Rothamsted Research

Title	Rothamsted Research
Type	Institute

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Managing Acrylamide at the Agricultural Stage: Variety Selection, Crop Management, and the Prospects for Solving the Acrylamide Problem Through Plant Breeding and Biotechnology

B - Book chapters etc edited externally

Halford, N. G. 2018. Managing Acrylamide at the Agricultural Stage: Variety Selection, Crop Management, and the Prospects for Solving the Acrylamide Problem Through Plant Breeding and Biotechnology. in: Encyclopedia of Food Chemistry, Volume 1 Elsevier. pp. 559–568

Chinese cropping systems are a net source of greenhouse gases despite soil carbon sequestration

A - Papers appearing in refereed journals

Gao, B., Huang, T., Ju, X., Gu, B., Huang, W., Xu, L., Rees, R. M., Powlson, D. S., Smith, P. and Cui, S. 2018. Chinese cropping systems are a net source of greenhouse gases despite soil carbon sequestration. Global Change Biology. 24 (12), pp. 5590-5606. https://doi.org/10.1111/gcb.14425

Attractiveness of host banana leaf materials to the banana weevil, Cosmopolites sordidus in Ghana for development of field management strategies

A - Papers appearing in refereed journals

Abagale, S. A., Woodcock, C. M., Chamberlain, K., Ofaso-Acquaah, S., Van Emden, H., Birkett, M. A., Pickett, J. A. and Braimah, H. 2018. Attractiveness of host banana leaf materials to the banana weevil, Cosmopolites sordidus in Ghana for development of field management strategies . Pest Management Science. 75 (2), pp. 549-555. https://doi.org/10.1002/ps.5182

Geographically weighted elastic net logistic regression

A - Papers appearing in refereed journals

Comber, A. and Harris, P. 2018. Geographically weighted elastic net logistic regression. Journal of Geographical Systems. 20 (4), pp. 317-341. https://doi.org/10.1007/s10109-018-0280-7

shp2graph: tools to convert a spatial network into an igraph in R

A - Papers appearing in refereed journals

Lu, B., Sun, H., Harris, P., Xu, M. and Charlton, M 2018. shp2graph: tools to convert a spatial network into an igraph in R. ISPRS International Journal of Geo-Information. 7 (8), p. 293. https://doi.org/10.3390/ijgi7080293

Hyper-local geographically weighted regression: extending GWR through local model selection and local bandwidth optimization

A - Papers appearing in refereed journals

Comber, A., Wang, Y., Lu, Y., Zhang, X. and Harris, P. 2018. Hyper-local geographically weighted regression: extending GWR through local model selection and local bandwidth optimization. Journal of Spatial Information Science. 17, pp. 63-84. https://doi.org/10.5311/JOSIS.2018.17.422

Improvements to the calibration of a Geographically Weighted Regression with Parameter-Specific Distance Metrics and Bandwidths

A - Papers appearing in refereed journals

Lu, B, Wang, W, Ge, Y and Harris, P. 2018. Improvements to the calibration of a Geographically Weighted Regression with Parameter-Specific Distance Metrics and Bandwidths. Computers, Environment and Urban Systems. 71, pp. 41-57. https://doi.org/10.1016/j.compenvurbsys.2018.03.012

Water flow across the interface of contrasting materials: Pressure discontinuity and its implications

A - Papers appearing in refereed journals

Li, Z., Wang, D., Zhang, X. and Crawford, J. W. 2018. Water flow across the interface of contrasting materials: Pressure discontinuity and its implications . Journal of Hydrology. 566, pp. 435-440. https://doi.org/10.1016/j.jhydrol.2018.09.029

Valuing Improvements in Biodiversity Due to Controls on Atmospheric Nitrogen Pollution

A - Papers appearing in refereed journals

Jones, L., Milne, A. E., Hall, J., Mills, G., Provins, A. and Christie, M. 2018. Valuing Improvements in Biodiversity Due to Controls on Atmospheric Nitrogen Pollution. Ecological Economics. 152, pp. 358-366. https://doi.org/10.1016/j.ecolecon.2018.06.010

Impact of Phenotypic Correction Method and Missing Phenotypic Data on Genomic Prediction of Maize Hybrids

A - Papers appearing in refereed journals

Galli, G, Lyra, D. H., Alves, F. C, Granato, I. S. C., Bandeira-Sousa, M. and Fritsche-Neto, R 2018. Impact of Phenotypic Correction Method and Missing Phenotypic Data on Genomic Prediction of Maize Hybrids. Crop Science. 58 (4), pp. 1481-1491. https://doi.org/10.2135/cropsci2017.07.0459

Perspective on wheat yield and quality with reduced nitrogen supply

A - Papers appearing in refereed journals

Zorb, C., Ludewig, U. and Hawkesford, M. J. 2018. Perspective on wheat yield and quality with reduced nitrogen supply. Trends in Plant Science. 23 (11), pp. 1029-1037. https://doi.org/10.1016/j.tplants.2018.08.012

Image conditions for polar and cylindrical coordinate separation-of-variables acoustic multiple scattering models with perfectly reflecting flat boundaries

A - Papers appearing in refereed journals

Shin, H.-C. 2018. Image conditions for polar and cylindrical coordinate separation-of-variables acoustic multiple scattering models with perfectly reflecting flat boundaries. Quarterly Journal Of Mechanics And Applied Mathematics. 71 (3), pp. 273 - 296. https://doi.org/10.1093/qjmam/hby005

Characterizing animal anatomy and internal composition for electromagnetic modelling in radar entomology

A - Papers appearing in refereed journals

Mirkovic, D., Stepanian, P. M., Wainwright, C. E., Reynolds, D. R. and Menz, M. H. M. 2018. Characterizing animal anatomy and internal composition for electromagnetic modelling in radar entomology. Remote Sensing in Ecology and Conservation. https://doi.org/10.1002/rse2.94

Assessing the benefits and wider costs of different N fertilisers for grassland agriculture

A - Papers appearing in refereed journals

Carswell, A. M., Shaw, R., Hunt, J., Sanchez-Rodriguez, A. R., Saunders, K. S., Cotton, J., Hill, P. W., Chadwick, D. R., Jones, D. L. and Misselbrook, T. H. 2018. Assessing the benefits and wider costs of different N fertilisers for grassland agriculture . Archives of Agronomy and Soil Science. 65 (5), pp. 625 - 639. https://doi.org/10.1080/03650340.2018.1519251

Vegetation and edaphic factors influence rapid establishment of distinct fungal communities on former coal-spoil sites

A - Papers appearing in refereed journals

Detheridge, A. P., Comont, D., Callaghan, T. M., Bussell, J., Brand, G., Gwynn-Jones, D., Scullion, J. and Griffith, G. W. 2018. Vegetation and edaphic factors influence rapid establishment of distinct fungal communities on former coal-spoil sites. Fungal Ecology. 33 (June), pp. 92-103. https://doi.org/10.1016/j.funeco.2018.02.002

Olfactory-cued navigation in shearwaters: linking movement patterns to mechanisms

A - Papers appearing in refereed journals

Abolaffio, M., Reynolds, A. M., Cecere, J. G., Paiva, V. H. and Focardi, S. 2018. Olfactory-cued navigation in shearwaters: linking movement patterns to mechanisms. Scientific Reports. 8 (11590). https://doi.org/10.1038/s41598-018-29919-0

Root development impacts on the distribution of phosphatase activity: Improvements in quantification using soil zymography

A - Papers appearing in refereed journals

Giles, C. D., Dupuy, L., Boitt, G., Brown, L. K., Condron, L. M., Darch, T., Blackwell, M. S. A., Menezes-Blackburn, D., Shand, C. A., Stutter, M. I., Lumsdon, D. G., Wendler, R., Cooper, P., Wearing, C., Zhang, H., Haygarth, P. M. and George, T. S. 2018. Root development impacts on the distribution of phosphatase activity: Improvements in quantification using soil zymography. Soil Biology and Biochemistry. 116, pp. 158-166. https://doi.org/10.1016/j.soilbio.2017.08.011

Phosphorus acquisition by citrate- and phytase-exuding Nicotiana tabacum plant mixtures depends on soil phosphorus availability and root intermingling

A - Papers appearing in refereed journals

Giles, C. D., Richardson, A. E., Cade-Menun, B. J., Mezali, M. M., Brown, L. K., Menezes-Blackburn, D., Darch, T., Blackwell, M. S. A., Shand, C. A., Stutter, M. I., Wendler, R., Cooper, P., Lumsdon, D. G., Wearing, C., Zhang, H., Haygarth, P. M. and George, T. S. 2018. Phosphorus acquisition by citrate- and phytase-exuding Nicotiana tabacum plant mixtures depends on soil phosphorus availability and root intermingling. Physiologia Plantarum. 163, pp. 356-371. https://doi.org/10.1111/ppl.12718

Risk of Silver Transfer from Soil to the Food Chain Is Low after Long-Term (20 Years) Field Applications of Sewage Sludge

A - Papers appearing in refereed journals

Wang, P., Menzies, N. W., Chen, H., Yang, X., McGrath, S. P., Zhao, F-J. and Kopittke, P. M. 2018. Risk of Silver Transfer from Soil to the Food Chain Is Low after Long-Term (20 Years) Field Applications of Sewage Sludge. Environmental Science & Technology. 52 (8), pp. 4901-4909. https://doi.org/10.1021/acs.est.8b00204

Neonicotinoids

A - Papers appearing in refereed journals

Bass, C. and Field, L. M. 2018. Neonicotinoids. Current Biology. 28 (14), pp. R772-R773. https://doi.org/10.1016/j.cub.2018.05.061

A method for uncertainty constraint of catchment discharge and phosphorus load estimates

A - Papers appearing in refereed journals

Holloway, M. J., Beven K. J., Benskin, C. Mc. W. H., Collins, A. L., Evans, R., Fallon, P. D., Forber, K. J., Hiscock, K. M., Kahana R., Macleod, C. J. A., Ockenden, M. C., Villamizar, M., Wearing, C., Withers, P. J. A., Zhou, J. G., Barber, N. J. and Haygarth, P. M. 2018. A method for uncertainty constraint of catchment discharge and phosphorus load estimates. Hydrological Processes. 32 (17), pp. 2779-2787. https://doi.org/10.1002/hyp.13217

Co-occurrence of defensive traits in the potato aphid Macrosiphum euphorbiae

A - Papers appearing in refereed journals

Clarke, H. V., Foster, S. P., Oliphant, L., Waters, E. W. and Karley, A. J. 2018. Co-occurrence of defensive traits in the potato aphid Macrosiphum euphorbiae. Ecological Entomology. 43 (4), pp. 538-542. https://doi.org/10.1111/een.12522

The anaplerotic node is essential for the intracellular survival of Mycobacterium tuberculosis

A - Papers appearing in refereed journals

Basu, P., Sandhu, N., Bhatt, A., Singh, A., Balhana, R., Gobe, I., Crowhurst, N. A., Mendum, T. A., Gao, L., Ward, J. L., Beale, M. H., McFadden J. and Beste, D. J. V. 2018. The anaplerotic node is essential for the intracellular survival of Mycobacterium tuberculosis. Journal of Biological Chemistry. 293 (15), pp. 5695-5704. https://doi.org/10.1074/jbc.RA118.001839

The adaptation of Fusarium culmorum to DMI Fungicides Is Mediated by Major Transcriptome Modifications in Response to Azole Fungicide, Including the Overexpression of a PDR Transporter (FcABC1).

A - Papers appearing in refereed journals

Hellin, P., King, R., Urban, M., Hammond-Kosack, K. E. and Legreve, A 2018. The adaptation of Fusarium culmorum to DMI Fungicides Is Mediated by Major Transcriptome Modifications in Response to Azole Fungicide, Including the Overexpression of a PDR Transporter (FcABC1). Frontiers in Microbiology. 9 (1385). https://doi.org/10.3389/fmicb.2018.01385

Dynamic changes of soil erosion in a typical disturbance zone of China's Three Gorges Reservoir

A - Papers appearing in refereed journals

Bao, Y., He, X., Wen, A., Gao, P., Tang, Q., Yan, D. and Long, Y. 2018. Dynamic changes of soil erosion in a typical disturbance zone of China's Three Gorges Reservoir. Catena. 169, pp. 128-139. https://doi.org/10.1016/j.catena.2018.05.032

Higher flight activity in the offspring of migrants compared to residents in a migratory insect

A - Papers appearing in refereed journals

Dällenbach, L. J., Glauser, A., Lim, K. S., Chapman, J. W. and Menz, M. H. M. 2018. Higher flight activity in the offspring of migrants compared to residents in a migratory insect. Proceedings of the Royal Society B: Biological Sciences. 285 (1881), p. 2829. https://doi.org/10.1098/rspb.2017.2829

A pore-scale model for simulating water flow in unsaturated soil

A - Papers appearing in refereed journals

Hu, W., Guofeng, L. and Zhang, X. 2018. A pore-scale model for simulating water flow in unsaturated soil . Microfluidics and Nanofluidics. 22 (7), p. 22:71. https://doi.org/10.1007/s10404-018-2090-0

Plant roots redesign the rhizosphere to alter the three-dimensional physical architecture and water dynamics

A - Papers appearing in refereed journals

Rabbi, S. M. F., Tighe, M. K., Flavel, R. J., Kaiser, B. N., Guppy, C. N., Zhang, X. and Young, I. M. 2018. Plant roots redesign the rhizosphere to alter the three-dimensional physical architecture and water dynamics . New Phytologist. 219 (2), pp. 542-550. https://doi.org/10.1111/nph.15213

A model based on Rock-Eval thermal analysis to quantify the size of the centennially persistent organic carbon pool in temperate soils

A - Papers appearing in refereed journals

Cecillon, L., Baudin, F., Chenu, C., Houot, S., Jolivet, R., Katterer, T., Lutfalla, S., Macdonald, A. J., Van Oort, F., Plante, A. F., Savignac, F., Soucemarianadin, L. N. and Barre, P. 2018. A model based on Rock-Eval thermal analysis to quantify the size of the centennially persistent organic carbon pool in temperate soils . Biogeosciences. 15 (9), pp. 2835-2849. https://doi.org/10.5194/bg-15-2835-2018

Plant desiccation tolerance and its regulation in the foliage of resurrection “Flowering-Plant” species

A - Papers appearing in refereed journals

Blomstedt, C. K., Griffiths, C. A., Gaff, C. A., Hamill, J. D. and Neale, A. D. 2018. Plant desiccation tolerance and its regulation in the foliage of resurrection “Flowering-Plant” species. Agronomy. 8 (8), p. 146. https://doi.org/10.3390/agronomy8080146

Hidden variation in polyploid wheat drives local adaptation

A - Papers appearing in refereed journals

Gardiner, L.-J., Joynson, R., Omony, J., Rusholme-Pilcher, R., Olohan, L., Lang, D., Bai, C., Hawkesford, M. J., Salt, D., Spannagl, M., Mayer, K. F. X., Kenny, J., Bevan, M., Hall, N. and Hall, A. 2018. Hidden variation in polyploid wheat drives local adaptation. Genome Research. 28, pp. 1-14. https://doi.org/10.1101/gr.233551.117

Evidence for functional state transitions in intensively-managed soil ecosystems

A - Papers appearing in refereed journals

Todman, L. C., Fraser, F. C., Corstanje, R., Harris, J. A., Pawlett, M., Ritz, K. and Whitmore, A. P. 2018. Evidence for functional state transitions in intensively-managed soil ecosystems. Scientific Reports. 8 (11522). https://doi.org/10.1038/s41598-018-29925-2

Towards FAIRer Biological Knowledge Networks Using a Hybrid Linked Data and Graph Database Approach

A - Papers appearing in refereed journals

Brandizi, M., Singh, A., Rawlings, C. J. and Hassani-Pak, K. 2018. Towards FAIRer Biological Knowledge Networks Using a Hybrid Linked Data and Graph Database Approach. Journal of Integrative Bioinformatics. 15 (3), pp. 1-10. https://doi.org/10.1515/jib-2018-0023

(2R,5S)‐Theaspirane Identified as the Kairomone for the Banana Weevil, Cosmopolites sordidus, from Attractive Senesced Leaves of the Host Banana, Musa spp.

A - Papers appearing in refereed journals

Abagale, S. A., Woodcock, C. M., Hooper, A. M., Caulfield, J. C., Withall, D., Chamberlain, K., Acquaah, S. O., Van Emden, H., Braimah, H., Pickett, J. A. and Birkett, M. A. 2018. (2R,5S)‐Theaspirane Identified as the Kairomone for the Banana Weevil, Cosmopolites sordidus, from Attractive Senesced Leaves of the Host Banana, Musa spp. Chemistry-A European Journal. 24 (37), pp. 9217-9219. https://doi.org/10.1002/chem.201800315

Using Hermetia illucens to process Ugandan waragi waste

A - Papers appearing in refereed journals

Dobermann, D., Field, L. M. and Michaelson, L. V. 2018. Using Hermetia illucens to process Ugandan waragi waste . Journal of Cleaner Production. 211 (20 February), pp. 303-308. https://doi.org/10.1016/j.jclepro.2018.11.176

The effect of an initial high-quality feeding regime on the survival of Gryllus bimaculatus (black cricket) on bio-waste

A - Papers appearing in refereed journals

Dobermann, D., Michaelson, L. V. and Field, L. M. 2018. The effect of an initial high-quality feeding regime on the survival of Gryllus bimaculatus (black cricket) on bio-waste. Journal of Insects as Food and Feed. 5 (2), pp. 117-123. https://doi.org/10.3920/JIFF2018.0024

Development and characterisation of protein films derived from dried distillers’ grains with solubles and in-process samples

A - Papers appearing in refereed journals

Prabhakumari, P., Chatzifragkou, A., Kosik, O., Lovegrove, A., Shewry, P. R. and Charalampopoulos, D 2018. Development and characterisation of protein films derived from dried distillers’ grains with solubles and in-process samples. Industrial Crops and Products. 121 (1 October), pp. 258-266. https://doi.org/10.1016/j.indcrop.2018.05.016

Response of cell wall composition and RNA-seq transcriptome to methyl-jasmonate in Brachypodium distachyon callus

A - Papers appearing in refereed journals

Hyde, L. S., Pellny, T. K., Freeman, J., Michaelson, L. V., Simister, R., McQueen-Mason, S. J. and Mitchell, R. A. C. 2018. Response of cell wall composition and RNA-seq transcriptome to methyl-jasmonate in Brachypodium distachyon callus . Planta. 248 (5), pp. 1213-1229. https://doi.org/10.1007/s00425-018-2968-9

Small Water Bodies in Great Britain and Ireland: Ecosystem function, human-generated degradation, and options for restorative action

A - Papers appearing in refereed journals

Riley, W. D., Potter, E. C. E., Collins, A. L., Biggs, J., Jarvie, H. P., Jones, J. I., Kelly-Quinn, M., Ormerod, S. J., Sear, D. A., Wilby, R. L., Broadmeadow, S., Brown, C. D., Chanin, P., Copp, G. H., Cowx, I. G., Grogan, A., Hornby, D. D., Huggett, D., Kelly, M. G., Naura, M., Newman, J. R. and Siriwardena, G. M. 2018. Small Water Bodies in Great Britain and Ireland: Ecosystem function, human-generated degradation, and options for restorative action. Science of the Total Environment. 645, pp. 1598-1616. https://doi.org/10.1016/j.scitotenv.2018.07.243

Framework for life cycle assessment of livestock production systems to account for the nutritional quality of final products

A - Papers appearing in refereed journals

Mcauliffe, G. A., Takahashi, T. and Lee, M. R. F. 2018. Framework for life cycle assessment of livestock production systems to account for the nutritional quality of final products. Food and Energy Security. https://doi.org/10.1002/fes3.143

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