Rothamsted Research

Title	Rothamsted Research
Type	Institute

Outputs

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Ketocarotenoid production in tomato triggers metabolic reprogramming and cellular adaptation: The quest for homeostasis

A - Papers appearing in refereed journals

Nogueira, M., Enfissi, E. M. A., Price, E. J., Menard, G. N., Venter, E., Eastmond, P. J., Bar, E., Lewinsohn, E. and Fraser, P. D. 2023. Ketocarotenoid production in tomato triggers metabolic reprogramming and cellular adaptation: The quest for homeostasis. Plant Biotechnology Journal. 22 (2), pp. 427-444. https://doi.org/10.1111/pbi.14196

A study on L-threonine and L-serine uptake in Escherichia coli K-12

A - Papers appearing in refereed journals

Khozov, A. A., Bubnov, D. M., Plisov, E. D., Vybornaya, T. V., Yuzbashev, T., Agrimi, G., Messina, E., Stepanova, A. A., Kudina, M. D., Alekseeva, N. V., Netrusov, A. I. and Sineoky, S. P. 2023. A study on L-threonine and L-serine uptake in Escherichia coli K-12. Frontiers in Microbiology. 14, p. 1151716. https://doi.org/10.3389/fmicb.2023.1151716

Large-scale bioproduction of natural astaxanthin in Yarrowia lipolytica

A - Papers appearing in refereed journals

Yuzbasheva, E. Y., Taratynova, M. O., Fedyaeva, I. M., Dementev, D. A., Korobov, V. S., Fedorov, A. S., Vidal, L. S., Yuzbashev, T., Sineoky, S. P. and Mikheev, M. 2023. Large-scale bioproduction of natural astaxanthin in Yarrowia lipolytica. Bioresource Technology. 21, p. 101289. https://doi.org/10.1016/j.biteb.2022.101289

Remote sensing of the Earth's soil color in space and time

A - Papers appearing in refereed journals

Rizzo, R., Wadoux, A. M., Dematte, J. A., Minasny, B., Barron, V., Ben-Dor, E., Francos, N., Savin, I., Poppiel, R., Silvero, N. E., Terra, F. D. S., Rosin, N. A., Rosas, J. T. F., Greschuk, L. T., Ballester, M. V., Gomez, A. M. R., Belllinaso, H., Safanelli, J. L., Chabrillat, S., Fiorio, P. R., Das, B. S., Malone, B. P., Zalidis, G., Tziolas, N., Tsakiridis, N., Karyotis, K., Samarinas, N., Kalopesa, E., Gholizadeh, A., Shepherd, K., Milewski, R., Vaudour, E., Wang, C. and Salama, E. S. M. 2023. Remote sensing of the Earth's soil color in space and time. Remote Sensing of Environment. 299 (15 December), p. 113845. https://doi.org/10.1016/j.rse.2023.113845

Eddy covariance fluxes over managed ecosystems extrapolated to field scales at fine spatial resolutions

A - Papers appearing in refereed journals

Zhu, S., Olde, L., Lewis, K., Quaife, T., Cardenas, L. M., Loick, N., Xu, J. and Hill, T. 2023. Eddy covariance fluxes over managed ecosystems extrapolated to field scales at fine spatial resolutions. Agricultural and Forest Meteorology. 342 (15 November), p. 109675. https://doi.org/10.1016/j.agrformet.2023.109675

High canopy photosynthesis before anthesis explains the outstanding yield performance of rice cultivars with ideal plant architecture

A - Papers appearing in refereed journals

Cheng, Y., Xiao, F., Huang, D., Yang, Y., Cheng, W., Jin, S., Li, G., Ding, Y., Paul, M. J. and Liu, Z. 2023. High canopy photosynthesis before anthesis explains the outstanding yield performance of rice cultivars with ideal plant architecture. Field Crops Research. 306, p. 109223. https://doi.org/10.1016/j.fcr.2023.109223

How does grazing pressure affect feed intake and behavior of livestock in a meadow steppe in northern China and their coupling relationship

A - Papers appearing in refereed journals

Yu, T., Yan, R., Zhang, C., Chen, S., Zhang, Z., Guo, L., Hu, T., Jiang, C., Wang, M., Bai, K., Zhou, W. and Wu, L. 2023. How does grazing pressure affect feed intake and behavior of livestock in a meadow steppe in northern China and their coupling relationship. Science of the Total Environment. 908 (15 Jan), p. 168472. https://doi.org/10.1016/j.scitotenv.2023.168472

Chemical cues from beetle larvae trigger proliferation and virulence of a plant pathogen

A - Papers appearing in refereed journals

Cambon, M., Thomas, G., Caulfield, J. C., Crampton, M., Doonan, J. M., Hussain, U., Denman, S., Vuts, J. and McDonald, J. E. 2023. Chemical cues from beetle larvae trigger proliferation and virulence of a plant pathogen. bioRxiv. https://doi.org/10.1101/2023.11.21.568124

A multiplex approach of MS, 1D-, and 2D-NMR metabolomicsin plant ontogeny A case study on Clusia minor L. organs (leaf, flower, fruit, and seed)

A - Papers appearing in refereed journals

Noleto-Dias, C., Farag, M. A., Porzel, A., Tavares, J. F. and Wessjohann, L. A. 2023. A multiplex approach of MS, 1D-, and 2D-NMR metabolomicsin plant ontogeny A case study on Clusia minor L. organs (leaf, flower, fruit, and seed). Phytochemical Analysis. https://doi.org/10.1002/pca.3300

Freshwater invertebrate responses to fine sediment stress A multi-continent perspective

A - Papers appearing in refereed journals

McKenzie, M., Brooks, A., Callisto, M., Collins, A. L., Durkota, J. M., Death, R. G., Iwan Jones, J., Linares, M. S., Matthaei, C. D., Monk, W. A., Murphy, J. A., Wagenhoff, A., Wilkes, M., Wood, P. J. and Mathers, K. L. 2023. Freshwater invertebrate responses to fine sediment stress A multi-continent perspective. Global Change Biology. 30 (1), p. e17084. https://doi.org/10.1111/gcb.17084

Climate change mitigation through soil carbon sequestration in working lands: A reality check

A - Papers appearing in refereed journals

Moinet, G. Y. K., Amundson, R., Galdos, M. V., Grace, P. R., Haefele, S. M., Hijbeek, R., Groenigen, J. W. V., Groenigen, K. J. V. and Powlson, D. S. 2023. Climate change mitigation through soil carbon sequestration in working lands: A reality check. Global Change Biology. 30 (1), p. e17010. https://doi.org/10.1111/gcb.17010

Biochar amendments to tropical paddy soil increase rice yields and decrease N2O emissions by modifying the genes involved in nitrogen cycling

A - Papers appearing in refereed journals

Shen, Q., Wang, H., Lazcano, C., Voroney, P., Elrys, A., Gou, G., Li, H., Zhu, Q., Chen, Y., Wu, Y., Meng, L. and Brookes, P. C. 2023. Biochar amendments to tropical paddy soil increase rice yields and decrease N2O emissions by modifying the genes involved in nitrogen cycling. Soil & Tillage Research. 235, p. 105917. https://doi.org/10.1016/j.still.2023.105917

Genomics of predictive radiation mutagenesis in oilseed rape: modifying seed oil composition.

A - Papers appearing in refereed journals

Havlickova, L., He, Z., Berger, M., Wang, L., Sandmann, G., Chew, Y. P., Yoshikawa, G. V., Lu, G., Hu, Q., Banga, S. S., Beaudoin, F. and Bancroft, I. 2023. Genomics of predictive radiation mutagenesis in oilseed rape: modifying seed oil composition. Plant Biotechnology Journal. 22 (3), pp. 738-750. https://doi.org/10.1111/pbi.14220

Smallholder farmer resilience to extreme weather events in a global food value chain

A - Papers appearing in refereed journals

Thompson, W. J., Varma, V., Joerin, J., Bonilla-Duarte, S., Bebber, D. P., Blaser-Hart, W., Kopainsky, B., Spath, L., Curcio, B., Six, J. and Krutli, P. 2023. Smallholder farmer resilience to extreme weather events in a global food value chain. Climatic Change. 176, p. 152. https://doi.org/10.1007/s10584-023-03586-1

Integrating Association Mapping, Linkage Mapping, Fine Mapping with RNA Seq Conferring Seedling Vigor Improvement for Successful Crop Establishment in Deep Sown Direct-Seeded Rice

A - Papers appearing in refereed journals

Sandhu, N., Ankush, A. P., Singh, J., Raigar, O. P., Bains, S., Jindal, T., Singh, M. P., Sethi, M., Pruthi, G., Augustine, G., Verma, V. K., Goyal, S., Kumar, A., Panwar, H., Sihag, M. K., Kaur, R., Kurup, S. and Kumar, A. 2023. Integrating Association Mapping, Linkage Mapping, Fine Mapping with RNA Seq Conferring Seedling Vigor Improvement for Successful Crop Establishment in Deep Sown Direct-Seeded Rice. Rice. 16, p. 46. https://doi.org/10.1186/s12284-023-00665-w

Modeling the spatial-spectral characteristics of plants for nutrient status identification using hyperspectral data and deep learning methods

A - Papers appearing in refereed journals

Okyere, F., Cudjoe, D., Sadeghi-Tehran, P., Virlet, N., Riche, A. B., Castle, M., Greche, L., Simms, D., Mhada, M., Mohareb, F. and Hawkesford, M. J. 2023. Modeling the spatial-spectral characteristics of plants for nutrient status identification using hyperspectral data and deep learning methods. Frontiers in Plant Science. 14, p. 1209500. https://doi.org/10.3389/fpls.2023.1209500

One Hundred Priority Questions for the Development of Sustainable Food Systems in Sub-Saharan Africa

A - Papers appearing in refereed journals

Devenish, A. J. M., Schmitter, P., Jellason, N. P., Esmail, N., Abdi, N. M., Adanu, S. K., Adolph, B., Al-Zu’bi, M., Amali, A. A., Barron, J., Chapman, A. S. A., Chausson, A. M., Chibesa, M., Davies, J., Dugan, E., Edwards, G. I., Egeru, A., Gebrehiwot, T., Griffiths, G. H., Haile, A., Hunga, H. G., Igbine, L., Jarju, O. M., Keya, F., Khalifa, M., Ledoux, W. A., Lejissa, L. T., Loupa, P., Lwanga, J., Mapedza, E. D., Marchant, R., McLoud, T., Mukuyu, P., Musah, L. M., Mwanza, M., Mwitwa, J., Neina, D., Newbold, T., Njogo, S., Robinson, E. J. Z., Singini, W., Umar, B. B., Wesonga, F., Willcock, S., Yang, J. and Tobias, J. A. 2023. One Hundred Priority Questions for the Development of Sustainable Food Systems in Sub-Saharan Africa. Land. 12 (10), p. 1879. https://doi.org/10.3390/land12101879

Dietary selenium intake among Ethiopian children in areas known for selenium spatial variability

A - Papers appearing in refereed journals

Hailu, K., Joy, E., Ferguson, E. L., Bailey, E. H., Wilson, L., Davis, K., Broadley, M. and Gashu, D. 2023. Dietary selenium intake among Ethiopian children in areas known for selenium spatial variability. Frontiers in Nutrition. 10, p. 1250002. https://doi.org/10.3389/fnut.2023.1250002

Increasing fibre in white flour and bread: Implications for health and processing

A - Papers appearing in refereed journals

Shewry, P. R., Joy, E., Segovia De La Revilla, L., Hansen, A., Brennan, J. and Lovegrove, A. 2023. Increasing fibre in white flour and bread: Implications for health and processing. Nutrition Bulletin. 48 (4), pp. 587-593. https://doi.org/10.1111/nbu.12648

The effect of expectancy versus actual gluten intake on gastrointestinal and extra-intestinal symptoms in non-coeliac gluten sensitivity - a randomised, double-blind, placebo-controlled, international, multicentre study

A - Papers appearing in refereed journals

De Graaf, M. C. G., Lawton, C. L., Croden, F., Smolinska, A., Winkens, B., Hesselink, M. A. M., Van Rooy, G., Weegels, P. L., Shewry, P. R., Houghton, L. A., Witteman, B. J. M., Keszthelyi, D., Brouns, F. J. P. H., Dye, L. and Jonkers, D. M. A. E. 2023. The effect of expectancy versus actual gluten intake on gastrointestinal and extra-intestinal symptoms in non-coeliac gluten sensitivity - a randomised, double-blind, placebo-controlled, international, multicentre study. Lancet Gastroenterology and Hepatology. 9 (2), pp. 110-123. https://doi.org/10.1016/S2468-1253(23)00317-5

The three-peat challenge: business as usual, responsible agriculture, and conservation and restoration as management trajectories in global peatlands

A - Papers appearing in refereed journals

Girkin, N. T., Burgess, P. J., Cole, L., Cooper, H., Coronadc, E. H., Davidson, S. J., Hannam, J., Harris, J., Holman, I., McCloskey, C. S., McKeown, M. M., Milner, A. M., Page, S., Smith, J. and Young, D. 2023. The three-peat challenge: business as usual, responsible agriculture, and conservation and restoration as management trajectories in global peatlands. Carbon Management. 14 (1), p. 2275578. https://doi.org/10.1080/17583004.2023.2275578

Landscape and Micronutrient Fertilizer Effect on Agro-Fortified Wheat and Teff Grain Nutrient Concentration in Western Amhara.

A - Papers appearing in refereed journals

Kangara, G., Amede, T., Bailey, E. H., Wilson, L., Mossa, A. W., Tirfessa, D., Desta, M. K., Asrat, T. G., Agegnehu, G., Sida, T. S., Desta, G., Amare, T., Alemayehu, B., Haefele, S. M., Lark, R. M., Broadley, M. and Gameda, S. 2023. Landscape and Micronutrient Fertilizer Effect on Agro-Fortified Wheat and Teff Grain Nutrient Concentration in Western Amhara. Agronomy. 13 (10), p. 2598. https://doi.org/10.3390/agronomy13102598

Soil structure has a greater effect on the rooting of wheat (Triticum aestivum L.) than nitrogen fertilisation rate or genotype.

A - Papers appearing in refereed journals

Mawodza, T., Zhou, H., Atkinson, B. S., Atkinson, J. A., Sturrock, C. J., Riche, A. B., Whalley, W. R., Hawkesford, M. J., Cooper, H. V. and Mooney, S. J. 2023. Soil structure has a greater effect on the rooting of wheat (Triticum aestivum L.) than nitrogen fertilisation rate or genotype. Rhizosphere. 27 (Sept), p. 100770. https://doi.org/10.1016/j.rhisph.2023.100770

In Memoriam Philip John White (1960–2023)

A - Papers appearing in refereed journals

Broadley, M. 2023. In Memoriam Philip John White (1960–2023). Plant and Soil. 493, pp. 1-5. https://doi.org/10.1007/s11104-023-06288-w

A review of sources of resistance to turnip yellows virus (TuYV) in Brassica species

A - Papers appearing in refereed journals

Macleod, K., Greer, S. F., Bramham, L., Pimenta, R. J. G., Nellist, C. F., Hackenburg, D., Teakle, G. R., Barker, G. C. and Walsh, J. A. 2023. A review of sources of resistance to turnip yellows virus (TuYV) in Brassica species. Annals of Applied Biology. 183 (3), pp. 200-208. https://doi.org/10.1111/aab.12842

Influence of soil drying followed by flooding on micronutrient solubilization

A - Papers appearing in refereed journals

Khan, S. U., Hooda, P. S., Blackwell, M. S. A. and Busquets, R. 2023. Influence of soil drying followed by flooding on micronutrient solubilization. Soil Use and Management. 40 (1), p. e12946. https://doi.org/10.1111/sum.12946

Root exudation of organic acid anions and recruitment of beneficial actinobacteria facilitate phosphorus uptake by maize in compacted silt loam soil

A - Papers appearing in refereed journals

Zhang, F., Hou, Y., Zed, R., Mauchline, T. H., Shen, J., Zhang, F. and Jin, K. 2023. Root exudation of organic acid anions and recruitment of beneficial actinobacteria facilitate phosphorus uptake by maize in compacted silt loam soil. Soil Biology and Biochemistry. 184 (Sept), p. 109074. https://doi.org/10.1016/j.soilbio.2023.109074

Greenhouse gas and ammonia emission mitigation priorities for UK policy targets

A - Papers appearing in refereed journals

Buckingham, S., Topp, C. F. E., Smith, P., Eory, V., Chadwick, D. R., Baxter, C. K., Cloy, J. M., Connolly, S., Cooledge, E. C., Cowan, N. J., Drewer, J., Duffy, C., Fox, N. J., Jebari, A., Jenkins, B., Krol, D. J., Marsden, K. A., Mcauliffe, G., Morrison, S. J., O'Flaherty, V., Ramsey, R., Richards, K. G., Roehe, R., Smith, J., Smith, K., Takahashi, T., Thorman, R. E., Williams, J., Wiltshire, J. and Rees, R. M. 2023. Greenhouse gas and ammonia emission mitigation priorities for UK policy targets. Frontiers of Agricultural Science and Engineering - FASE. 10 (2), pp. 268-280. https://doi.org/10.15302/J-FASE-2023495

Insights in disease management - Editorial

A - Papers appearing in refereed journals

West, J. S., Spadaro, D. and Hofte, M. 2023. Insights in disease management - Editorial. Frontiers in Agronomy. 5, p. 1155058. https://doi.org/10.3389/fagro.2023.1155058

The impact of feeding supplemental minerals to sheep on the return of micronutrients to pasture via urine and faeces

A - Papers appearing in refereed journals

Kao, P-T., Fleming, H. R., Warren, H., Darch, T., McGrath, S. P., Buss, H. L. and Lee, M. R. F. 2023. The impact of feeding supplemental minerals to sheep on the return of micronutrients to pasture via urine and faeces. Scientific Reports. 13, p. 2747. https://doi.org/10.1038/s41598-023-29717-3

Microbial Catabolic Activity: Methods, Pertinence, and Potential Interest for Improving Microbial Inoculant Efficiency

A - Papers appearing in refereed journals

Ndour, P. M. S., Bargaz, A., Rchiad, Z., Pawlett, M., Clark, I. M., Mauchline, T. H., Harris, J. and Lyamlouli, K. 2023. Microbial Catabolic Activity: Methods, Pertinence, and Potential Interest for Improving Microbial Inoculant Efficiency. Microbial Ecology. 86, pp. 2211-2230. https://doi.org/10.1007/s00248-023-02250-6

Comparison of the impact of two key fungal signalling pathways on Zymoseptoria tritici infection reveals divergent contribution to invasive growth through distinct regulation of infection-associated genes

A - Papers appearing in refereed journals

Child, H. T., Deeks, M. J., Rudd, J. J. and Bates, S. 2023. Comparison of the impact of two key fungal signalling pathways on Zymoseptoria tritici infection reveals divergent contribution to invasive growth through distinct regulation of infection-associated genes. Molecular Plant Pathology. 24 (10), pp. 1220-1237. https://doi.org/10.1111/mpp.13365

Environmental and economic assessment of waste collection and transportation using LCA: A case study

A - Papers appearing in refereed journals

Aryan, Y., Kumar, A., Subham, and Samadder, S. R. 2023. Environmental and economic assessment of waste collection and transportation using LCA: A case study. Environmental Research. 231 (2), p. 116108. https://doi.org/10.1016/j.envres.2023.116108

Sugar Beet Cultivation in the Tropics and Subtropics:Challenges and Opportunities

A - Papers appearing in refereed journals

Tayyab, M., Wakeel, A., Mubarak, M. U., Artyszak, A., Ali, S., Hakki, E. E., Mahmood, K., Song, B. and Ishfaq, M. 2023. Sugar Beet Cultivation in the Tropics and Subtropics:Challenges and Opportunities. Agronomy. 13 (5), p. agronomy13051213. https://doi.org/10.3390/agronomy13051213

Using qPCR and microscopy to assess the impact of harvesting and weather conditions on the relationship between Alternaria alternata and Alternaria spp. spores in rural and urban atmospheres

A - Papers appearing in refereed journals

Apangu, G., Frisk, C. A., Adams‑Groom, B., Petch, G. M., Hanson, M. and Skjoth, C. A. 2023. Using qPCR and microscopy to assess the impact of harvesting and weather conditions on the relationship between Alternaria alternata and Alternaria spp. spores in rural and urban atmospheres. International Journal Of Biometeorology. 67, pp. 1007-1093. https://doi.org/10.1007/s00484-023-02480-w

Mosquito swarms shear harden

A - Papers appearing in refereed journals

Reynolds, A. M. 2023. Mosquito swarms shear harden. European Physical Journal E. 46, p. 126. https://doi.org/10.1140/epje/s10189-023-00379-3

Nitrogen fertilization produces divergent effects on canopy structure between indica and japonica rice reflected in leaf to panicle ratio based on deep learning

A - Papers appearing in refereed journals

Yang, Z., Qi, X., Dai, Y., Wang, Y., Xiao, F., Ni, J., Jin, S., Li, G., Ding, Y., Paul, M. J. and Liu, Z. 2023. Nitrogen fertilization produces divergent effects on canopy structure between indica and japonica rice reflected in leaf to panicle ratio based on deep learning. Field Crops Research. 304 (DEC), p. 109184. https://doi.org/10.1016/j.fcr.2023.109184

Multiscale spatially varying coefficient modelling using a Geographical Gaussian Process GAM

A - Papers appearing in refereed journals

Comber, A, Harris, P. and Brunsdon, C 2023. Multiscale spatially varying coefficient modelling using a Geographical Gaussian Process GAM. International Journal Of Geographical Information Science. 38 (1), pp. 27-47. https://doi.org/10.1080/13658816.2023.2270285

Herbicide resistance in Alopecurus myosuroides: the value of routine testing of seed samples submitted by farmers since 1985

A - Papers appearing in refereed journals

Cook, S. K., Tatnel, L. V., Moss, S., Hull, R. I., Garthwaite, D. and Dyer, C. 2023. Herbicide resistance in Alopecurus myosuroides: the value of routine testing of seed samples submitted by farmers since 1985. Weed Research. 63 (6), pp. 339-347. https://doi.org/10.1111/wre.12598

Field phenotyping for African crops: overview and perspectives

A - Papers appearing in refereed journals

Cudjoe, D., Virlet, N., Castle, M., Riche, A. B., Mhada, M., Waine, T. W., Mohareb, F. and Hawkesford, M. J. 2023. Field phenotyping for African crops: overview and perspectives. Frontiers in Plant Science. 14, p. 1219673. https://doi.org/10.3389/fpls.2023.1219673

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