dynamic modelling of hydrology, phosphorus and ecology in the Hampshire Avon and Blashford Lakes: evaluating alternative strategies to meet WFD standards. Science of the Total Environment. 481, pp. 157-166. https://doi.org/10.1016/j.scitotenv.2014.02.007

Modelling the cost-effectiveness of mitigation methods for multiple pollutants at farm scale

A - Papers appearing in refereed journals

Gooday, R. D., Anthony, S. G., Chadwick, D. R., Newell-Price, P., Harris, D., Duethmann, D., Fish, R., Collins, A. L. and Winter, M. 2014. Modelling the cost-effectiveness of mitigation methods for multiple pollutants at farm scale. Science of the Total Environment. 468-469, pp. 1198-1209. https://doi.org/10.1016/j.scitotenv.2013.04.078

Groundwater conceptual models: implications for evaluating diffuse pollution mitigation measures

A - Papers appearing in refereed journals

Allen, D. J., Darling, W. G., Davies, J., Newell, A. J., Gooddy, D. C. and Collins, A. L. 2014. Groundwater conceptual models: implications for evaluating diffuse pollution mitigation measures. Quarterly Journal Of Engineering Geology And Hydrogeology. 47, pp. 65-80. https://doi.org/10.1144/qjegh2013-043

Cross sector contributions to river pollution in England and Wales: updating waterbody scale information to support policy delivery for the Water Framework Directive

A - Papers appearing in refereed journals

Zhang, Y., Collins, A. L., Murdoch, N., Lee, D. and Naden, P. S. 2014. Cross sector contributions to river pollution in England and Wales: updating waterbody scale information to support policy delivery for the Water Framework Directive. Environmental Science & Policy. 42, pp. 16-32. https://doi.org/10.1016/j.envsci.2014.04.010

Identifying priorities for nutrient mitigation using river concentration-flow relationships: the Thames basin, UK

A - Papers appearing in refereed journals

Bowes, M. J., Jarvie, H. P., Naden, P. S., Old, G. H., Scarlett, P. M., Roberts, C., Armstrong, L. K., Harman, S. A., Wickham, H. D. and Collins, A. L. 2014. Identifying priorities for nutrient mitigation using river concentration-flow relationships: the Thames basin, UK. Journal of Hydrology. 517, pp. 1-12. https://doi.org/10.1016/j.jhydrol.2014.03.063

High-frequency monitoring of nitrogen and phosphorus response in three rural catchments to the end of the 2011-2012 drought in England

A - Papers appearing in refereed journals

Outram, F. N., Lloyd, C. E. M., Jonczyk, J., Benskin, C. Mcw. H., Grant, F., Perks, M. T., Deasy, C., Burke, S. P., Collins, A. L., Freer, J., Haygarth, P. M., Hiscock, K. M., Johnes, P. J. and Lovett, A. L. 2014. High-frequency monitoring of nitrogen and phosphorus response in three rural catchments to the end of the 2011-2012 drought in England. Hydrology And Earth System Sciences. 18, pp. 3429-3448. https://doi.org/10.5194/hess-18-3429-2014

Sources of sediment-bound organic matter infiltrating spawning gravels during the incubation and emergence life stages of salmonids

A - Papers appearing in refereed journals

Collins, A. L., Williams, L. J., Zhang, Y., Marius, M., Dungait, J. A. J., Smallman, D. J., Dixon, E. R., Stringfellow, A., Sear, D. A., Jones, J. I. and Naden, P. S. 2014. Sources of sediment-bound organic matter infiltrating spawning gravels during the incubation and emergence life stages of salmonids. Agriculture, Ecosystems & Environment. 196 (15 October), pp. 76-93. https://doi.org/10.1016/j.agee.2014.06.018

Developing demonstration test catchments as a platform for transdisciplinary land management research in England and Wales

A - Papers appearing in refereed journals

Mcgonigle, D. F., Burke, S. P., Collins, A. L., Gartner, R., Haft, M. R., Harris, R. C., Haygarth, P. M., Hedges, M. C., Hiscock, K. M. and Lovett, A. A. 2014. Developing demonstration test catchments as a platform for transdisciplinary land management research in England and Wales. Environmental Science: Processes and Impacts. 16, pp. 1618-1628. https://doi.org/10.1039/c3em00658a

Odorant binding characteristics of three recombinant odorant binding proteins in Microplitis mediator (Hymenoptera: Braconidae)

A - Papers appearing in refereed journals

Li, K., Wang, S., Zhang, K., Ren, L., Ali, A., Zhang, Y., Zhou, J-J. and Guo, Y. 2014. Odorant binding characteristics of three recombinant odorant binding proteins in Microplitis mediator (Hymenoptera: Braconidae). Journal of Chemical Ecology. 40, pp. 541-548. https://doi.org/10.1007/s10886-014-0458-5

The use of composite fingerprints to quantify sediment sources in a wildfire impacted landscape, Alberta, Canada

A - Papers appearing in refereed journals

Stone, M., Collins, A. L., Silins, U., Emelko, M. B. and Zhang, Y. 2014. The use of composite fingerprints to quantify sediment sources in a wildfire impacted landscape, Alberta, Canada. Science of the Total Environment. 473-474 (1 March), pp. 642-650. https://doi.org/10.1016/j.scitotenv.2013.12.052

Methods for detecting change in hydrochemical time series in response to targeted pollutant mitigation in river catchments

A - Papers appearing in refereed journals

Lloyd, C. E. M., Freer, J. E., Collins, A. L., Johnes, P. J. and Jones, J. I. 2014. Methods for detecting change in hydrochemical time series in response to targeted pollutant mitigation in river catchments. Journal of Hydrology. 514, pp. 297-312. https://doi.org/10.1016/j.jhydrol.2014.04.036

Mitigating diffuse pollution from agriculture: international approaches and experience. Editorial

A - Papers appearing in refereed journals

Collins, A. L., Stutter, M. and Kronvang, B. 2014. Mitigating diffuse pollution from agriculture: international approaches and experience. Editorial. Science of the Total Environment. 468-469, pp. 1173-1177. https://doi.org/10.1016/j.scitotenv.2013.11.001

Microbial biomass phosphorus contributions to phosphorus solubility in riparian vegetated buffer strip soils

A - Papers appearing in refereed journals

Roberts, W. M., Matthews, R. A., Blackwell, M. S. A., Peukert, S., Collins, A. L., Stutter, M. I. and Haygarth, P. M. 2013. Microbial biomass phosphorus contributions to phosphorus solubility in riparian vegetated buffer strip soils. Biology And Fertility Of Soils. 49, pp. 1237-1241. https://doi.org/10.1007/s00374-013-0802-x

New technologies reduce greenhouse gas emissions from nitrogenous fertilizer in China

A - Papers appearing in refereed journals

Zhang, W-F., Dou, Z-X., He, P., Ju, X-T., Powlson, D. S., Chadwick, D. R., Norse, D., Lu, Y-L., Zhang, Y., Wu, Liang, Chen, X-P., Cassman, K. G. and Zhang, F-S. 2013. New technologies reduce greenhouse gas emissions from nitrogenous fertilizer in China. Proceedings of the National Academy of Sciences. 110 (21), pp. 8375-8380. https://doi.org/10.1073/pnas.1210447110

Transcriptome profiling of the whitefly Bemisia tabaci reveals stage-specific gene expression signatures for thiamethoxam resistance

A - Papers appearing in refereed journals

Yang, N., Xie, W., Jones, C. M., Bass, C., Jiao, X., Yang, X., Liu, B., Li, R. and Zhang, Y. 2013. Transcriptome profiling of the whitefly Bemisia tabaci reveals stage-specific gene expression signatures for thiamethoxam resistance. Insect Molecular Biology. 22 (5), pp. 485-496. https://doi.org/10.1111/imb.12038

Identification and characterization of pheromone receptors and interplay between receptors and pheromone binding proteins in the diamondback moth, Plutella xyllostella

A - Papers appearing in refereed journals

Sun, M., Liu, Y., Walker, W. B., Liu, C., Lin, K., Gu, S., Zhang, Y., Zhou, J-J. and Wang, G. 2013. Identification and characterization of pheromone receptors and interplay between receptors and pheromone binding proteins in the diamondback moth, Plutella xyllostella. PLOS ONE. 8, p. e62098. https://doi.org/10.1371/journal.pone.0062098

Catchment source contributions to the sediment-bound organic matter degrading salmonid spawning gravels in a lowland river, southern England

A - Papers appearing in refereed journals

Collins, A. L., Williams, L. J., Zhang, Y., Marius, M., Dungait, J. A. J., Smallman, D. J., Dixon, E. R., Stringfellow, A., Sear, D. A., Jones, J. I. and Naden, P. S. 2013. Catchment source contributions to the sediment-bound organic matter degrading salmonid spawning gravels in a lowland river, southern England. Science of the Total Environment. 456-457 (1 July), pp. 181-195. https://doi.org/10.1016/j.scitotenv.2013.03.093

Contemporary fine‐grained bed sediment sources across the River Wensum Demonstration Test Catchment, UK

A - Papers appearing in refereed journals

Collins, A. L., Zhang, Y. S., Hickinbotham, R., Bailey, G., Darlington, S., Grenfell, S. E., Evans, R. and Blackwell, M. S. A. 2013. Contemporary fine‐grained bed sediment sources across the River Wensum Demonstration Test Catchment, UK. Hydrological Processes. 27 (6), pp. 857-884. https://doi.org/10.1002/hyp.9654

Enhanced nitrogen deposition over China

A - Papers appearing in refereed journals

Liu, X., Zhang, Y., Han, W., Tang, A., Shen, J., Cui, J., Vitousek, P., Erisman, J. W., Goulding, K. W. T., Christie, P., Fangmeier, A. and Zhang, F. 2013. Enhanced nitrogen deposition over China. Nature. 494, pp. 459-463. https://doi.org/10.1038/nature11917

A dual-targeted purple acid phosphatase in Arabidopsis thaliana moderates carbon metabolism and its overexpression leads to faster plant growth and higher seed yield

A - Papers appearing in refereed journals

Sun, F., Suen, P. K., Zhang, Y., Liang, C., Carrie, C., Whelan, J., Ward, J. L., Hawkins, N. D., Jiang, L. and Lim, B. L. 2012. A dual-targeted purple acid phosphatase in Arabidopsis thaliana moderates carbon metabolism and its overexpression leads to faster plant growth and higher seed yield. New Phytologist. 194 (1), pp. 206-219. https://doi.org/10.1111/j.1469-8137.2011.04026.x

(E) -beta-Farnesene synthase genes affect aphid (Myzus persicae) infestation in tobacco (Nicotiana tabacum)

A - Papers appearing in refereed journals

Yu, X., Jones, H. D., Ma, Y., Wang, G., Xu, Z., Zhang, B., Zhang, Y., Ren, G., Pickett, J. A. and Xia, L. 2012. (E) -beta-Farnesene synthase genes affect aphid (Myzus persicae) infestation in tobacco (Nicotiana tabacum). Functional and Integrative Genomics. 12, pp. 207-213. https://doi.org/10.1007/s10142-011-0244-1

Benzoxazinoid metabolites regulate innate immunity against aphids and fungi in maize

A - Papers appearing in refereed journals

Ahmad, S., Veyrat, N., Gordon-Weeks, R., Zhang, Y., Martin, J. L., Smart, L. E., Glauser, G., Erb, M., Flors, V., Frey, M. and Ton, J. 2011. Benzoxazinoid metabolites regulate innate immunity against aphids and fungi in maize. Plant Physiology. 157, pp. 317-327. https://doi.org/10.1104/pp.111.180224

Atmospheric ammonia and particulate ammonium from agricultural sources in the North China Plain

A - Papers appearing in refereed journals

Shen, J., Liu, X., Zhang, Y., Fangmeier, A., Goulding, K. W. T. and Zhang, F. 2011. Atmospheric ammonia and particulate ammonium from agricultural sources in the North China Plain. Atmospheric Environment. 45, pp. 5033-5041. https://doi.org/10.1016/j.atmosenv.2011.02.031

The role of the benzoxazinone pathway in aphid resistance in wheat (HGCA Project Report No. PR473)

D1 - Technical reports: non-confidential

Gordon-Weeks, R., Smart, L. E., Ahmad, S., Zhang, Y., Elek, H., Jing, H-C., Martin, J. L. and Pickett, J. A. 2010. The role of the benzoxazinone pathway in aphid resistance in wheat (HGCA Project Report No. PR473). Home Grown Cereals Authority (HGCA) Stoneleigh.

Up-regulation of biosynthetic processes associated with growth by trehalose 6-phosphate

A - Papers appearing in refereed journals

Paul, M. J., Jhurreea, D., Zhang, Y., Primavesi, L. F., Delatte, T., Schluepmann, H. and Wingler, A. 2010. Up-regulation of biosynthetic processes associated with growth by trehalose 6-phosphate. Plant Signaling and Behavior. 5 (4), pp. 386-392. https://doi.org/10.4161/psb.5.4.10792

Significant acidification in major Chinese croplands

A - Papers appearing in refereed journals

Guo, J. H., Liu, X. J., Zhang, Y., Shen, L. J., Han, W. X., Zhang, W-F., Christie, P., Goulding, K. W. T., Vitousek, P. M. and Zhang, F-S. 2010. Significant acidification in major Chinese croplands. Science - AAAS. 327 (5968), pp. 1008-1010. https://doi.org/10.1126/science.1182570

ABA response element binding proteins are convergence points for metabolic and stress signalling pathways involving SNF1-related protein kinases

C2 - Non-edited contributions to conferences

Parry, M. A. J., Hirano, E., Hey, S., Zhang, Y., Andralojc, P. J., Primavesi, L. F. and Halford, N. G. 2009. ABA response element binding proteins are convergence points for metabolic and stress signalling pathways involving SNF1-related protein kinases. Abstracts Plant Biology 2009, Honolulu, 18-22 July 2009 .

Inhibition of SNF1-related protein kinase1 activity and regulation of metabolic pathways by trehalose-6-phosphate

A - Papers appearing in refereed journals

Zhang, Y., Primavesi, L. F., Jhurreea, D., Andralojc, P. J., Mitchell, R. A. C., Powers, S. J., Schluepmann, H., Delatte, T., Wingler, A. and Paul, M. J. 2009. Inhibition of SNF1-related protein kinase1 activity and regulation of metabolic pathways by trehalose-6-phosphate. Plant Physiology. 149 (4), pp. 1860-1871. https://doi.org/10.1104/pp.108.133934

Arabidopsis sucrose non-fermenting-1-related protein kinase-1 and calcium-dependent protein kinase phosphorylate conserved target sites in ABA response element binding proteins

A - Papers appearing in refereed journals

Zhang, Y., Andralojc, P. J., Hey, S. J., Primavesi, L. F., Specht, M., Koehler, J., Parry, M. A. J. and Halford, N. G. 2008. Arabidopsis sucrose non-fermenting-1-related protein kinase-1 and calcium-dependent protein kinase phosphorylate conserved target sites in ABA response element binding proteins. Annals of Applied Biology - AAB. 153 (3), pp. 401-409. https://doi.org/10.1111/j.1744-7348.2008.00302.x

Integration of leaf metabolism and physiology by the trehalose pathway

C2 - Non-edited contributions to conferences

Paul, M. J., Jhurreea, D., Primavesi, L. F., Zhang, Y., Sivagnanam, T. and Wingler, A. 2008. Integration of leaf metabolism and physiology by the trehalose pathway. https://doi.org/10.1016/j.cbpa.2008.04.538

GCN2-dependent phosphorylation of eukaryotic translation initiation factor 2-alpha in Arabidopsis

A - Papers appearing in refereed journals

Zhang, Y., Wang, Y., Kanyuka, K., Parry, M. A. J., Powers, S. J. and Halford, N. G. 2008. GCN2-dependent phosphorylation of eukaryotic translation initiation factor 2-alpha in Arabidopsis. Journal of Experimental Botany. 59 (11), pp. 3131-3141. https://doi.org/10.1093/jxb/ern169

Trehalose 6-phosphate makes sugar sense

C2 - Non-edited contributions to conferences

Primavesi, L. F., Jhurreea, D., Zhang, Y., Andralojc, P. J., Wingler, A. and Paul, M. J. 2008. Trehalose 6-phosphate makes sugar sense. https://doi.org/10.1016/j.cbpa.2008.04.525

Trehalose metabolism and signaling

A - Papers appearing in refereed journals

Paul, M. J., Primavesi, L. F., Jhurreea, D. and Zhang, Y. 2008. Trehalose metabolism and signaling. Annual Review of Plant Biology. 59, pp. 417-441. https://doi.org/10.1146/annurev.arplant.59.032607.092945

Nitrogen inputs and isotopes in precipitation in the North China Plain

A - Papers appearing in refereed journals

Zhang, Y., Liu, X. J., Fangmeier, A., Goulding, K. W. T. and Zhang, F-S. 2008. Nitrogen inputs and isotopes in precipitation in the North China Plain. Atmospheric Environment. 42, pp. 1436-1448. https://doi.org/10.1016/j.atmosenv.2007.11.002

Evidence for organic N deposition and its anthropogenic sources in China

A - Papers appearing in refereed journals

Zhang, Y., Zheng, L., Liu, X., Jickells, T., Cape, J. N., Goulding, K. W. T., Fangmeier, A. and Zhang, F. 2008. Evidence for organic N deposition and its anthropogenic sources in China. Atmospheric Environment. 42, pp. 1035-1041. https://doi.org/10.1016/j.atmosenv.2007.12.015

The role of the hydroxamic acid pathway in aphid resistance in wheat

C2 - Non-edited contributions to conferences

Gordon-Weeks, R., Zhang, Y., Birkemeyer, C., Provis-Evans, C. and Pickett, J. A. 2007. The role of the hydroxamic acid pathway in aphid resistance in wheat. Abstracts 4th UK Small Grain Cereals Genetic and Genomics Workshop: From Genes to Traits, Cambridge, 14-16 March 2007 .

AtGCN2 is involved in response to limitation of amino acid biosynthesis in arabidopsis plants

C2 - Non-edited contributions to conferences

Zhang, Y., Paul, M. J., Parry, M. A. J. and Halford, N. G. 2006. AtGCN2 is involved in response to limitation of amino acid biosynthesis in arabidopsis plants. Abstracts 8th International Congress of Plant Molecular Biology, Adelaide, 20-25 August 2006 . pp. 217

The role of the protein kinase SnRK1 in regulating carbohydrate metabolism

C2 - Non-edited contributions to conferences

Halford, N. G., Hey, S., Muttucumaru, N., Zhang, Y., Primavesi, L. F., Jhurreea, D., Andralojc, P. J. and Paul, M. J. 2006. The role of the protein kinase SnRK1 in regulating carbohydrate metabolism. Abstracts 8th International Congress of Plant Molecular Biology, Adelaide, 20-25 August 2006 . pp. 96

Aphid alarm pheromone produced by transgenic plants affects aphid and parasitoid behavior

A - Papers appearing in refereed journals

Beale, M. H., Birkett, M. A., Bruce, T. J. A., Chamberlain, K., Field, L. M., Huttly, A. K., Martin, J. L., Parker, R., Phillips, A. L., Pickett, J. A., Prosser, I. M., Shewry, P. R., Smart, L. E., Wadhams, L. J., Woodcock, C. M. and Zhang, Y. 2006. Aphid alarm pheromone produced by transgenic plants affects aphid and parasitoid behavior. Proceedings of the National Academy of Sciences. 103, pp. 10509-10513. https://doi.org/10.1073/pnas.0603998103

Development of biotech crops in China

B - Book chapters etc edited externally

Xue, Q., Zhang, X. and Zhang, Y. 2006. Development of biotech crops in China. in: Halford, N. G. (ed.) Plant biotechnology: current and future uses of genetically modified crops John Wiley & Sons Chichester, West Sussex. pp. 53-67

Genetic modification of SnRK1 and impact on metabolism in Arabidopsis

C2 - Non-edited contributions to conferences

Jhurreea, D., Zhang, Y., Andralojc, P. J., Bennett, M., Halford, N. G. and Paul, M. J. 2004. Genetic modification of SnRK1 and impact on metabolism in Arabidopsis.

Highly conserved protein kinases involved in the regulation of carbon and amino acid metabolism

A - Papers appearing in refereed journals

Halford, N. G., Hey, S., Jhurreea, D., Laurie, S., Mckibbin, R. S., Zhang, Y. and Paul, M. J. 2004. Highly conserved protein kinases involved in the regulation of carbon and amino acid metabolism. Journal of Experimental Botany. 55 (1), pp. 35-42. https://doi.org/10.1093/jxb/erh019

Expression of the gamma-zein protein of maize in seeds of transgenic barley: effects on grain composition and properties

A - Papers appearing in refereed journals

Zhang, Y., Darlington, H., Jones, H. D., Halford, N. G., Napier, J. A., Davey, M. R., Lazzeri, P. A. and Shewry, P. R. 2003. Expression of the gamma-zein protein of maize in seeds of transgenic barley: effects on grain composition and properties. Theoretical and Applied Genetics. 106 (6), pp. 1139-1146. https://doi.org/10.1007/s00122-002-1162-3

Dissection and manipulation of metabolic signalling pathways

A - Papers appearing in refereed journals

Halford, N. G., Hey, S., Jhurreea, D., Laurie, S., Mckibbin, R. S., Zhang, Y. and Paul, M. J. 2003. Dissection and manipulation of metabolic signalling pathways. Annals of Applied Biology - AAB. 142 (1), pp. 25-31. https://doi.org/10.1111/j.1744-7348.2003.tb00225.x

Molecular cloning of an arabidopsis homologue of GCN2, a protein kinase involved in co-ordinated response to amino acid starvation

A - Papers appearing in refereed journals

Zhang, Y., Dickinson, J. R., Paul, M. J. and Halford, N. G. 2003. Molecular cloning of an arabidopsis homologue of GCN2, a protein kinase involved in co-ordinated response to amino acid starvation. Planta. 217, pp. 668-675. https://doi.org/10.1007/s00425-003-1025-4

Metabolic signalling and carbon partitioning: role of Snf1-related (SnRK1) protein kinase

A - Papers appearing in refereed journals

Halford, N. G., Hey, S., Jhurreea, D., Laurie, S., Mckibbin, R. S., Paul, M. J. and Zhang, Y. 2003. Metabolic signalling and carbon partitioning: role of Snf1-related (SnRK1) protein kinase. Journal of Experimental Botany. 54, pp. 467-475. https://doi.org/10.1093/jxb/erg038

Genetic manipulation of seed storage protein and carbohydrate metabolism in barley (Hordeum vulgare L.)

F - Theses

Zhang, Y. 2001. Genetic manipulation of seed storage protein and carbohydrate metabolism in barley (Hordeum vulgare L.). F - Theses

Expression of antisense SnRK1 protein kinase sequence causes abnormal pollen development and male sterility in transgenic barley

A - Papers appearing in refereed journals

Zhang, Y., Shewry, P. R., Jones, H. D., Barcelo, P., Lazzeri, P. A. and Halford, N. G. 2001. Expression of antisense SnRK1 protein kinase sequence causes abnormal pollen development and male sterility in transgenic barley. The Plant Journal. 28 (4), pp. 431-441. https://doi.org/10.1046/j.1365-313X.2001.01167.x

Antisense expression of a SnRK1 protein kinase sequence in transgenic barley (Hordeum vulgare L.): evidence of an important role for SnRK1 protein kinase in carbohydrate metabolism during pollen development

C1 - Edited contributions to conferences/learned societies

Zhang, Y., Barcelo, P., Shewry, P. R., Jones, H. D., Davey, M. R., Lazzeri, P. A. and Halford, N. G. 2000. Antisense expression of a SnRK1 protein kinase sequence in transgenic barley (Hordeum vulgare L.): evidence of an important role for SnRK1 protein kinase in carbohydrate metabolism during pollen development. Barley Genetics VIII: Proceedings 8th International Barley Genetics Symposium, Adelaide, October 2000 . pp. 134-136

Expression of gamma-zein, a maize storage protein gene, in barley seed

C1 - Edited contributions to conferences/learned societies

Zhang, Y., Darlington, H., Napier, J. A., Jones, H. D., Davey, M. R., Halford, N. G., Lazzeri, P. A. and Shewry, P. R. 2000. Expression of gamma-zein, a maize storage protein gene, in barley seed. Barley Genetics VIII,Proceedings 8th International Barley Genetics Symposium, Adelaide, October 2000 Vol. 3. pp. 131-133

Genetic manipulation of seed composition in barley

C2 - Non-edited contributions to conferences

Zhang, Y., Darlington, H., Napier, J. A., Jones, H. D., Davey, M. R., Shewry, P. R., Halford, N. G. and Lazzeri, P. A. 1999. Genetic manipulation of seed composition in barley. Abstracts 16th Long Ashton International Symposium on Biotechnology of Cereals: Tools, Targets and Triumphs, Long Ashton, 13-15 September 1999 .

Barley plants transformed with HAL1 gene

C2 - Non-edited contributions to conferences

Laurie, S. A., Zhang, Y., Brown, S., Leigh, R. A. and Lazzeri, P. A. 1997. Barley plants transformed with HAL1 gene. Abstracts SEB Plant Transport Group Workshop, Glasgow, 8-10 September 1997 . pp. S6