Rothamsted Research

TitleRothamsted Research
TypeInstitute

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Cell surface immune receptors: the guardians of the plant’s extracellular spaces

A - Papers appearing in refereed journals
Kanyuka, K. and Rudd, J. J. 2019. Cell surface immune receptors: the guardians of the plant’s extracellular spaces. Current Opinion in Plant Biology. 50, pp. 1-8. https://doi.org/10.1016/j.pbi.2019.02.005

The role of photoprotection in disease resistance to Septoria tritici blotch in wheat

C2 - Non-edited contributions to conferences
Angelopoulou, D., Kanyuka, K., Murchie, E. and Ray, R. 2019. The role of photoprotection in disease resistance to Septoria tritici blotch in wheat. International Symposium on Cereal Leaf Blights 2019. University College Dublin, Dublin, Ireland 22 May 2019

Knocking down wheat meiotic genes through Virus-induced gene-silencing (VIGS)

C2 - Non-edited contributions to conferences
Desjardins, S., Kanyuka, K. and Higgins, J. D. 2019. Knocking down wheat meiotic genes through Virus-induced gene-silencing (VIGS). The Plant and Animal Genome XXVII Conference (PAG). San Diego, CA, USA 12 Jan 2019

MSH2 is required for obligate crossover formation in wheat

C2 - Non-edited contributions to conferences
Ogle, D., Desjardins, S., Gutterman, I., Simmonds, J., Uauy, C., Kanyuka, K. and Higgins, J. D. 2019. MSH2 is required for obligate crossover formation in wheat. The Plant and Animal Genome XXVII Conference (PAG). San Diego, CA, USA 12 Jan 2019

The sources and dynamics of fine-grained sediment degrading the Freshwater Pearl Mussel (Margaritifera margaritifera) beds of the River Torridge, Devon, UK

A - Papers appearing in refereed journals
Pulley, S., Goubet, A., Mosser, I., Browning, S. and Collins, A. L. 2019. The sources and dynamics of fine-grained sediment degrading the Freshwater Pearl Mussel (Margaritifera margaritifera) beds of the River Torridge, Devon, UK. Science of the Total Environment. 657 (March 20), pp. 420-434. https://doi.org/10.1016/j.scitotenv.2018.11.401

Does the “high sugar” trait of perennial ryegrass cultivars express under temperate climate conditions?

A - Papers appearing in refereed journals
Rivero, M. J., Balocchi, O. A., Moscoso, C.J., Siebald, J. A., Neumann, F. L., Meyer, D. and Lee, M. R. F. 2019. Does the “high sugar” trait of perennial ryegrass cultivars express under temperate climate conditions? Grass and Forage Science. 74 (3), pp. 496-508. https://doi.org/10.1111/gfs.12406

Implications of crop model ensemble size and composition for estimates of adaptation effects and agreement of recommendations

A - Papers appearing in refereed journals
Rodriguez, A., Ruiz-Ramos, M., Palosuo, T., Carter, T. R., Fronzek, S., Lorite, I. J., Ferrise, R., Pirttioja, N., Bindi, M., Baronowski, P., Buis, S., Cammarano, D., Chen, Y., Dumont, B., Ewert, F., Gaiser, T., Hlavinka, P., Hoffman, H., Hohn, J. G., Jurecka, F., Kersebaum, K. C., Krzyszczak, J., Lana, M., Mechiche-Alami, A., Minet, J., Montesino, M., Nendel, C., Porter, J. R, Ruget, F., Semenov, M. A., Steinmetz, Z., Stratonovitch, P., Supit, I., Tao, F., Trnka, M., de Wit, A. and Rotter, R. P. 2019. Implications of crop model ensemble size and composition for estimates of adaptation effects and agreement of recommendations . Agricultural and Forest Meteorology. 264, pp. 351-362. https://doi.org/10.1016/j.agrformet.2018.09.018

Climate change impact and adaptation for wheat protein

A - Papers appearing in refereed journals
Asseng, S., Martre, P., Maiorano, A., Rotter, R. P., O'Leary, G. J., Fitzgerald, G. J., Girousse, C., Motzo, R., Giunta, F., Babar, M. A., Reynolds, M. P., Kheir, A. M. S., Thorburn, P. J., Ruane, A. C., Waha, K, Aggarwal, P. K., Ahmed, M., Balkovic, J., Basso, B., Biernath, C., Bindi, M., Cammarano, D., Challinor, A. J., De Sanctis, D., Dumont, B., Eyshi Rezaei, E., Fereres, E., Ferrise, R., Garcia-Vila, M., Gayler, S., Gao, Y., Horan, H., Hoggenboom, G., Izaurralde, R. C., Jabloun, M., Jones, C., Kassie, B. T., Kersebaum, K-C., Klein, C., Koehler, A-K., Liu, B., Minoli, S., San Martin, M. M., Muller, C., Kumar, S. N., Nendel, C., Olesen, J. E., Palosuo, T., Porter, J., Priesack, E., Ripoche, D., Semenov, M. A., Stöckle, C., Stratonovitch, P., Streck, T., Supit, I., Tao, F., Van der Velde, M., Wallach, D., Wang, E., Webber, H., Wolf, J., Xiao, L., Zhang, Z., Zhao, Z., Zhu, Y. and Ewert, F. 2019. Climate change impact and adaptation for wheat protein. Global Change Biology. 25 (1), pp. 155-173. https://doi.org/10.1111/gcb.14481

Investigating the importance of recreational roads as a sediment source in a mountainous catchment using a fingerprinting procedure with different multivariate statistical techniques and a Bayesian un-mixing model

A - Papers appearing in refereed journals
Nosrati, K. and Collins, A. L. 2019. Investigating the importance of recreational roads as a sediment source in a mountainous catchment using a fingerprinting procedure with different multivariate statistical techniques and a Bayesian un-mixing model. Journal of Hydrology. 569 (February), pp. 506-518. https://doi.org/10.1016/j.jhydrol.2018.12.019

Sampling for disease absence-deriving informed monitoring from epidemic traits

A - Papers appearing in refereed journals
Bourhis, Y., Gottwald, T.R., Lopez-Ruiz, F.J., Patarapuwadol, S. and Van Den Bosch, F. 2019. Sampling for disease absence-deriving informed monitoring from epidemic traits. Journal of Theoretical Biology. 461, pp. 8-16. https://doi.org/10.1016/j.jtbi.2018.10.038

A loop-mediated isothermal amplification (LAMP) assay for rapid and specific detection of airborne inoculum of Uromyces betae (sugar beet rust)

A - Papers appearing in refereed journals
Kaczmarek, A. M., King, K. M., West, J. S., Stevens, M., Sparkes, D. and Dickinson, M. 2019. A loop-mediated isothermal amplification (LAMP) assay for rapid and specific detection of airborne inoculum of Uromyces betae (sugar beet rust). Plant Disease. 103 (3), pp. 417-421. https://doi.org/10.1094/PDIS-02-18-0337-RE

Land-use type affects nitrate production and consumption pathways in subtropical acidic soils

A - Papers appearing in refereed journals
Zhang, Y., Ding, H., Zheng, X., Ren, X., Cardenas, L. M., Carswell, A. M. and Misselbrook, T. H. 2019. Land-use type affects nitrate production and consumption pathways in subtropical acidic soils. Geoderma. 337 (1), pp. 22-31. https://doi.org/10.1016/j.geoderma.2018.09.012

Adequate vegetative cover decreases nitrous oxide emissions from cattle urine deposited in grazed pastures under rainy season conditions

A - Papers appearing in refereed journals
Chirinda, N., Loaiza, S., Arenas, L., Ruiz, V., Faverin, C., Alvarez, C., Savian, J. V., Belfon, R., Zuniga, K., Morales, L., Trujillo, C., Arango, M., Rao, I., Arango, J., Peters, M., Barahona, R., Costa, C., Rosenstock, T. S., Richards, M., Martinez-Baron, D. and Cardenas, L. M. 2019. Adequate vegetative cover decreases nitrous oxide emissions from cattle urine deposited in grazed pastures under rainy season conditions. Scientific Reports. 9 (908). https://doi.org/10.1038/s41598-018-37453-2

Improved isotopic model based on 15N tracing and Rayleigh-type isotope fractionation for simulating differential sources of N2O emissions in a clay grassland soil

A - Papers appearing in refereed journals
Castellano-Hinojosa, A., Loick, N., Dixon, E. R., Matthews, P., Lewicka-Szczebak, D., Well, R., Bol, R., Charteris, A. and Cardenas, L. M. 2019. Improved isotopic model based on 15N tracing and Rayleigh-type isotope fractionation for simulating differential sources of N2O emissions in a clay grassland soil. Rapid Communications in Mass Spectrometry. https://doi.org/10.1002/rcm.8374

Responses of carbon, nitrogen and phosphorus to two consecutive drying–rewetting cycles in soils

A - Papers appearing in refereed journals
Pezzola, D., Cardenas, L. M., Mian, I. A., Carswell, A. M., Donovan, N., Dhanoa, D. and Blackwell, M. S. A. 2019. Responses of carbon, nitrogen and phosphorus to two consecutive drying–rewetting cycles in soils. Journal of Plant Nutrition and Soil Science. 182 (2), pp. 217-228. https://doi.org/10.1002/jpln.201800082

Short-term air temperature forecasting using Nonparametric Functional Data Analysis and SARMA models

A - Papers appearing in refereed journals
Curceac, S., Ternynck, C., Ouarda, T. B. M. J, Chebana, F. and Niang, S. D. 2019. Short-term air temperature forecasting using Nonparametric Functional Data Analysis and SARMA models. Environmental Modelling and Software. 111, pp. 394-408. https://doi.org/10.1016/j.envsoft.2018.09.017

Accounting for data sparsity when forming spatially coherent zones

A - Papers appearing in refereed journals
Hassall, K. L., Whitmore, A. P. and Milne, A. E. 2019. Accounting for data sparsity when forming spatially coherent zones. Applied Mathematical Modelling. 72 (August), pp. 537-552. https://doi.org/10.1016/j.apm.2019.03.030

Improving wheat as a source of iron and zinc for global nutrition

A - Papers appearing in refereed journals
Balk, J., Connorton J. M., Wan, Y., Lovegrove, A., Moore, K. L., Uauy, C., Sharp, P. A. and Shewry, P. R. 2019. Improving wheat as a source of iron and zinc for global nutrition. Nutrition Bulletin. 44 (1), pp. 53-59. https://doi.org/10.1111/nbu.12361

Oat and lipolysis: Food matrix effect

A - Papers appearing in refereed journals
Wilde, P. J., Garcia-Llatas, G., Lagarda, M. J, Haslam, R. P. and Grundy, M. M. L. 2019. Oat and lipolysis: Food matrix effect. Food Chemistry. 278 (25 April), pp. 683-691. https://doi.org/10.1016/j.foodchem.2018.11.113

A framework for the regional critical zone classification: the case of the Chinese Loess Plateau

A - Papers appearing in refereed journals
Lu, Y, Hu, J, Fu, B., Harris, P., Wu, L., Tong, X., Bai, Y. and Comber, A. J. 2019. A framework for the regional critical zone classification: the case of the Chinese Loess Plateau . National Science Review. 16 (1), pp. 14-18. https://doi.org/10.1093/nsr/nwy147

Comparison of ammonia emissions related to nitrogen use efficiency of livestock production in Europe

A - Papers appearing in refereed journals
Groenestein, C.M., Hutchings, N.J., Haenel, H.D., Amon, B., Menzi, H., Mikkelsen, M.H., Misselbrook, T. H., van Bruggen, C., Kupper, T. and Webb, J. 2019. Comparison of ammonia emissions related to nitrogen use efficiency of livestock production in Europe. Journal of Cleaner Production. 211 (20 February), pp. 1162-1170. https://doi.org/10.1016/j.jclepro.2018.11.143

Phacelia (Phacelia tanacetifolia Benth.) affects soil structure differently depending on soil texture

A - Papers appearing in refereed journals
Bacq-Labreuil, A., Crawford, J. W., Mooney, S., Neal, A. L. and Ritz, K. 2019. Phacelia (Phacelia tanacetifolia Benth.) affects soil structure differently depending on soil texture. Plant and Soil. 441 (1-2), p. 543–554. https://doi.org/10.1007/s11104-019-04144-4

A high-resolution map of soil pH in China made by hybrid modelling of sparse soil data and environmental covariates and its implications for pollution

A - Papers appearing in refereed journals
Chen, S., Liang, Z., Webster, R., Zhang, G., Zhou, Y., Teng, H., Hi, B., Arrouays, D. and Shi, Z. 2019. A high-resolution map of soil pH in China made by hybrid modelling of sparse soil data and environmental covariates and its implications for pollution. Science of the Total Environment. 655, pp. 273-283. https://doi.org/10.1016/j.scitotenv.2018.11.230

Cover crop species have contrasting influence upon soil structural genesis and microbial community phenotype

A - Papers appearing in refereed journals
Bacq-Labreuil, A., Crawford, J. W., Mooney, S., Neal, A. L. and Ritz, K. 2019. Cover crop species have contrasting influence upon soil structural genesis and microbial community phenotype. Scientific Reports. 9 (7473). https://doi.org/10.1038/s41598-019-43937-6

Sequence-specific nucleases as tools for enhancing disease resistance in crops

A - Papers appearing in refereed journals
Nekrasov, V. 2019. Sequence-specific nucleases as tools for enhancing disease resistance in crops. Transgenic Research. 28 (Supplement 2), pp. 75-80. https://doi.org/10.1007/s11248-019-00137-2

Increasing livestock wastewater application in alternate-furrow irrigation reduces nitrification gene abundance but not nitrification rate in rhizosphere

A - Papers appearing in refereed journals
Lui, Y., Neal, A. L., Zhang, X., Cui, E., Gao, F., Fan, X., Hu, C. and Li, Z. 2019. Increasing livestock wastewater application in alternate-furrow irrigation reduces nitrification gene abundance but not nitrification rate in rhizosphere. Biology And Fertility Of Soils. pp. 1-17. https://doi.org/10.1007/s00374-019-01361-y

Extension of Partial Gene Transcripts by Iterative Mapping of RNA-Seq Raw Reads

A - Papers appearing in refereed journals
Singh, K. S., Troczka, B. J., Beadle, K., Field, L. M., Davies, T. G. E., Williamson, M. S., Nauen, R and Bass, C. 2019. Extension of Partial Gene Transcripts by Iterative Mapping of RNA-Seq Raw Reads. IEEE-ACM Transactions on Computational Biology and Bioinformatics. 16 (3), pp. 1036-1041. https://doi.org/10.1109/TCBB.2018.2865309

Calcium Exerts a Strong Influence upon Phosphohydrolase Gene Abundance and Phylogenetic Diversity in Soil

A - Papers appearing in refereed journals
Neal, A. L. and Glendining, M. L. 2019. Calcium Exerts a Strong Influence upon Phosphohydrolase Gene Abundance and Phylogenetic Diversity in Soil. Soil Biology and Biochemistry. 139 (December), p. 107613. https://doi.org/10.1016/j.soilbio.2019.107613

Modelling the effect of spatially variable soil properties on the distribution of weeds

A - Papers appearing in refereed journals
Metcalfe, H., Milne, A. E., Coleman, K., Murdoch, A. J. and Storkey, J. 2019. Modelling the effect of spatially variable soil properties on the distribution of weeds. Ecological Modelling. 396 (24 March), pp. 1-11. https://doi.org/10.1016/j.ecolmodel.2018.11.002

Fate and transport of urea-N in a rain-fed ridge-furrow crop system with plastic mulch

A - Papers appearing in refereed journals
Guo, S., Jiang, R., Qu, H., Wang, Y., Misselbrook, T., Gunina, A. and Kuzyakov, Y. 2019. Fate and transport of urea-N in a rain-fed ridge-furrow crop system with plastic mulch . Soil & Tillage Research. 186 (March), pp. 214-223. https://doi.org/10.1016/j.still.2018.10.022

Field scale temporal and spatial variability of δ13C, δ15N, TC and TN soil properties : Implications for sediment source tracing

A - Papers appearing in refereed journals
Collins, A. L., Burak, E., Harris, P., Pulley, S., Cardenas, L. M. and Tang, Q. 2019. Field scale temporal and spatial variability of δ13C, δ15N, TC and TN soil properties : Implications for sediment source tracing. Geoderma. 333 (1 January), pp. 108-122. https://doi.org/10.1016/j.geoderma.2018.07.019

Variations in soil and plant-microbiome composition with different quality irrigation waters and biochar supplementation

A - Papers appearing in refereed journals
Cui, E., Fan, X., Li, Z., Liu, Y., Neal, A. L., Hu, C. and Gao, F. 2019. Variations in soil and plant-microbiome composition with different quality irrigation waters and biochar supplementation. Applied Soil Ecology. 142, pp. 99-109. https://doi.org/10.1016/j.apsoil.2019.04.026

Development of pull and push-pull systems for management of Lesser Mealworm, Alphitobius diaperinus, in poultry houses using alarm and aggregation pheromones

A - Papers appearing in refereed journals
Hassemer, M., Borges, M., Withall, D., Pickett, J. A., Laumann, R. A., Birkett, M. A. and Blassioli-Moraes, M. C. 2019. Development of pull and push-pull systems for management of Lesser Mealworm, Alphitobius diaperinus, in poultry houses using alarm and aggregation pheromones. Pest Management Science. 75 (4), pp. 1107-1114. https://doi.org/10.1002/ps.5225

Soil nitrous oxide emissions from grassland: potential inhibitor effect of hippuric acid

A - Papers appearing in refereed journals
Ciganda, V. S., Lopez-Aizpun, M., Repullo, M. A., Wu, D., Terra, J. A., Elustondo, D., Clough, T. and Cardenas, L. M. 2019. Soil nitrous oxide emissions from grassland: potential inhibitor effect of hippuric acid. Journal of Plant Nutrition and Soil Science. 182, pp. 40-47. https://doi.org/10.1002/jpln.201700393

The relationships between seedling root screens, root growth in the field and grain yield for wheat

A - Papers appearing in refereed journals
Bai, C., Ge, Y., Ashton, R. W., Evans, J., Milne, A. E., Hawkesford, M. J., Whalley, W. R., Parry, M. A. J., Melichar, J., Feuerhelm, D., Bansept, P. and Bartsch, M. 2019. The relationships between seedling root screens, root growth in the field and grain yield for wheat . Plant and Soil. https://doi.org/10.1007/s11104-019-04088-9

Assessment of empirical algorithms for bathymetry extraction using Sentinel-2 data

A - Papers appearing in refereed journals
Casal, G., Monteys, X., Hedley, J., Harris, P., Cahalane, C. and McCarthy, T. 2019. Assessment of empirical algorithms for bathymetry extraction using Sentinel-2 data. International Journal Of Remote Sensing. https://doi.org/10.1080/01431161.2018.1533660

Acrylamide: new European risk management measures and prospects for reducing the acrylamide-forming potential of wheat

B - Book chapters etc edited externally
Halford, N. G. and Raffan, S. 2019. Acrylamide: new European risk management measures and prospects for reducing the acrylamide-forming potential of wheat. in: Food-Borne Toxicants: Formation, Analysis, and Toxicology Washington DC American Chemical Society (ACS). pp. Chapter 3, pp 27–43

Sustainable Development Goal 2: improved targets and indicators for agriculture and food security

A - Papers appearing in refereed journals
Juliana Dias Bernandes Gil, Pytrik Reidsma, Ken Giller, Lindsay Todman, Whitmore, A. P. and Martin van Ittersum 2019. Sustainable Development Goal 2: improved targets and indicators for agriculture and food security . AMBIO: A Journal of the Human Environment. 48 (7), pp. 685-698. https://doi.org/10.1007/s13280-018-1101-4

Acrylamide in Food

E - Books edited/written by staff member, alone/with others
Halford, N. G. and Curtis, T. 2019. Acrylamide in Food. World Sci Publ Co Inc.

Quantifying the spatio-temporal drivers of planned vegetation restoration on ecosystem services at a large regional scale

A - Papers appearing in refereed journals
Liu, Y., Lu, Y., Fu, B-J., Harris, P. and Wu, L. 2019. Quantifying the spatio-temporal drivers of planned vegetation restoration on ecosystem services at a large regional scale. Science of the Total Environment. 650 (1), pp. 1029-1040. https://doi.org/10.1016/j.scitotenv.2018.09.082

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