Rothamsted Research

TitleRothamsted Research
TypeInstitute

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The variable response of soil microorganisms to trace concentrations of low molecular weight organic substrates of increasing complexity

A - Papers appearing in refereed journals
Dungait, J. A. J., Kemmitt, S. J., Michallon, L., Guo, S., Wen, Q., Brookes, P. C. and Evershed, R. P. 2013. The variable response of soil microorganisms to trace concentrations of low molecular weight organic substrates of increasing complexity. Soil Biology and Biochemistry. 64, pp. 57-64. https://doi.org/10.1016/j.soilbio.2013.03.036

Estimation of uncertainty in the dailyDAYCENT model: experiment with UK cropland

C2 - Non-edited contributions to conferences
Datta, A., Fitton, N., Topp, K., Cloy, J., Rees, B., Cardenas, L. M., Williams, J., Smith, K. and Smith, P. 2013. Estimation of uncertainty in the dailyDAYCENT model: experiment with UK cropland. Abstracts International Conference on Soil Carbon Sequestration for Climate, Food Security and Ecosystem Services, Reykjavik, 26-29 May 2013 .

Measuring soil protist respiration and ingestion rates using stable isotopes

A - Papers appearing in refereed journals
Crotty, F. V., Adl, S. M., Blackshaw, R. P. and Murray, P. J. 2013. Measuring soil protist respiration and ingestion rates using stable isotopes. Soil Biology and Biochemistry. 57, pp. 919-921. https://doi.org/10.1016/j.soilbio.2012.10.039

Food security: a systems approach. White paper presented at EU Science: Global Challenges and Global Collaboration, Brussels, 6 March 2013

G - Articles in popular magazines and other technical publications
Mcmurray, G., Arruda, C., Britton, D., Eidenberger, T., Evans, S., Gibney, M., Mccarthy, U., Moran, L., Opara, L., Saner, S. and West, J. S. 2013. Food security: a systems approach. White paper presented at EU Science: Global Challenges and Global Collaboration, Brussels, 6 March 2013.

GA-responsive dwarfing gene Rht12 affects the developmental and agronomic traits in common bread wheat

A - Papers appearing in refereed journals
Chen, L., Phillips, A. L., Condon, A. G., Parry, M. A. J. and Hu, Y-G. 2013. GA-responsive dwarfing gene Rht12 affects the developmental and agronomic traits in common bread wheat. PLOS ONE. 8, p. e62285. https://doi.org/10.1371/journal.pone.0062285

Using the phenotypic information in the PHI-base database to explore pathogen genomes, transcriptomes and proteomes

C2 - Non-edited contributions to conferences
Urban, M., Antoniw, J. F., Martins, N., Lysenko, A., Grzebyta, J., Janowska-Sedja, E., Saqi, M. and Hammond-Kosack, K. E. 2013. Using the phenotypic information in the PHI-base database to explore pathogen genomes, transcriptomes and proteomes. Abstracts 27th Fungal Genetics Conference, Asilomar, 12-17 March 2013 . pp. 177

Transcriptional changes of the root-knot nematode Meloidogyne incognita in response to Arabidopsis thaliana root signals

A - Papers appearing in refereed journals
Teillet, A., Dybal, K., Kerry, B. R., Miller, A. J., Curtis, R. H. C. and Hedden, P. 2013. Transcriptional changes of the root-knot nematode Meloidogyne incognita in response to Arabidopsis thaliana root signals. PLOS ONE. 8, p. e61259. https://doi.org/10.1371/journal.pone.0061259

Durable resistance to crop pathogens: an epidemiological framework to predict risk under uncertainty

A - Papers appearing in refereed journals
Lo Iacono, G., Van Den Bosch, F. and Gilligan, C. A. 2013. Durable resistance to crop pathogens: an epidemiological framework to predict risk under uncertainty. PLOS Computational Biology. 9, p. e1002870. https://doi.org/10.1371/journal.pcbi.1002870

Exploring the metabolome of cereal infecting fusaria

C2 - Non-edited contributions to conferences
Hammond-Kosack, K. E., Lowe, R. G. T., Canning, G., Urban, M., Beale, M. H. and Ward, J. L. 2013. Exploring the metabolome of cereal infecting fusaria. Abstracts 27th Fungal Genetics Conference, Asilomar, 12-17 March 2013 . pp. 21

Red oilseed rape? The potential for manipulation of petal colour in control strategies for the pollen beetle (Meligethes aeneus)

A - Papers appearing in refereed journals
Cook, S. M., Skellern, M. P., Doring, T. F. and Pickett, J. A. 2013. Red oilseed rape? The potential for manipulation of petal colour in control strategies for the pollen beetle (Meligethes aeneus). Arthropod-Plant Interactions. 7, pp. 249-258. https://doi.org/10.1007/s11829-013-9252-5

The effect of Horsfall-Barratt category size on the accuracy and reliability of estimates of pecan scab severity

A - Papers appearing in refereed journals
Bock, C. H., Wood, B. W., Van Den Bosch, F., Parnell, S. and Gottwald, T. R. 2013. The effect of Horsfall-Barratt category size on the accuracy and reliability of estimates of pecan scab severity. Plant Disease. 97 (6), pp. 797-806. https://doi.org/10.1094/PDIS-08-12-0781-RE

Enhancing beetle and spider communities in agricultural grasslands: the roles of seed addition and habitat management

A - Papers appearing in refereed journals
Woodcock, B. A., Savage, J., Bullock, J. M., Nowakowski, M., Orr, R. J., Tallowin, J. R. B. and Pywell, R. F. 2013. Enhancing beetle and spider communities in agricultural grasslands: the roles of seed addition and habitat management. Agriculture, Ecosystems & Environment. 167, pp. 79-85. https://doi.org/10.1016/j.agee.2013.01.009

Field sampling for environmental science and management

E - Books edited/written by staff member, alone/with others
Webster, R. and Lark, R. M. 2013. Field sampling for environmental science and management. Routledge Abingdon.

Effect of dough mixing on wheat endosperm cell walls

A - Papers appearing in refereed journals
Toole, G. A., Selvatico, E., Salt, L. J., Le Gall, G., Colquhoun, I. J., Wellner, N., Shewry, P. R. and Mills, E. N. C. 2013. Effect of dough mixing on wheat endosperm cell walls. Journal of Agricultural and Food Chemistry - JAFC. 61, pp. 2522-2529. https://doi.org/10.1021/jf304677u

Getting an even break

G - Articles in popular magazines and other technical publications
Theodoulou, F. L. 2013. Getting an even break. Biochemist. 35(3), p. 3.

Floral monsters and murderous mirror images

G - Articles in popular magazines and other technical publications
Theodoulou, F. L. 2013. Floral monsters and murderous mirror images. Biochemist. 35(2), p. 3.

Peroxisome membrane proteins: multiple trafficking routes and multiple functions?

A - Papers appearing in refereed journals
Theodoulou, F. L., Bernhardt, K., Linka, N. and Baker, A. 2013. Peroxisome membrane proteins: multiple trafficking routes and multiple functions? Biochemical Journal. 451, pp. 345-352. https://doi.org/10.1042/BJ20130078

Soil fertility

B - Book chapters etc edited externally
Stockdale, E. A., Goulding, K. W. T., George, T. S. and Murphy, D. V. 2013. Soil fertility. in: Nortcliff, S. and Gregory, P. J. (ed.) Soil conditions and plant growth, 12th ed. Blackwell Publishing Oxford. pp. 49-85

Improving the content and composition of dietary fibre in wheat

B - Book chapters etc edited externally
Shewry, P. R. 2013. Improving the content and composition of dietary fibre in wheat. in: Poutanen, K. and Delcour, J. A. (ed.) Fibre-rich and wholegrain foods: improving quality Woodhead Publishing, Oxford. pp. 153-169

Soil organic matter

B - Book chapters etc edited externally
Powlson, D. S., Smith, P. and De Nobili, M. 2013. Soil organic matter. in: Nortcliff, S. and Gregory, P. J. (ed.) Soil conditions and plant growth, 12th ed. Blackwell Publishing Oxford. pp. 86-131

Characterisation of stuA homologue in Fusarium culmorum

C2 - Non-edited contributions to conferences
Pasquali, M., Spanu, F., Balmas, V., Scherm, B., Hammond-Kosack, K. E., Hoffmann, L., Beyer, M. and Migheli, Q. 2013. Characterisation of stuA homologue in Fusarium culmorum. Abstracts 27th Fungal Genetics Conference, Asilomar, 12-17 March 2013 . pp. 185

FcStuA from Fusarium culmorum controls wheat foot and root rot in a toxin dispensable manner

A - Papers appearing in refereed journals
Pasquali, M., Spanu, F., Scherm, B., Balmas, V., Hoffmann, L., Hammond-Kosack, K. E., Beyer, M. and Migheli, Q. 2013. FcStuA from Fusarium culmorum controls wheat foot and root rot in a toxin dispensable manner. PLOS ONE. 8, p. e57429 (14pp). https://doi.org/10.1371/journal.pone.0057429

Grass cell wall feruloylation: distribution of bound ferulate and candidate gene expression in Brachypodium distachyon

A - Papers appearing in refereed journals
Molinari, H. B. C., Pellny, T. K., Freeman, J., Shewry, P. R. and Mitchell, R. A. C. 2013. Grass cell wall feruloylation: distribution of bound ferulate and candidate gene expression in Brachypodium distachyon. Frontiers in Plant Science. 4, p. 50 (10pp). https://doi.org/10.3389/fpls.2013.00050

Microbial biomass growth, following incorporation of biochars produced at 350 degrees C or 700 degrees C, in a silty-clay loam soil of high and low pH

A - Papers appearing in refereed journals
Luo, Y., Durenkamp, M., De Nobili, M., Lin, Q., Devonshire, B. J. and Brookes, P. C. 2013. Microbial biomass growth, following incorporation of biochars produced at 350 degrees C or 700 degrees C, in a silty-clay loam soil of high and low pH. Soil Biology and Biochemistry. 57, pp. 513-523. https://doi.org/10.1016/j.soilbio.2012.10.033

Modelling the effects of copper on soil organisms and processes using the free ion approach: towards a multi-species toxicity model

A - Papers appearing in refereed journals
Lofts, S., Criel, P., Janssen, C. R., Lock, K., McGrath, S. P., Oorts, K., Rooney, C. P., Smolders, E., Spurgeon, D. J., Svendsen, C., Van Eeckhout, H. and Zhao, F-J. 2013. Modelling the effects of copper on soil organisms and processes using the free ion approach: towards a multi-species toxicity model. Environmental Pollution. 178, pp. 244-253. https://doi.org/10.1016/j.envpol.2013.03.015

One fungus, one name: defining the genus Fusarium in a scientifically robust way that preserves longstanding use

A - Papers appearing in refereed journals
Geiser, D. M., Aoki, T., Bacon, C. W., Baker, S. E., Bhattacharyya, M. K., Brandt, M. E., Brown, D. W., Burgess, L. W., Chulze, S., Coleman, J. J., Correll, J. C., Covert, S. F., Crous, P. W., Cuomo, C. A., De Hoog, G. S., Di Pietro, A., Elmer, W. H., Epstein, L., Frandsen, R. J. N., Freeman, S., Gagkaeva, T., Glenn, A. E., Gordon, T. R., Gregory, N. F. and Hammond-Kosack, K. E. 2013. One fungus, one name: defining the genus Fusarium in a scientifically robust way that preserves longstanding use. Phytopathology. 103 (5), pp. 400-408. https://doi.org/10.1094/PHYTO-07-12-0150-LE

Modification of the RothC model for simulations of soil organic C dynamics in dryland regions

A - Papers appearing in refereed journals
Farina, R., Coleman, K. and Whitmore, A. P. 2013. Modification of the RothC model for simulations of soil organic C dynamics in dryland regions. Geoderma. 200-201, pp. 18-30. https://doi.org/10.1016/j.geoderma.2013.01.021

Characterization of the sterol 14alpha-demethylases of Fusarium graminearum identifies a novel genus-specific CYP51 function

A - Papers appearing in refereed journals
Fan, J., Urban, M., Parker, J. E., Brewer, H. C., Kelly, S. L., Hammond-Kosack, K. E., Fraaije, B. A., Liu, X. and Cools, H. J. 2013. Characterization of the sterol 14alpha-demethylases of Fusarium graminearum identifies a novel genus-specific CYP51 function. New Phytologist. 198 (3), pp. 821-835. https://doi.org/10.1111/nph.12193

Microbial responses to the erosional redistribution of soil organic carbon in arable fields

A - Papers appearing in refereed journals
Dungait, J. A. J., Ghee, C., Rowan, J. S., Mckenzie, B. M., Hawes, C., Dixon, E. R., Paterson, E. and Hopkins, D. W. 2013. Microbial responses to the erosional redistribution of soil organic carbon in arable fields. Soil Biology and Biochemistry. 60, pp. 195-201. https://doi.org/10.1016/j.soilbio.2013.01.027

Estimating soil acidification rate at watershed scale based on the stoichiometric relations between silicon and base cations

A - Papers appearing in refereed journals
Yang, J-L., Zhang, G-L., Huang, L-M. and Brookes, P. C. 2013. Estimating soil acidification rate at watershed scale based on the stoichiometric relations between silicon and base cations. Chemical Geology. 337-338, pp. 30-37. https://doi.org/10.1016/j.chemgeo.2012.11.009

Fate of nitrogen following shallow injection of livestock slurry to grassland

C2 - Non-edited contributions to conferences
Williams, J., Thorman, R., Chambers, B., Sagoo, L., Misselbrook, T. H. and Chadwick, D. R. 2013. Fate of nitrogen following shallow injection of livestock slurry to grassland. Abstracts RAMIRAN 2013: 15th International Conference on Recycling of Organic Residues for Agriculture - from Waste Management to Ecosystem Services, Versailles, 3-5 June 2013 .

Shallow injection of livestock slurry to grassland: effects on the balance of nitrous oxide and ammonia

C2 - Non-edited contributions to conferences
Williams, J., Sagoo, L., Chambers, B., Thorman, R., Misselbrook, T. H. and Chadwick, D. R. 2013. Shallow injection of livestock slurry to grassland: effects on the balance of nitrous oxide and ammonia. Abstracts Greenhouse Gases and Animal Agriculture (GGAA) Conference, Dublin, 23-26 June 2013 .

The importance of direct and indirect nitrous oxide emissions from contrasting cattle slurry application timings

C2 - Non-edited contributions to conferences
Williams, J., Chambers, B., Thorman, R., Sagoo, L., Chadwick, D. R. and Misselbrook, T. H. 2013. The importance of direct and indirect nitrous oxide emissions from contrasting cattle slurry application timings. Abstracts Greenhouse Gases and Animal Agriculture (GGAA) Conference, Dublin, 23-26 June 2013 .

Genotypic variation in the ability of wheat roots to penetrate wax layers

A - Papers appearing in refereed journals
Whalley, W. R., Dodd, I. C., Watts, C. W., Webster, C. P., Phillips, A. L., Andralojc, P. J., White, Robin P., Davies, W. J. and Parry, M. A. J. 2013. Genotypic variation in the ability of wheat roots to penetrate wax layers. Plant and Soil. 364, pp. 171-179. https://doi.org/10.1007/s11104-012-1342-0

Development of the Miniature Virtual Impactor - MVI - for long-term and automated air sampling to detect plant pathogen spores

C2 - Non-edited contributions to conferences
West, J. S., Canning, G., Heard, S. and Wili, S. G. 2013. Development of the Miniature Virtual Impactor - MVI - for long-term and automated air sampling to detect plant pathogen spores. Abstracts EU PURE Project Conference on Future IPM in Europe, Riva del Garda, 19-21 March 2013 .

High levels of auto-infection in plant pathogens favour short latent periods: a theoretical approach

A - Papers appearing in refereed journals
Van Den Berg, F., Gaucel, S., Lannou, C., Gilligan, C. A. and Van Den Bosch, F. 2013. High levels of auto-infection in plant pathogens favour short latent periods: a theoretical approach. Evolutionary Ecology. 27, pp. 409-428. https://doi.org/10.1007/s10682-012-9602-2

Using functional traits to quantify the value of plant communities to invertebrate ecosystem service providers in arable landscapes

A - Papers appearing in refereed journals
Storkey, J., Brooks, D. R., Haughton, A. J., Hawes, C., Smith, B. M. and Holland, J. M. 2013. Using functional traits to quantify the value of plant communities to invertebrate ecosystem service providers in arable landscapes. Journal of Ecology. 101 (1), pp. 38-46. https://doi.org/10.1111/1365-2745.12020

Natural variation in grain composition of wheat and related cereals

A - Papers appearing in refereed journals
Shewry, P. R., Hawkesford, M. J., Piironen, V., Lampi, A-M., Gebruers, K., Boros, D., Andresson, A. A. M., Aman, P., Rakszegi, M., Bedo, Z. and Ward, J. L. 2013. Natural variation in grain composition of wheat and related cereals. Journal of Agricultural and Food Chemistry - JAFC. 61, pp. 8295-8303. https://doi.org/10.1021/jf3054092

Preface (to EuroCereal 2011 special issue)

G - Articles in popular magazines and other technical publications
Shewry, P. R. and Penson, S. 2013. Preface (to EuroCereal 2011 special issue). Journal of Cereal Science. 57 (2), p. 161. https://doi.org/10.1016/j.jcs.2012.11.001

How do N2O fluxes determined using five static closed chambers and an auto-sampler compare?

C2 - Non-edited contributions to conferences
Cardenas, L. M., Misselbrook, T. H., Donovan, N., Norris, S., Murray, R. L., Cancer-Berroya, E., Hodgson, C. J. and Chadwick, D. R. 2013. How do N2O fluxes determined using five static closed chambers and an auto-sampler compare? Abstracts Greenhouse Gases and Animal Agriculture (GGAA) Conference, Dublin, 23-26 June 2013 .

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