Rothamsted Research

TitleRothamsted Research
TypeInstitute

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Putting the brakes on a cycle: bottom-up effects damp cycle amplitude

A - Papers appearing in refereed journals
Bell, J. R., Burkness, E. C., Milne, A. E., Onstad, D. W., Abrahamson, M., Hamilton, K. L. and Hutchison, W. D. 2012. Putting the brakes on a cycle: bottom-up effects damp cycle amplitude. Ecology Letters. 15 (4), pp. 310-318. https://doi.org/10.1111/j.1461-0248.2011.01739.x

The trait and host plant ecology of aphids and their distribution and abundance in the United Kingdom

A - Papers appearing in refereed journals
Bell, J. R., Taylor, M. S., Shortall, C. R., Welham, S. J. and Harrington, R. 2012. The trait and host plant ecology of aphids and their distribution and abundance in the United Kingdom. Global Ecology and Biogeography. 21 (4), pp. 405-415. https://doi.org/10.1111/j.1466-8238.2011.00685.x

Study of Miscanthus x giganteus ash composition - variation with agronomy and assessment method

A - Papers appearing in refereed journals
Baxter, X. C., Darvell, L. I., Jones, J. M., Barraclough, T. J. P., Yates, N. E. and Shield, I. F. 2012. Study of Miscanthus x giganteus ash composition - variation with agronomy and assessment method. Fuel. 95, pp. 50-62. https://doi.org/10.1016/j.fuel.2011.12.025

Mesocosm experiments to assess the transmission of Pandora neoaphidis within simple and mixed field margins and over the crop-margin interface

A - Papers appearing in refereed journals
Baverstock, J., Torrance, M. T., Clark, S. J. and Pell, J. K. 2012. Mesocosm experiments to assess the transmission of Pandora neoaphidis within simple and mixed field margins and over the crop-margin interface. Journal of Invertebrate Pathology. 110, pp. 102-107. https://doi.org/10.1016/j.jip.2012.02.012

2-Carboxy-D-arabinitol 1-phosphate (CA1P) phosphatase: evidence for a wider role in plant Rubisco regulation

A - Papers appearing in refereed journals
Andralojc, P. J., Madgwick, P. J., Tao, Y., Keys, A. J., Ward, J. L., Beale, M. H., Loveland, J. E., Jackson, P. J., Willis, A. C., Gutteridge, S. and Parry, M. A. J. 2012. 2-Carboxy-D-arabinitol 1-phosphate (CA1P) phosphatase: evidence for a wider role in plant Rubisco regulation. Biochemical Journal. 442 (3), pp. 733-742. https://doi.org/10.1042/BJ20111443

Heterologous expression of the yeast arsenite efflux system ACR3 improves Arabidopsis thaliana tolerance to arsenic stress

A - Papers appearing in refereed journals
Ali, W., Isner, J-C., Isayenkov, S. V., Liu, W., Zhao, F-J. and Maathuis, F. J. M. 2012. Heterologous expression of the yeast arsenite efflux system ACR3 improves Arabidopsis thaliana tolerance to arsenic stress. New Phytologist. 194 (3), pp. 716-723. https://doi.org/10.1111/j.1469-8137.2012.04092.x

Carbon dynamics in a 60 year fallowed loamy-sand soil compared to that in a 60 year permanent arable or permanent grassland UK soil

A - Papers appearing in refereed journals
Wu, Y., Kemmitt, S., White, Robin P., Xu, J. and Brookes, P. C. 2012. Carbon dynamics in a 60 year fallowed loamy-sand soil compared to that in a 60 year permanent arable or permanent grassland UK soil. Plant and Soil. 352, pp. 51-63. https://doi.org/10.1007/s11104-011-0979-4

Trehalose 6-phosphate is required for the onset of leaf senescence associated with high carbon availability

A - Papers appearing in refereed journals
Wingler, A., Delatte, T. L., O'hara, L. E., Primavesi, L. F., Jhurreea, D., Paul, M. J. and Schluepmann, H. 2012. Trehalose 6-phosphate is required for the onset of leaf senescence associated with high carbon availability. Plant Physiology. 158 (3), pp. 1241-1251. https://doi.org/10.1104/pp.111.191908

The S-poor prolamins of wheat, barley and rye: revisited

A - Papers appearing in refereed journals
Tatham, A. S. and Shewry, P. R. 2012. The S-poor prolamins of wheat, barley and rye: revisited. Journal of Cereal Science. 55, pp. 79-99. https://doi.org/10.1016/j.jcs.2011.10.013

A novel function for a redox-related LEA protein (SAG21/AtLEA5) in root development and biotic stress responses

A - Papers appearing in refereed journals
Salleh, F. M., Evans, K., Goodall, B., Machin, H., Mowla, S. B., Mur, L. A. J., Runions, J., Theodoulou, F. L., Foyer, C. H. and Rogers, H. J. 2012. A novel function for a redox-related LEA protein (SAG21/AtLEA5) in root development and biotic stress responses. Plant, Cell and Environment. 35 (2), pp. 418-429. https://doi.org/10.1111/j.1365-3040.2011.02394.x

Distribution of calcium (Ca) and magnesium (Mg) in the leaves of Brassica rapa under varying exogenous Ca and Mg supply

A - Papers appearing in refereed journals
Rios, J. J., O Lochlainn, S., Devonshire, J., Graham, N. S., Hammond, J. P., King, G. J., White, P. J., Kurup, S. and Broadley, M. R. 2012. Distribution of calcium (Ca) and magnesium (Mg) in the leaves of Brassica rapa under varying exogenous Ca and Mg supply. Annals of Botany. 109, pp. 1081-1089. https://doi.org/10.1093/aob/mcs029

Localisation of iron in wheat grain using high resolution secondary ion mass spectrometry

A - Papers appearing in refereed journals
Moore, K. L., Zhao, F-J., Gritsch, C. S., Tosi, P., Hawkesford, M. J., McGrath, S. P., Shewry, P. R. and Grovenor, C. R. M. 2012. Localisation of iron in wheat grain using high resolution secondary ion mass spectrometry. Journal of Cereal Science. 55 (2), pp. 183-187. https://doi.org/10.1016/j.jcs.2011.11.005

Tissue preparation using Arabidopsis

B - Book chapters etc edited externally
Llewellyn, A. M., Lewis, J., Miller, S. J., Corol, D. I., Beale, M. H. and Ward, J. L. 2012. Tissue preparation using Arabidopsis. in: Hall, R. D. and Hardy, N. W. (ed.) Plant metabolomics: methods and protocols (Methods in Molecular Biology, vol. 860 Springer, New York. pp. 65-81

Long-term removal of wheat straw decreases soil amorphous silica at Broadbalk, Rothamsted

A - Papers appearing in refereed journals
Guntzer, F., Keller, C., Poulton, P. R., McGrath, S. P. and Meunier, J-D. 2012. Long-term removal of wheat straw decreases soil amorphous silica at Broadbalk, Rothamsted. Plant and Soil. 352 (1-2), pp. 173-184. https://doi.org/10.1007/s11104-011-0987-4

An assessment of a new model of dynamic fragmentation of soil with test data

A - Papers appearing in refereed journals
Gregory, A. S., Bird, N. R. A., Watts, C. W. and Whitmore, A. P. 2012. An assessment of a new model of dynamic fragmentation of soil with test data. Soil & Tillage Research. 120, pp. 61-68. https://doi.org/10.1016/j.still.2011.11.007

Assigning Brassica microsatellite markers to the nine C-genome chromosomes using Brassica rapa var. tricularis-B.oleracea var. alboglabra monosomic alien addition lines

A - Papers appearing in refereed journals
Geleta, M., Heneen, W. K., Stoute, A. I., Muttucumaru, N., Scott, R. J., King, G. J., Kurup, S. and Bryngelsson, T. 2012. Assigning Brassica microsatellite markers to the nine C-genome chromosomes using Brassica rapa var. tricularis-B.oleracea var. alboglabra monosomic alien addition lines. Theoretical and Applied Genetics. 125, pp. 455-466. https://doi.org/10.1007/s00122-012-1845-3

Impacts of nitrogen application rates on the activity and diversity of denitrifying bacteria in the Broadbalk Wheat Experiment

A - Papers appearing in refereed journals
Clark, I. M., Buchkina, N., Jhurreea, D., Goulding, K. W. T. and Hirsch, P. R. 2012. Impacts of nitrogen application rates on the activity and diversity of denitrifying bacteria in the Broadbalk Wheat Experiment. Philosophical Transactions of the Royal Society B-Biological Sciences. 367, pp. 1235-1244. https://doi.org/10.1098/rstb.2011.0314

Combined NMR and flow injection ESI-MS for Brassicaceae metabolomics

B - Book chapters etc edited externally
Baker, J. M., Ward, J. L. and Beale, M. H. 2012. Combined NMR and flow injection ESI-MS for Brassicaceae metabolomics. in: Hall, R. D. and Hardy, N. W. (ed.) Plant metabolomics: methods and protocols (Methods in Molecular Biology, vol. 860) Springer, New York. pp. 177-191

Confidential report to Syngenta, January 2012

D1 - Technical reports: non-confidential
Mcmillan, V. E., Hammond-Kosack, K. E. and Gutteridge, R. J. 2012. Confidential report to Syngenta, January 2012.

Genetic basis of control of Rynchosporium secalis infection and symptom expression in barley

A - Papers appearing in refereed journals
Looseley, M. E., Newton, A. C., Atkins, S. D., Fitt, B. D. L., Fraaije, B. A., Thomas, W. T. B., Keith, R., Macaulay, M., Lynott, J. and Harrap, D. 2012. Genetic basis of control of Rynchosporium secalis infection and symptom expression in barley. Euphytica. 184, pp. 47-56. https://doi.org/10.1007/s10681-011-0485-z

ELPIS-JP: a dataset of local-scale daily climate change scenarios for Japan

A - Papers appearing in refereed journals
Iizumi, T., Semenov, M. A., Nishimori, M., Ishigooka, Y. and Kuwagata, T. 2012. ELPIS-JP: a dataset of local-scale daily climate change scenarios for Japan. Philosophical Transactions of the Royal Society A-Mathematical Physical and Engineering Sciences. 370, pp. 1121-1139. https://doi.org/10.1098/rsta.2011.0305

Floral climatic and soil pH controls on leaf ash content in China's terrestrial plants

A - Papers appearing in refereed journals
Han, W., Chen, Y., Zhao, F-J., Tang, L., Jiang, R. and Zhang, F. 2012. Floral climatic and soil pH controls on leaf ash content in China's terrestrial plants. Global Ecology and Biogeography. 21 (3), pp. 376-382. https://doi.org/10.1111/j.1466-8238.2011.00677.x

The acrylamide problem: a plant and agronomic science issue

A - Papers appearing in refereed journals
Halford, N. G., Curtis, T. Y., Muttucumaru, N., Postles, J., Elmore, J. S. and Mottram, D. S. 2012. The acrylamide problem: a plant and agronomic science issue. Journal of Experimental Botany. 63, pp. 2841-2851. https://doi.org/10.1093/jxb/ers011

Risk assessment studies on succinate dehydrogenase inhibitors, the new weapons in the battle to control Septoria leaf blotch in wheat

A - Papers appearing in refereed journals
Fraaije, B. A., Bayon, C., Atkins, S., Cools, H. J., Lucas, J. A. and Fraaije, M. W. 2012. Risk assessment studies on succinate dehydrogenase inhibitors, the new weapons in the battle to control Septoria leaf blotch in wheat. Molecular Plant Pathology. 13 (3), pp. 263-275. https://doi.org/10.1111/j.1364-3703.2011.00746.x

Selenium speciation in soil extracts using LC-ICP-MS

A - Papers appearing in refereed journals
Stroud, J. L., McGrath, S. P. and Zhao, F-J. 2012. Selenium speciation in soil extracts using LC-ICP-MS. International Journal Of Environmental Analytical Chemistry. 92, pp. 222-236. https://doi.org/10.1080/03067310903111661

In vitro screening for putative psoriasis-specific antigens among wheat proteins and peptides

A - Papers appearing in refereed journals
Skavland, J., Shewry, P. R., Marsh, J., Geisner, B. and Marcusson, J. A. 2012. In vitro screening for putative psoriasis-specific antigens among wheat proteins and peptides. British Journal Of Dermatology. 166 (1), pp. 67-73. https://doi.org/10.1111/j.1365-2133.2011.10608.x

The role of delta6-desaturase acyl-carrier specificity in the efficient synthesis of long-chain polyunsaturated fatty acids in transgenic plants

A - Papers appearing in refereed journals
Sayanova, O. V., Ruiz-Lopez, N., Haslam, R. P. and Napier, J. A. 2012. The role of delta6-desaturase acyl-carrier specificity in the efficient synthesis of long-chain polyunsaturated fatty acids in transgenic plants. Plant Biotechnology Journal. 10 (2), pp. 195-206. https://doi.org/10.1111/j.1467-7652.2011.00653.x

Truncated Levy walks are expected beyond the scale of data collection when correlated random walks embody observed movement patterns

A - Papers appearing in refereed journals
Reynolds, A. M. 2012. Truncated Levy walks are expected beyond the scale of data collection when correlated random walks embody observed movement patterns. Journal of the Royal Society Interface. 9, pp. 528-534. https://doi.org/10.1098/rsif.2011.0363

Development and validation of a Lagrangian probability density function model of horizontally-homogeneous turbulence within and above plant canopies

A - Papers appearing in refereed journals
Reynolds, A. M. 2012. Development and validation of a Lagrangian probability density function model of horizontally-homogeneous turbulence within and above plant canopies. Boundary-Layer Meteorology. 142, pp. 193-205. https://doi.org/10.1007/s10546-011-9666-5

Cell walls of developing wheat starchy endosperm: comparison of composition and RNA-Seq transcriptome

A - Papers appearing in refereed journals
Pellny, T. K., Lovegrove, A., Freeman, J., Tosi, P., Love, C. G., Knox, J. P., Shewry, P. R. and Mitchell, R. A. C. 2012. Cell walls of developing wheat starchy endosperm: comparison of composition and RNA-Seq transcriptome. Plant Physiology. 158, pp. 612-627. https://doi.org/10.1104/pp.111.189191

Pasteuria endospores from Heterodera cajani (Nematoda: Heteroderidae) exhibit inverted attachment and altered germination in cross-infection studies with Globodera pallida (Nematoda: Heteroderidae)

A - Papers appearing in refereed journals
Mohan, S., Mauchline, T. H., Rowe, J., Hirsch, P. R. and Davies, K. G. 2012. Pasteuria endospores from Heterodera cajani (Nematoda: Heteroderidae) exhibit inverted attachment and altered germination in cross-infection studies with Globodera pallida (Nematoda: Heteroderidae). FEMS Microbiology Ecology. 79 (3), pp. 675-684. https://doi.org/10.1111/j.1574-6941.2011.01249.x

Expression of chemosensory proteins in the tsetse fly Glossina morsitans morsitans is related to female host-seeking behaviour

A - Papers appearing in refereed journals
Liu, R., He, X., Lehane, S., Lehane, M., Hertz-Fowler, C., Berriman, M., Field, L. M. and Zhou, J-J. 2012. Expression of chemosensory proteins in the tsetse fly Glossina morsitans morsitans is related to female host-seeking behaviour. Insect Molecular Biology. 21 (1), pp. 41-48. https://doi.org/10.1111/j.1365-2583.2011.01114.x

Investigating the potential of selected natural compounds to increase the potency of pyrethrum against houseflies Musca domestica (Diptera: Muscidae)

A - Papers appearing in refereed journals
Joffe, T., Gunning, R. V., Allen, G. R., Kristensen, M., Alptekin, S., Field, L. M. and Moores, G. D. 2012. Investigating the potential of selected natural compounds to increase the potency of pyrethrum against houseflies Musca domestica (Diptera: Muscidae). Pest Management Science. 68 (2), pp. 178-184. https://doi.org/10.1002/ps.2241

Effect of long-term equilibration on the toxicity of molybdenum to soil organisms

A - Papers appearing in refereed journals
Van Gestel, C. A. M., McGrath, S. P., Smolders, E., Diez Ortiz, M., Borgman, E., Verweij, R. A., Buekers, J. and Oorts, K. 2012. Effect of long-term equilibration on the toxicity of molybdenum to soil organisms. Environmental Pollution. 162, pp. 1-7. https://doi.org/10.1016/j.envpol.2011.10.013

Evolutionary relationships and functional diversity of plant sulfate transporters

A - Papers appearing in refereed journals
Takahashi, H., Buchner, P. H., Yoshimoto, N., Hawkesford, M. J. and Shiu, S-H. 2012. Evolutionary relationships and functional diversity of plant sulfate transporters. Frontiers in Plant Science. 2, p. 119 (9pp). https://doi.org/10.3389/fpls.2011.00119

A dual-targeted purple acid phosphatase in Arabidopsis thaliana moderates carbon metabolism and its overexpression leads to faster plant growth and higher seed yield

A - Papers appearing in refereed journals
Sun, F., Suen, P. K., Zhang, Y., Liang, C., Carrie, C., Whelan, J., Ward, J. L., Hawkins, N. D., Jiang, L. and Lim, B. L. 2012. A dual-targeted purple acid phosphatase in Arabidopsis thaliana moderates carbon metabolism and its overexpression leads to faster plant growth and higher seed yield. New Phytologist. 194 (1), pp. 206-219. https://doi.org/10.1111/j.1469-8137.2011.04026.x

The potential to increase soil carbon stocks through reduced tillage or organic material additions in England and Wales: a case study

A - Papers appearing in refereed journals
Powlson, D. S., Bhogal, A., Chambers, B. J., Coleman, K., Macdonald, A. J., Goulding, K. W. T. and Whitmore, A. P. 2012. The potential to increase soil carbon stocks through reduced tillage or organic material additions in England and Wales: a case study. Agriculture, Ecosystems & Environment. 146, pp. 23-33. https://doi.org/10.1016/j.agee.2011.10.004

David Stewart Jenkinson FRS: 25th February 1928–16th February 2011

G - Articles in popular magazines and other technical publications
Powlson, D. S. and Brookes, P. C. 2012. David Stewart Jenkinson FRS: 25th February 1928–16th February 2011. Soil Biology and Biochemistry. 44, pp. 152-156. https://doi.org/10.1016/j.soilbio.2011.11.001

Variation in grain arsenic assessed in a diverse panel of rice (Oryza sativa) grown in multiple sites

A - Papers appearing in refereed journals
Norton, G. J., Pinson, S. R. M., Alexander, J., Mckay, S., Hansen, H., Duan, G-L., Islam, M. R., Islam, S., Stroud, J. L., Zhao, F-J., McGrath, S. P., Zhu, Y-G., Lahner, B., Yakubova, E., Guerinot, M. L., Tarpley, L., Eizenga, G. C., Salt, D. E., Meharg, A. A. and Price, A. H. 2012. Variation in grain arsenic assessed in a diverse panel of rice (Oryza sativa) grown in multiple sites. New Phytologist. 193 (3), pp. 650-664. https://doi.org/10.1111/j.1469-8137.2011.03983.x

Methylated arsenic species in plants originate from soil microorganisms

A - Papers appearing in refereed journals
Lomax, C., Liu, W-J., Wu, Liyou, Xue, K., Xiong, J., Zhou, J., McGrath, S. P., Meharg, A. A., Miller, A. J. and Zhao, F-J. 2012. Methylated arsenic species in plants originate from soil microorganisms. New Phytologist. 193 (3), pp. 665-672. https://doi.org/10.1111/j.1469-8137.2011.03956.x

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