Rothamsted Research

TitleRothamsted Research
TypeInstitute

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Evidence for a pervasive 'idling-mode' activity template in flying and pedestrian insects

A - Papers appearing in refereed journals
Reynolds, A. M., Jones, H. B. C., Hill, J. K., Pearson, A. J., Wilson, K., Wolf, S., Lim, K. S., Reynolds, D. R. and Chapman, J. W. 2015. Evidence for a pervasive 'idling-mode' activity template in flying and pedestrian insects. Royal Society Open Science. 2, p. 150085. https://doi.org/10.1098/rsos.150085

A priority-based queuing process explanation for scale-free foraging behaviours

A - Papers appearing in refereed journals
Reynolds, A. M., Ropert-Coudert, Y., Kato, A., Chiaradia, A. and Macintosh, A. J. J. 2015. A priority-based queuing process explanation for scale-free foraging behaviours. Animal Behaviour. 108, pp. 67-71. https://doi.org/10.1016/j.anbehav.2015.07.022

Extending Levy search theory from one to higher dimensions: Levy walking favours the blind

A - Papers appearing in refereed journals
Reynolds, A. M. 2015. Extending Levy search theory from one to higher dimensions: Levy walking favours the blind. Proceedings of the Royal Society A: Mathematical, Physical and Engineering Sciences. 471, p. 20150123. https://doi.org/10.1098/rspa.2015.0123

10 years later: revisiting priorities for science and society a decade after the Millennium Ecosystem Assessment

B - Book chapters etc edited externally
Mulder, C., Bennett, E. M., Bonkowski, M., Carpenter, S. R., Chalmers, R., Cramer, W., Durance, I., Eisenhauer, N., Fontaine, C. and Haughton, A. J. 2015. 10 years later: revisiting priorities for science and society a decade after the Millennium Ecosystem Assessment. in: Woodward, G. and Bohan, D. A. (ed.) Elsevier.

Dietary fibre: wheat genes for enhanced human health

C1 - Edited contributions to conferences/learned societies
Mitchell, R. A. C. and Shewry, P. R. 2015. Dietary fibre: wheat genes for enhanced human health. Ogihara, Y., Handa, H. and Takumi, S. (ed.) Advances in Wheat Genetics: from Genome to Field. Proceedings 12th International Wheat Genetics Symposium . Springer, Tokyo. pp. 411-419 https://doi.org/10.1007/978-4-431-55675-6_46

Gibberellin metabolism

B - Book chapters etc edited externally
Hedden, P. and Phillips, A. L. 2015. Gibberellin metabolism. in: Hausinger, R. P. and Schofield, C. J. (ed.) 2-Oxoglutarate-dependent oxygenases Royal Society of Chemistry (RSC), Cambridge. pp. 367-384

Accumulation of ascorbate in the leaves of Arabidopsis thaliana wildtype and vtc2 mutants under continuous light and short photoperiod conditions

C1 - Edited contributions to conferences/learned societies
De Simone, A., Pellny, T. K. and Foyer, C. H. 2015. Accumulation of ascorbate in the leaves of Arabidopsis thaliana wildtype and vtc2 mutants under continuous light and short photoperiod conditions. Breeding Plants to Cope with Future Climate Change. Aspects of Applied Biology 124 . Association of Applied Biologists (AAB) Wellesbourne Warwick . pp. 123-130

Nitrous oxide emissions from fertilised UK arable soils: fluxes, emission factors and mitigation

A - Papers appearing in refereed journals
Bell, M. J., Hinton, N., Cloy, J. M., Topp, C. F. E., Rees, R. M., Cardenas, L. M., Scott, T., Webster, C. P., Ashton, R. W., Whitmore, A. P., Williams, J. R., Balshaw, H., Paine, F., Goulding, K. W. T. and Chadwick, D. R. 2015. Nitrous oxide emissions from fertilised UK arable soils: fluxes, emission factors and mitigation. Agriculture, Ecosystems & Environment. 212, pp. 134-147. https://doi.org/10.1016/j.agee.2015.07.003

Peroxisomal ABC transporters: functions and mechanisms

A - Papers appearing in refereed journals
Baker, A., Carrier, D. J., Schaedler, T. A., Waterham, H. R., Van Roermund, C. W. and Theodoulou, F. L. 2015. Peroxisomal ABC transporters: functions and mechanisms. Biochemical Society Transactions. 43, pp. 959-965. https://doi.org/10.1042/BST20150127

Designing strategies for epidemic control in a tree nursery: the case of ash dieback in the UK

A - Papers appearing in refereed journals
Alonso Chavez, V., Parnell, S. and Van Den Bosch, F. 2015. Designing strategies for epidemic control in a tree nursery: the case of ash dieback in the UK. Forests. 6 (11), pp. 4135-4145. https://doi.org/10.3390/f6114135

Soil pH determines microbial diversity and composition in the Park Grass Experiment

A - Papers appearing in refereed journals
Zhalnina, K., Dias, R., De Quadros, P. D., Davis-Richardson, A., Camargo, F. A. O., Clark, I. M., McGrath, S. P., Hirsch, P. R. and Triplett, E. W. 2015. Soil pH determines microbial diversity and composition in the Park Grass Experiment. Microbial Ecology. 69, pp. 395-406. https://doi.org/10.1007/s00248-014-0530-2

Differentially penalized regression to predict agronomic traits from metabolites and markers in wheat

A - Papers appearing in refereed journals
Ward, J. L., Rakszegi, M., Bedo, Z., Shewry, P. R. and Mackay, I. 2015. Differentially penalized regression to predict agronomic traits from metabolites and markers in wheat. BMC Genetics. 16, p. 19. https://doi.org/10.1186/s12863-015-0169-0

The Aspergillus fumigatus pkcA G579R mutant is defective in the activation of the cell wall integrity pathway but is dispensable for virulence in a neutropenic mouse infection model

A - Papers appearing in refereed journals
Rocha, M. C., De Godoy, K. F., De Castro, P. A., Hori, J. I., Bom, V. L. P., Brown, N. A., Da Cunha, A. F., Goldman, G. H. and Malavazi, I. 2015. The Aspergillus fumigatus pkcA G579R mutant is defective in the activation of the cell wall integrity pathway but is dispensable for virulence in a neutropenic mouse infection model. PLOS ONE. 10, p. e0135195. https://doi.org/10.1371/journal.pone.0135195

Responses of parasitoids to volatiles induced by Chilo partellus oviposition on teosinte, a wild ancestor of maize

A - Papers appearing in refereed journals
Mutyambai, D. M., Bruce, T. J. A., Midega, C. A. O., Woodcock, C. M., Caulfield, J. C., Van Den Berg, J., Pickett, J. A. and Khan, Z. R. 2015. Responses of parasitoids to volatiles induced by Chilo partellus oviposition on teosinte, a wild ancestor of maize. Journal of Chemical Ecology. 41, pp. 323-329. https://doi.org/10.1007/s10886-015-0570-1

Climate-adapted companion cropping increases agricultural productivity in East Africa

A - Papers appearing in refereed journals
Midega, C. A. O., Bruce, T. J. A., Pickett, J. A., Pittchar, J. O., Murage, A. and Khan, Z. R. 2015. Climate-adapted companion cropping increases agricultural productivity in East Africa. Field Crops Research. 180, pp. 118-125. https://doi.org/10.1016/j.fcr.2015.05.022

Ecological management of cereal stemborers in African smallholder agriculture through behavioural manipulation

A - Papers appearing in refereed journals
Midega, C. A. O., Bruce, T. J. A., Pickett, J. A. and Khan, Z. R. 2015. Ecological management of cereal stemborers in African smallholder agriculture through behavioural manipulation. Ecological Entomology. 40 (Supplement S1), pp. 70-81. https://doi.org/10.1111/een.12216

An analysis of Pseudomonas genomic diversity in take-all infected wheat fields reveals the lasting impact of wheat cultivars on the soil microbiota

A - Papers appearing in refereed journals
Mauchline, T. H., Chedom-Fotso, D., Chandra, G., Samuels, T., Greenaway, N., Backhaus, A., Mcmillan, V. E., Canning, G., Powers, S. J., Hammond-Kosack, K. E., Hirsch, P. R., Clark, I. M., Mehrabi, Z., Roworth, J., Burnell, J. and Malone, J. G. 2015. An analysis of Pseudomonas genomic diversity in take-all infected wheat fields reveals the lasting impact of wheat cultivars on the soil microbiota. Environmental Microbiology. 17 (11), pp. 4764-4778. https://doi.org/10.1111/1462-2920.13038

Over 150 years of long-term fertilization alters spatial scaling of microbial biodiversity

A - Papers appearing in refereed journals
Liang, Y., Wu, Liyou, Clark, I. M., Xue, K., Yang, Y., Van Nostrand, J. D., Deng, Y., He, Z., McGrath, S. P., Storkey, J., Hirsch, P. R., Sun, B. and Zhou, J. 2015. Over 150 years of long-term fertilization alters spatial scaling of microbial biodiversity. mBio. 6, pp. e00240-15. https://doi.org/10.1128/mBio.00240-15

Mutation scanning in wheat by exon capture and next-generation sequencing

A - Papers appearing in refereed journals
King, R., Bird, N., Ramirez-Gonzalez, R., Coghill, J. A., Patil, A., Hassani-Pak, K., Uauy, C. and Phillips, A. L. 2015. Mutation scanning in wheat by exon capture and next-generation sequencing. PLOS ONE. 10, p. e0137549. https://doi.org/10.1371/journal.pone.0137549

Resequencing at >40-fold depth of the parental genomes of a Solanum lycopersicum x S. pimpinellifolium recombinant inbred line population and characterization of frame-shift InDels that are highly likely to perturb protein function

A - Papers appearing in refereed journals
Kevei, Z., King, R., Mohareb, F., Sergeant, M. J., Awan, S. Z. and Thompson, A. J. 2015. Resequencing at >40-fold depth of the parental genomes of a Solanum lycopersicum x S. pimpinellifolium recombinant inbred line population and characterization of frame-shift InDels that are highly likely to perturb protein function. G3: Genes, Genomes, Genetics. 5, pp. 971-981. https://doi.org/10.1534/g3.114.016121

Evolutionary longitudinal network dynamics of global zoonotic research

A - Papers appearing in refereed journals
Hossain, L., Karimi, F., Wigand, R. T. and Crawford, J. W. 2015. Evolutionary longitudinal network dynamics of global zoonotic research. Scientometrics. 103, pp. 337-353. https://doi.org/10.1007/s11192-015-1557-y

Networks of preparedness and response during Australian H1N1 outbreak

A - Papers appearing in refereed journals
Hossain, L., Bdeir, F., Crawford, J. W. and Wigand, R. T. 2015. Networks of preparedness and response during Australian H1N1 outbreak. Disaster Medicine and Public Health Preparedness. 9, pp. 155-165. https://doi.org/10.1017/dmp.2014.88

The importance of the microbial N cycle in soil for crop plant nutrition

B - Book chapters etc edited externally
Hirsch, P. R. and Mauchline, T. H. 2015. The importance of the microbial N cycle in soil for crop plant nutrition. in: Sariaslani, S. and Gadd, G. M. (ed.) Advances in Applied Microbiology Vol.93 Elsevier.

ECERIFERUM2-LIKE proteins have unique biochemical and physiological functions in very-long-chain fatty acid elongation

A - Papers appearing in refereed journals
Haslam, T. M., Haslam, R. P., Thoraval, D., Pascal, S., Delude, C., Domergue, F., Fernandez, A. M., Beaudoin, F., Napier, J. A., Kunst, L. and Joubes, J. 2015. ECERIFERUM2-LIKE proteins have unique biochemical and physiological functions in very-long-chain fatty acid elongation. Plant Physiology. 167, pp. 682-692. https://doi.org/10.1104/pp.114.253195

The biosynthesis of allelopathic di-C-glycosylflavones from the roots of Desmodium incanum (G. Mey) DC

A - Papers appearing in refereed journals
Hao, B., Caulfield, J. C., Hamilton, M. L., Pickett, J. A., Midega, C. A. O., Khan, Z. R., Wang, J. R. and Hooper, A. M. 2015. The biosynthesis of allelopathic di-C-glycosylflavones from the roots of Desmodium incanum (G. Mey) DC. Organic and Biomolecular Chemistry. 13, pp. 11663-11673. https://doi.org/10.1039/c5ob01926e

G-fibre cell wall development in willow stems during tension wood induction

A - Papers appearing in refereed journals
Gritsch, C., Wan, Y., Mitchell, R. A. C., Shewry, P. R., Hanley, S. J. and Karp, A. 2015. G-fibre cell wall development in willow stems during tension wood induction. Journal of Experimental Botany. 66 (20), pp. 6447-6459. https://doi.org/10.1093/jxb/erv358

X-ray micro-computed tomography in willow reveals tissue patterning of reaction wood and delay in programmed cell death

A - Papers appearing in refereed journals
Brereton, N. J. B., Ahmed, F., Sykes, D., Ray, M. J., Shield, I. F., Karp, A. and Murphy, R. J. 2015. X-ray micro-computed tomography in willow reveals tissue patterning of reaction wood and delay in programmed cell death. BMC Plant Biology. 15, p. 83. https://doi.org/10.1186/s12870-015-0438-0

Atmospheric H2S and SO2 as sulfur source for Brassica juncea and Brassica rapa: impact on the glucosinolate composition

A - Papers appearing in refereed journals
Aghajanzadeh, T. A., Kopriva, S., Hawkesford, M. J., Koprivova, A. and De Kok, L. J. 2015. Atmospheric H2S and SO2 as sulfur source for Brassica juncea and Brassica rapa: impact on the glucosinolate composition. Frontiers in Plant Science. 6, p. 924. https://doi.org/10.3389/fpls.2015.00924

Global Research Alliance Modelling Platform (GRAMP): an open web platform for modelling greenhouse gas emissions from agro-ecosystems

A - Papers appearing in refereed journals
Yeluripati, J. B., Del Prado, A., Sanz-Cobena, A., Rees, R. M., Li, C., Chadwick, D., Tilston, E., Topp, C. F. E., Cardenas, L. M., Ingraham, P., Gilhespy, S. L., Anthony, S., Vetter, S. H., Misselbrook, T. H., Salas, W. and Smith, P. 2015. Global Research Alliance Modelling Platform (GRAMP): an open web platform for modelling greenhouse gas emissions from agro-ecosystems. Computers and Electronics in Agriculture. 111 (February), pp. 112-120. https://doi.org/10.1016/j.compag.2014.11.016

Modelling the impact of environmental changes on grassland systems with SPACSYS

C1 - Edited contributions to conferences/learned societies
Wu, L., Whitmore, A. P. and Bellocchi, G. 2015. Modelling the impact of environmental changes on grassland systems with SPACSYS. Proceedings of the MACSUR International Livestock Modelling and Research Colloquium . Cambridge University Press (CUP) Cambridge. https://doi.org/10.1017/S2040470014000508

Technologies for increasing carbon storage in soil to mitigate climate change

A - Papers appearing in refereed journals
Whitmore, A. P., Kirk, G. J. D. and Rawlins, B. G. 2015. Technologies for increasing carbon storage in soil to mitigate climate change. Soil Use and Management. 31 (Suppl. 1), pp. 62-71. https://doi.org/10.1111/sum.12115

The use of mathematical models to guide fungicide resistance management decisions

B - Book chapters etc edited externally
Van Den Bosch, F., Fraaije, B. A., Oliver, R., Van Den Berg, F. and Paveley, N. 2015. The use of mathematical models to guide fungicide resistance management decisions. in: Hollomon, D. W. and Ishii, H. (ed.) Fungicide resistance in plant pathogens Springer, Tokyo. pp. 49-62

Evidence-based resistance management: a review of existing evidence

B - Book chapters etc edited externally
Van Den Bosch, F., Paveley, N., Fraaije, B. A., Van Den Berg, F. and Oliver, R. 2015. Evidence-based resistance management: a review of existing evidence. in: Hollomon, D. W. and Ishii, H. (ed.) Fungicide resistance in plant pathogens Springer, Tokyo. pp. 63-76

Stable expression and functional characterisation of the diamondback moth ryanodine receptor G4946E variant conferring resistance to diamide insecticides

A - Papers appearing in refereed journals
Troczka, B. J., Williams, A. J., Williamson, M. S., Field, L. M., Luemmen, P. and Davies, T. G. E. 2015. Stable expression and functional characterisation of the diamondback moth ryanodine receptor G4946E variant conferring resistance to diamide insecticides. Scientific Reports. 5, p. 14680. https://doi.org/10.1038/srep14680

Source identification of fine-grained suspended sediment in the Kharaa River basin, northern Mongolia

A - Papers appearing in refereed journals
Theuring, P., Collins, A. L. and Rode, M. 2015. Source identification of fine-grained suspended sediment in the Kharaa River basin, northern Mongolia. Science of the Total Environment. 526, pp. 77-87. https://doi.org/10.1016/j.scitotenv.2015.03.134

Digestibility of gluten proteins is reduced by baking and enhanced by starch digestion

A - Papers appearing in refereed journals
Smith, F., Pan, X., Bellido, V., Toole, G. A., Gates, F. K., Wickham, M. S. J., Shewry, P. R., Bakalis, S., Padfield, P. and Mills, E. N. C. 2015. Digestibility of gluten proteins is reduced by baking and enhanced by starch digestion. Molecular Nutrition & Food Research. 59 (10), pp. 2034-2043. https://doi.org/10.1002/mnfr.201500262

Adapting wheat ideotypes for climate change: accounting for uncertainties in CMIP5 climate projections

A - Papers appearing in refereed journals
Semenov, M. A. and Stratonovitch, P. 2015. Adapting wheat ideotypes for climate change: accounting for uncertainties in CMIP5 climate projections. Climate Research. 65, pp. 123-139. https://doi.org/10.3354/cr01297

An analysis of local wind and air mass directions and their impact on Cladosporium distribution using HYSPLIT a circular statistics

A - Papers appearing in refereed journals
Sadys, M., Kennedy, R. and Skjoth, C. A. 2015. An analysis of local wind and air mass directions and their impact on Cladosporium distribution using HYSPLIT a circular statistics. Fungal Ecology. 18, pp. 56-66. https://doi.org/10.1016/j.funeco.2015.09.006

Development of a biotic index using stream macroinvertebrates to assess stress from deposited fine sediment

A - Papers appearing in refereed journals
Murphy, J. F., Jones, J. I., Pretty, J. L., Duerdoth, C. P., Hawczak, A., Arnold, A., Blackburn, J. H., Naden, P. S., Old, G., Sear, D. A., Hornby, D., Clarke, R. T. and Collins, A. L. 2015. Development of a biotic index using stream macroinvertebrates to assess stress from deposited fine sediment. Freshwater Biology. 60 (10), pp. 2019-2036. https://doi.org/10.1111/fwb.12627

Genetic diversity for root plasticity and nitrogen uptake in wheat seedlings

A - Papers appearing in refereed journals
Melino, V. J., Fiene, G., Enju, A., Cai, J., Buchner, P. H. and Heuer, S. 2015. Genetic diversity for root plasticity and nitrogen uptake in wheat seedlings. Functional Plant Biology. 42, pp. 942-956. https://doi.org/10.1071/FP15041

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