Rothamsted Research

TitleRothamsted Research
TypeInstitute

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Characterization of a Wheat Breeders’ Array suitable for high-throughput SNP genotyping of global accessions of hexaploid bread wheat (Triticum aestivum)

A - Papers appearing in refereed journals
Allen, A. M., Winfield, M. O., Burridge, A. J., Downie, R. C., Benbow, H. R., Barker, G. L. A., Wilkinson, P. A., Coghill, J., Waterfall, C., Davassi, A., Scopes, G., Pirani, A., Webster, T., Brew, F., Bloor, C., Griffiths, S., Bentley, A. R., Alda, M., Jack, P., Phillips, A. L. and Edwards, K. J. 2017. Characterization of a Wheat Breeders’ Array suitable for high-throughput SNP genotyping of global accessions of hexaploid bread wheat (Triticum aestivum). Plant Biotechnology Journal. 15 (3), pp. 390-401. https://doi.org/10.1111/pbi.12635

Canopy temperature for simulation of heat stress in irrigated wheat in a semi-arid environment: A multi-model comparison

A - Papers appearing in refereed journals
Webber, H., Martre, P., Asseng, S., Kimball, B. A., White, J., Ottman, M. J., Wall, G. W., De Sanctis, G., Doltra, J., Grant, R., Kassie, B., Maiorano, A., Olesen, J. E., Ripoche, D., Rezaei, E. E., Semenov, M. A., Stratonovitch, P. and Ewert, F. 2017. Canopy temperature for simulation of heat stress in irrigated wheat in a semi-arid environment: A multi-model comparison. Field Crops Research. 202 (15 February), pp. 21-35. https://doi.org/10.1016/j.fcr.2015.10.009

An evaluation of the hysteresis in chemical concentration–discharge (C–Q) relationships from drained, intensively managed grasslands in southwest England

A - Papers appearing in refereed journals
Eludoyin, A. O., Griffith, B., Orr, R. J., Bol, R., Quine, T. A. and Brazier, R. E. 2017. An evaluation of the hysteresis in chemical concentration–discharge (C–Q) relationships from drained, intensively managed grasslands in southwest England. Hydrological Sciences Journal. 62 (8), pp. 1243-1254. https://doi.org/10.1080/02626667.2017.1313979

A Palmitic Acid Elongase Affects Eicosapentaenoic Acid and Plastidial Monogalactosyldiacylglycerol Levels in Nannochloropsis

A - Papers appearing in refereed journals
Dolch, L-J., Rak, C., Perin, G., Tourcier, G., Broughton, R., Leterrier, M., Morosinotto, T., Tellier, F., Faure, J-D., Falconet, D., Jouhet, J., Sayanova, O. V., Beaudoin, F. and Maréchal, E. 2017. A Palmitic Acid Elongase Affects Eicosapentaenoic Acid and Plastidial Monogalactosyldiacylglycerol Levels in Nannochloropsis. Plant Physiology. 173 (1), pp. 742-759. https://doi.org/10.1104/pp.16.01420

A new proteinaceous pathogen-associated molecular pattern (PAMP) identified in Ascomycete fungi induces cell death in Solanaceae

A - Papers appearing in refereed journals
Franco-Orozco, B., Berepiki, A., Ruiz, O., Gamble, L., Griffe, L. L., Wang, S., Birch, P. R. J., Kanyuka, K. and Avrova, A. 2017. A new proteinaceous pathogen-associated molecular pattern (PAMP) identified in Ascomycete fungi induces cell death in Solanaceae. New Phytologist. 214 (4), pp. 1657-1672. https://doi.org/10.1111/nph.14542

Major agricultural changes required to mitigate phosphorus losses under climate change

A - Papers appearing in refereed journals
Ockenden, M. C., Hollaway, M. J., Beven, K. J., Collins, A. L., Evans, R., Falloon, P. D., Forber, K. J., Hiscock, K. M., Kahana, R., Macleod, C. J. A., Tych, W., Villamizar, M. L., Wearing, C., Withers, P. J. A., Zhou, J. G., Barker, P. A., Burke, S., Freer, J. E., Johnes, P. J., Snell, M. A., Surridge, B. W. J. and Haygarth, P. M. 2017. Major agricultural changes required to mitigate phosphorus losses under climate change. Nature Communications. 8 (1), p. 161. https://doi.org/10.1038/s41467-017-00232-0

Lipid remodelling: Unravelling the response to cold stress in Arabidopsis and its extremophile relative Eutrema salsugineum

A - Papers appearing in refereed journals
Barrero-Sicilia, C., Silvestre, S., Haslam, R. P. and Michaelson, L. V. 2017. Lipid remodelling: Unravelling the response to cold stress in Arabidopsis and its extremophile relative Eutrema salsugineum. Plant Science. 263 (October), pp. 194-200. https://doi.org/10.1016/j.plantsci.2017.07.017

Environmental trade-offs of pig production systems under varied operational efficiencies

A - Papers appearing in refereed journals
McAuliffe, G., Takahashi, T., Mogensen, L., Hermansen, J. E., Sage, C. L., Chapman, D. V. and Lee, M. R. F. 2017. Environmental trade-offs of pig production systems under varied operational efficiencies. Journal of Cleaner Production. 165 (1 November), pp. 1163-1173. https://doi.org/10.1016/j.jclepro.2017.07.191

Tailoring seed oil composition in the real world: optimising omega -3 long chain polyunsaturated fatty acid accumulation in transgenic Camelina sativa

A - Papers appearing in refereed journals
Usher, S. L., Han, L., Haslam, R. P., Michaelson, L. V., Sturtevant, D., Aziz, M., Chapman, K. D., Sayanova, O. V. and Napier, J. A. 2017. Tailoring seed oil composition in the real world: optimising omega -3 long chain polyunsaturated fatty acid accumulation in transgenic Camelina sativa. Scientific Reports. 7 (1), p. 6570. https://doi.org/10.1038/s41598-017-06838-0

Manganese toxicity hardly affects sulfur metabolism in Brassica rapa

B - Book chapters etc edited externally
Neves, M. I., Prajapati, D. H., Parmar, S. and Aghajanzadeh, T. A. 2017. Manganese toxicity hardly affects sulfur metabolism in Brassica rapa. in: De Kok, L. J., Hawkesford, M. J., Haneklaus, S. H. and Schnug, E. (ed.) In: Sulfur Metabolism in Higher Plants - Fundamental, Environmental and Agricultural Aspects Springer International Publishing AG. pp. 155-162

Impact of Atmospheric H2S, Salinity and Anoxia on Sulfur Metabolism in Zea mays

B - Book chapters etc edited externally
Ausma, T. and Parmar, S. 2017. Impact of Atmospheric H2S, Salinity and Anoxia on Sulfur Metabolism in Zea mays. in: De Kok, L. J., Hawkesford, M. J., Haneklaus, S. H. and Schnug, E. (ed.) In: Sulfur Metabolism in Higher Plants - Fundamental, Environmental and Agricultural Aspects Springer International Publishing AG. pp. 93-101

Green light for lipid fingerprinting

A - Papers appearing in refereed journals
Haslam, R. P. and Feussner, I. 2017. Green light for lipid fingerprinting. Biochimica et Biophysica Acta (BBA) - Molecular and Cell Biology of Lipids. 1862 (8), pp. 782-785. https://doi.org/10.1016/j.bbalip.2017.04.005

Searching for wheat resistance to aphids and wheat bulb fly in the historical Watkins and Gediflux wheat collections

A - Papers appearing in refereed journals
Aradottir, G. I., Martin, J. L., Clark, S. J., Pickett, J. A. and Smart, L. E. 2017. Searching for wheat resistance to aphids and wheat bulb fly in the historical Watkins and Gediflux wheat collections. Annals of Applied Biology. 170 (2), pp. 179-188. https://doi.org/10.1111/aab.12326

Insects as food and feed: can research and business work together?

A - Papers appearing in refereed journals
Dobermann, D. 2017. Insects as food and feed: can research and business work together? Journal of Insects as Food and Feed. 3 (2), pp. 155-160. https://doi.org/10.3920/jiff2016.0040

Sulfate Transport in Plants: A Personal Perspective

B - Book chapters etc edited externally
Hawkesford, M. J. 2017. Sulfate Transport in Plants: A Personal Perspective. in: De Kok, L. J., Hawkesford, M. J., Haneklaus, S. H. and Schnug, E. (ed.) In: Sulfur Metabolism in Higher Plants - Fundamental, Environmental and Agricultural Aspects Springer International Publishing AG. pp. 3-12

Targeting carbon for crop yield and drought resilience

A - Papers appearing in refereed journals
Griffiths, C. A. and Paul, M. J. 2017. Targeting carbon for crop yield and drought resilience. Journal of the Science of Food and Agriculture. 97 (14), pp. 4663-4671. https://doi.org/10.1002/jsfa.8501

Chlamydomonas carries out fatty acid beta-oxidation in ancestral peroxisomes using a bona fide acyl-CoA oxidase

A - Papers appearing in refereed journals
Kong, F. T., Liang, Y. X., Legeret, B., Beyly-Adriano, A., Blangy, S., Haslam, R. P., Napier, J. A., Beisson, F., Peltier, G. and Li-Beisson, Y. 2017. Chlamydomonas carries out fatty acid beta-oxidation in ancestral peroxisomes using a bona fide acyl-CoA oxidase. The Plant Journal. 90 (2), pp. 358-371. https://doi.org/10.1111/tpj.13498

A curated gluten protein sequence database to support development of proteomics methods for determination of gluten in gluten-free foods

A - Papers appearing in refereed journals
Bromilow, S., Gethings, L. A., Buckley, M., Bromley, M., Shewry, P. R., Langridge, J. I. and Clare Mills, E. N. 2017. A curated gluten protein sequence database to support development of proteomics methods for determination of gluten in gluten-free foods. Journal of Proteomics. 163, pp. 67-75. https://doi.org/10.1016/j.jprot.2017.03.026

A New Approach to Modelling the Relationship Between Annual Population Abundance Indices and Weather Data

A - Papers appearing in refereed journals
Elston, D. A., Brewer, M. J., Martay, B., Johnston, A., Henrys, P. A., Bell, J. R., Harrington, R., Monteith, D. T., Brereton, T. M., Boughey, K. L. and Pearce-Higgins, J. W. 2017. A New Approach to Modelling the Relationship Between Annual Population Abundance Indices and Weather Data. Journal of Agricultural Biological and Environmental Statistics. 22 (4), pp. 427-445. https://doi.org/10.1007/s13253-017-0287-4

Tailoring the composition of novel wax esters in the seeds of transgenic Camelina sativa through systematic metabolic engineering

A - Papers appearing in refereed journals
Ruiz-Lopez, N., Broughton, R., Usher, S. L., Salas, J. J., Haslam, R. P., Napier, J. A. and Beaudoin, F. 2017. Tailoring the composition of novel wax esters in the seeds of transgenic Camelina sativa through systematic metabolic engineering. Plant Biotechnology Journal. 15 (7), pp. 837-849. https://doi.org/10.1111/pbi.12679

Modulation of lipid biosynthesis by stress in diatoms

A - Papers appearing in refereed journals
Sayanova, O. V., Mimouni, V., Ulmann, L., Morant-Manceau, A., Pasquet, V., Schoefs, B. and Napier, J. A. 2017. Modulation of lipid biosynthesis by stress in diatoms. Philosophical Transactions of the Royal Society B-Biological Sciences. 372 (1728), pp. 1-14. https://doi.org/10.1098/rstb.2016.0407

Knowledge Discovery in Biological Databases for Revealing Candidate Genes Linked to Complex Phenotypes

A - Papers appearing in refereed journals
Hassani-Pak, K. and Rawlings, C. J. 2017. Knowledge Discovery in Biological Databases for Revealing Candidate Genes Linked to Complex Phenotypes. Journal of Integrative Bioinformatics. 14 (1), pp. 1-9. https://doi.org/10.1515/jib-2016-0002

Identifying circumstances under which high insecticide dose increases or decreases resistance selection

A - Papers appearing in refereed journals
Helps, J., Paveley, N. D. and Van Den Bosch, F. 2017. Identifying circumstances under which high insecticide dose increases or decreases resistance selection. Journal of Theoretical Biology. 428 (7 September), pp. 153-167. https://doi.org/10.1016/j.jtbi.2017.06.007

Can diverse forage mixtures optimise ruminant animal production, resilience and environmental impact?

C1 - Edited contributions to conferences/learned societies
Beaumont, D. A., Dittmann, M. T., Humphries, D. J., Reynolds, C. K., Hunt, J. J., Jones, H. E., Lukac, M., Saunders, K. J., Wu, L. and Misselbrook, T. H. 2017. Can diverse forage mixtures optimise ruminant animal production, resilience and environmental impact? Proceedings of the 19th Symposium of the European Grassland Federation, 7-10 May, Alghero, Italy.. European Grassland Federation (EGF).

Spatiotemporal expression patterns of wheat amino acid transporters reveal their putative roles in nitrogen transport and responses to abiotic stress

A - Papers appearing in refereed journals
Wan, Y., King, R., Mitchell, R. A. C., Hassani-Pak, K. and Hawkesford, M. J. 2017. Spatiotemporal expression patterns of wheat amino acid transporters reveal their putative roles in nitrogen transport and responses to abiotic stress. Scientific Reports. 7 (1), p. 5461. https://doi.org/10.1038/s41598-017-04473-3

The movement of small insects in the convective boundary layer: linking patterns to processes

A - Papers appearing in refereed journals
Wainwright, C. E., Stepanian, P. M., Reynolds, D. R. and Reynolds, A. M. 2017. The movement of small insects in the convective boundary layer: linking patterns to processes. Scientific Reports. 7 (1), p. 5438. https://doi.org/10.1038/s41598-017-04503-0

When the need for change dawns

G - Articles in popular magazines and other technical publications
Dobermann, A. 2017. When the need for change dawns. Farm Business. (10 July).

Data from: Integrating regulatory surveys and citizen science to map outbreaks of forest diseases: acute oak decline in England and Wales

N - Datasets
Brown, N., Van Den Bosch, F., Parnell, S. and Denman, S. 2017. Data from: Integrating regulatory surveys and citizen science to map outbreaks of forest diseases: acute oak decline in England and Wales. Dryad Data Repository. https://doi.org/10.5061/dryad.18157

Sequestering Soil Organic Carbon: A Nitrogen Dilemma

A - Papers appearing in refereed journals
Van Groenigen, J. W., Van Kessel, C., Hungate, B. A., Oenema, O., Powlson, D. S. and Van Groenigen, K. J. 2017. Sequestering Soil Organic Carbon: A Nitrogen Dilemma. Environmental Science & Technology. 51 (9), pp. 4738-4739. https://doi.org/10.1021/acs.est.7b01427

Selenium deficiency risk predicted to increase under future climate change

A - Papers appearing in refereed journals
Jones, G. D., Droz, B., Greve, P., Gottschalk, P., Poffet, D., McGrath, S. P., Seneviratne, S. I., Smith, P. and Winkel, L. H. E. 2017. Selenium deficiency risk predicted to increase under future climate change. Proceedings of the National Academy of Sciences of the United States of America. 114 (11), pp. 2848-2853. https://doi.org/10.1073/pnas.1611576114

Nitrogen losses to the environment following food-based digestate and compost applications to agricultural land

A - Papers appearing in refereed journals
Nicholson, F., Bhogal, A., Cardenas, L. M., Chadwick, D., Misselbrook, T. H., Rollett, A., Taylor, M., Thorman, R. and Williams, J. 2017. Nitrogen losses to the environment following food-based digestate and compost applications to agricultural land. Environmental Pollution. 228, pp. 504-516. https://doi.org/10.1016/j.envpol.2017.05.023

“Hot spots” of N and C impact nitric oxide, nitrous oxide and nitrogen gas emissions from a UK grassland soil

A - Papers appearing in refereed journals
Loick, N., Dixon, E. R., Abalos, D., Vallejo, A., Matthews, G. P., Mcgeough, K., Watson, C. J., Baggs, E. M. and Cardenas, L. M. 2017. “Hot spots” of N and C impact nitric oxide, nitrous oxide and nitrogen gas emissions from a UK grassland soil. Geoderma. 305 (1 November), pp. 336-345. https://doi.org/10.1016/j.geoderma.2017.06.007

Development of a statistical crop model to explain the relationship between seed yield and phenotypic diversity within the Brassica napus genepool

A - Papers appearing in refereed journals
Bennett, E., Brignell, C., Carion, P. W. C., Cook, S. M., Eastmond, P. J., Teakle, G., Hammond, J. P., Love, C., King, G. J., Roberts, J. A. and Wagstaff, C. 2017. Development of a statistical crop model to explain the relationship between seed yield and phenotypic diversity within the Brassica napus genepool. Agronomy. 7 (2), p. 31. https://doi.org/10.3390/agronomy7020031

Plant, soil and microbial controls on grassland diversity restoration: a long-term, multi-site mesocosm experiment

A - Papers appearing in refereed journals
Fry, E. L., Pilgrim, E. S., Tallowin, J. R. B., Smith, R. S., Mortimer, S. R., Beaumont, D. A., Simkin, J., Harris, S. J., Shiel, R. S., Quirk, H., Harrison, K. A., Lawson, C. S., Hobbs, P. J. and Bardgett, R. D. 2017. Plant, soil and microbial controls on grassland diversity restoration: a long-term, multi-site mesocosm experiment. Journal of Applied Ecology. February, pp. 1-11. https://doi.org/10.1111/1365-2664.12869

Mutations on M3 helix of Plutella xylostella glutamate-gated chloride channel confer unequal resistance to abamectin by two different mechanisms

A - Papers appearing in refereed journals
Wang, X., Puinean, A. M., O´reilly, A. O., Williamson, M. S., Smelt, C. L. C., Millar, N. S. and Wu, Y. 2017. Mutations on M3 helix of Plutella xylostella glutamate-gated chloride channel confer unequal resistance to abamectin by two different mechanisms. Insect Biochemistry and Molecular Biology. 86, pp. 50-57. https://doi.org/10.1016/j.ibmb.2017.05.006

Soil texture analysis revisited: Removal of organic matter matters more than ever

A - Papers appearing in refereed journals
Jensen, J. L., Schjonning, P., Watts, C. W., Christensen, B. T. and Munkholm, L. J. 2017. Soil texture analysis revisited: Removal of organic matter matters more than ever. PLOS ONE. 12 (5), p. 10p. https://doi.org/10.1371/journal.pone.0178039

Glycerolipid characterization and nutrient deprivation-associated changes in the green picoalga Ostreococcus tauri

A - Papers appearing in refereed journals
Degraeve-Guilbault, C., Brehelin, C., Haslam, R. P., Sayanova, O. V., Marie-Luce, G., Jouhet, J. and Corellou, F. 2017. Glycerolipid characterization and nutrient deprivation-associated changes in the green picoalga Ostreococcus tauri. Plant Physiology. 173 (4), pp. 2060-2080. https://doi.org/10.1104/pp.16.01467

The effect of nitrification inhibitor on N2O, NO and N2 emissions under different soil moisture levels in a permanent grassland soil

A - Papers appearing in refereed journals
Wu, D., Cardenas, L. M., Calvet, S., Bruggemann, N., Loick, N., Liu, S. and Bol, R. 2017. The effect of nitrification inhibitor on N2O, NO and N2 emissions under different soil moisture levels in a permanent grassland soil. Soil Biology and Biochemistry. 113, pp. 153-160. https://doi.org/10.1016/j.soilbio.2017.06.007

Exploitation of endophytes for sustainable agricultural intensification Exploitation of endophytes

A - Papers appearing in refereed journals
Le Cocq, K., Gurr, S. J., Hirsch, P. R. and Mauchline, T. H. 2017. Exploitation of endophytes for sustainable agricultural intensification Exploitation of endophytes. Molecular Plant Pathology. 18 (3), pp. 469-473. https://doi.org/10.1111/mpp.12483

Defining genetic and chemical diversity in wheat grain by 1H-NMR spectroscopy of polar metabolites

A - Papers appearing in refereed journals
Shewry, P. R., Corol, D. I., Jones, H. D., Beale, M. H. and Ward, J. L. 2017. Defining genetic and chemical diversity in wheat grain by 1H-NMR spectroscopy of polar metabolites. Molecular Nutrition & Food Research. 61 (7), p. 1600807. https://doi.org/10.1002/mnfr.201600807

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