Rothamsted Research

TitleRothamsted Research
TypeInstitute

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Determining the longer term decline in plant-available soil phosphorus from short-term measured values

A - Papers appearing in refereed journals
Johnston, A. E., Poulton, P. R., White, Robin P. and Macdonald, A. J. 2016. Determining the longer term decline in plant-available soil phosphorus from short-term measured values. Soil Use and Management. 32 (2), pp. 151-161. https://doi.org/10.1111/sum.12253

Genome size and ploidy influence angiosperm species' biomass under nitrogen and phosphorus limitation

A - Papers appearing in refereed journals
Guignard, M. S., Nichols, R. A., Knell, R. J., Macdonald, A. J., Romila, C-A., Trimmer, M., Leitch, I. J. and Leitch, A. R. 2016. Genome size and ploidy influence angiosperm species' biomass under nitrogen and phosphorus limitation. New Phytologist. 210 (4), pp. 1195-1206. https://doi.org/10.1111/nph.13881

Food safety: structure and expression of the asparagine synthetase gene family of wheat

A - Papers appearing in refereed journals
Gao, R., Curtis, T. Y., Powers, S. J., Xu, H., Huang, J. and Halford, N. G. 2016. Food safety: structure and expression of the asparagine synthetase gene family of wheat. Journal of Cereal Science. 68, pp. 122-131. https://doi.org/10.1016/j.jcs.2016.01.010

Nitrous oxide emissions from livestock urine and dung

C2 - Non-edited contributions to conferences
Chadwick, D. R., Cardenas, L. M., Donovan, N., Misselbrook, T. H., Williams, J., Thorman, R., Mcgeough, K., Watson, C., Bell, M., Anthony, S. and Rees, R. M. 2016. Nitrous oxide emissions from livestock urine and dung. Abstracts 6th Greenhouse Gas and Animal Agriculture Conference, Melbourne, 14-18 February 2016 .

The contribution of Aspergillus fumigatus stress responses to virulence and antifungal resistance

A - Papers appearing in refereed journals
Brown, N. A. and Goldman, G. H. 2016. The contribution of Aspergillus fumigatus stress responses to virulence and antifungal resistance. Journal of Microbiology. 54, pp. 243-253. https://doi.org/10.1007/s12275-016-5510-4

Unique features of a global human ectoparasite identified through sequencing of the bed bug genome

A - Papers appearing in refereed journals
Benoit, J. B., Zhou, J-J., Aldeman, Z. N., Reinhardt, K., Dolan, A., Poelchau, M., Jennings, E. C., Szuter, E. M., Hagen, R. W., Gujar, H., Shukla, J. N., Zhu, F., Mohan, M., Nelson, D. R., Rosendale, A. J., Derst, C., Resnik, V., Wernig, S., Menegazzi, P., Wegener, C., Peschel, N., Hendershot, J. M., Blenau, W., Predel, R., Johnston, P. R., Ioannidis, P., Waterhouse, R. M., Nauen, R., Schorn, C., Ott, M-C., Maiwald, F., Johnston, J. S., Gondhalekar, A. D., Scharf, M. E., Peterson, B. F. and Raje, K. R. 2016. Unique features of a global human ectoparasite identified through sequencing of the bed bug genome. Nature Communications. 7, p. 10165. https://doi.org/10.1038/ncomms10165

Atmospheric H2S and SO2 as sulfur sources for Brassica juncea and Brassica rapa: regulation of sulfur uptake and assimilation

A - Papers appearing in refereed journals
Aghajanzadeh, T. A., Hawkesford, M. J. and De Kok, L. J. 2016. Atmospheric H2S and SO2 as sulfur sources for Brassica juncea and Brassica rapa: regulation of sulfur uptake and assimilation. Environmental and Experimental Botany. 124, pp. 1-10. https://doi.org/10.1016/j.envexpbot.2015.12.001

Rubisco catalytic properties of wild and domesticated relatives provide scope for improving wheat photosynthesis

A - Papers appearing in refereed journals
Prins, A., Orr, D. J., Andralojc, P. J., Reynolds, M. P., Carmo-Silva, E. and Parry, M. A. J. 2016. Rubisco catalytic properties of wild and domesticated relatives provide scope for improving wheat photosynthesis. Journal of Experimental Botany. 67, pp. 1827-1838. https://doi.org/10.1093/jxb/erv574

PhytoPath: an integrative resource for plant pathogen genomics

A - Papers appearing in refereed journals
Pedro, H., Maheswari, U., Urban, M., Irvine, A. G., Cuzick, A., Mcdowall, M. D., Staines, D. M., Kulesha, E., Hammond-Kosack, K. E. and Kersey, P. J. 2016. PhytoPath: an integrative resource for plant pathogen genomics. Nucleic Acids Research. 44 (D1), pp. D688-D693. https://doi.org/10.1093/nar/gkv1052

Modelling the electrical conductivity of soil in the Yangtze delta in three dimensions

A - Papers appearing in refereed journals
Li, H. Y., Marchant, B. P. and Webster, R. 2016. Modelling the electrical conductivity of soil in the Yangtze delta in three dimensions. Geoderma. 269, pp. 119-125. https://doi.org/10.1016/j.geoderma.2016.01.028

Last-century increases in intrinsic water-use efficiency of grassland communities have occurred over a wide range of vegetation composition, nutrient inputs and soil pH

A - Papers appearing in refereed journals
Kohler, I. H., Macdonald, A. J. and Schnyder, H. 2016. Last-century increases in intrinsic water-use efficiency of grassland communities have occurred over a wide range of vegetation composition, nutrient inputs and soil pH. Plant Physiology. 170, pp. 881-890. https://doi.org/10.1104/pp.15.01472

Planting seeds for the future of food

A - Papers appearing in refereed journals
Green, H., Broun, P., Cakmak, I., Condon, L., Federoff, N., Gonzalez-Valero, J., Graham, I., Lewis, J., Moloney, M., Oniang'o, R. K., Sanginga, N., Shewry, P. R. and Roulin, A. 2016. Planting seeds for the future of food. Journal of the Science of Food and Agriculture. 96 (8), pp. 1409-1414. https://doi.org/10.1002/jsfa.7734

Greenhouse gas emissions from a reseeded grassland on the North Wyke Farm Platform

C2 - Non-edited contributions to conferences
Dunn, R. M., Boden, J., Misselbrook, T. H., Orr, R. J., Griffith, B. A., Neale, J. and Cardenas, L. M. 2016. Greenhouse gas emissions from a reseeded grassland on the North Wyke Farm Platform. Abstracts International Conference on Steps to Sustainable Livestock, Bristol, 12-15 January 2016 .

Greenhouse gas emissions and stocks of soil carbon and nitrogen from a 20-year fertilised wheat-maize intercropping system: a model approach

A - Papers appearing in refereed journals
Zhang, X., Xu, M., Liu, J., Sun, N., Wang, B. and Wu, L. 2016. Greenhouse gas emissions and stocks of soil carbon and nitrogen from a 20-year fertilised wheat-maize intercropping system: a model approach. Journal of Environmental Management. 167 (1 February), pp. 105-114. https://doi.org/10.1016/j.jenvman.2015.11.014

Modelling and predicting crop yield, soil carbon and nitrogen stocks under climate change scenarios with fertiliser management in the North China Plain

A - Papers appearing in refereed journals
Zhang, X., Xu, M., Sun, N., Xiong, W., Huang, S. and Wu, L. 2016. Modelling and predicting crop yield, soil carbon and nitrogen stocks under climate change scenarios with fertiliser management in the North China Plain. Geoderma. 265, pp. 176-186. https://doi.org/10.1016/j.geoderma.2015.11.027

The changing trend in nitrate concentrations in major aquifers due to historical nitrate loading from agricultural land across England and Wales from 1925 to 2150

A - Papers appearing in refereed journals
Wang, L., Stuart, M. E., Lewis, M. A., Ward, R. S., Skirvin, D., Naden, P. S., Collins, A. L. and Ascott, M. J. 2016. The changing trend in nitrate concentrations in major aquifers due to historical nitrate loading from agricultural land across England and Wales from 1925 to 2150. Science of the Total Environment. 542, pp. 694-705. https://doi.org/10.1016/j.scitotenv.2015.10.127

Biochemical characterization of predicted Precambrian RuBisCo

A - Papers appearing in refereed journals
Shih, P. M., Occhialini, A., Cameron, J. C., Andralojc, P. J., Parry, M. A. J. and Kerfeld, C. A. 2016. Biochemical characterization of predicted Precambrian RuBisCo. Nature Communications. 7, p. 10382. https://doi.org/10.1038/ncomms10382

Does fine sediment source as well as quantity affect salmonid embryo mortality and development?

A - Papers appearing in refereed journals
Sear, D. A., Jones, J. I., Collins, A. L., Hulin, A., Burke, N., Bateman, S., Pattison, I. and Naden, P. S. 2016. Does fine sediment source as well as quantity affect salmonid embryo mortality and development? Science of the Total Environment. 541, pp. 957-968. https://doi.org/10.1016/j.scitotenv.2015.09.155

Visualisation of plastid degradation in sperm cells of wheat pollen

A - Papers appearing in refereed journals
Primavesi, L. F., Wu, H., Mudd, E. A., Day, A. and Jones, H. D. 2016. Visualisation of plastid degradation in sperm cells of wheat pollen. Protoplasma. 254 (1), pp. 229-237. https://doi.org/10.1007/s00709-015-0935-x

Transgenic tobacco plants with improved cyanobacterial Rubisco expression but no extra assembly factors grow at near wild-type rates if provided with elevated CO2

A - Papers appearing in refereed journals
Occhialini, A., Lin, M. T., Andralojc, P. J., Hanson, M. R. and Parry, M. A. J. 2016. Transgenic tobacco plants with improved cyanobacterial Rubisco expression but no extra assembly factors grow at near wild-type rates if provided with elevated CO2. The Plant Journal. 85 (1), pp. 148-160. https://doi.org/10.1111/tpj.13098

Designing a sampling scheme to reveal correlations between weeds and soil properties at multiple spatial scales

A - Papers appearing in refereed journals
Metcalfe, H., Milne, A. E., Webster, R., Lark, R. M., Murdoch, A. J. and Storkey, J. 2016. Designing a sampling scheme to reveal correlations between weeds and soil properties at multiple spatial scales. Weed Research. 56 (1), pp. 1-13. https://doi.org/10.1111/wre.12184

A review of the policies and implementation of practices to decrease water quality impairment by phosphorus in New Zealand, the UK and the US

A - Papers appearing in refereed journals
Mcdowell, R. W., Dils, R. M., Collins, A. L., Flahive, K. A., Sharpley, A. N. and Quinn, J. 2016. A review of the policies and implementation of practices to decrease water quality impairment by phosphorus in New Zealand, the UK and the US. Nutrient Cycling in Agroecosystems. 104 (3), pp. 289-305. https://doi.org/10.1007/s10705-015-9727-0

The Minkowski approach for choosing the distance metric in geographically weighted regression

A - Papers appearing in refereed journals
Lu, B., Charlton, M., Brunsdon, C. and Harris, P. 2016. The Minkowski approach for choosing the distance metric in geographically weighted regression. International Journal Of Geographical Information Science. 30 (2), pp. 351-368. https://doi.org/10.1080/13658816.2015.1087001

Using hysteresis analysis of high-resolution water quality monitoring data, including uncertainty, to infer controls on nutrient and sediment transfer in catchments

A - Papers appearing in refereed journals
Lloyd, C. E. M., Freer, J. E., Johnes, P. J. and Collins, A. L. 2016. Using hysteresis analysis of high-resolution water quality monitoring data, including uncertainty, to infer controls on nutrient and sediment transfer in catchments. Science of the Total Environment. 543, pp. 388-404. https://doi.org/10.1016/j.scitotenv.2015.11.028

Stocks and flows of natural and human-derived capital in ecosystem services

A - Papers appearing in refereed journals
Jones, L., Norton, L., Austin, Z., Browne, A. L., Donovan, D., Emmett, B. A., Grabowski, Z. J., Howard, D. C., Jones, J. P. G., Kenter, J. O., Manley, W., Morris, C., Robinson, D. A., Short, C., Siriwardena, G. M., Stevens, C. J., Storkey, J., Waters, R. D. and Willis, G. F. 2016. Stocks and flows of natural and human-derived capital in ecosystem services. Land Use Policy. 52, pp. 151-162. https://doi.org/10.1016/j.landusepol.2015.12.014

Data mining the North Wyke Farm Platform data sets

C2 - Non-edited contributions to conferences
Harris, P., Griffith, B. A., Sint, H. M., Cardenas, L. M., Dungait, J. A. J., Orr, R. J. and Lee, M. R. F. 2016. Data mining the North Wyke Farm Platform data sets. Abstracts International Conference on Steps to Sustainable Livestock, Bristol, 12-15 January 2016 .

Contextualized geographically weighted principal components analysis for investigating baseline soils data on the North Wyke Farm Platform

C1 - Edited contributions to conferences/learned societies
Harris, P., Howden, N. J. K., Peukert, S., Noacco, V., Ramezani, K., Tuominen, E., Eludoyin, B., Brazier, R., Shepherd, A., Griffith, B. A., Orr, R. J. and Murray, P. J. 2016. Contextualized geographically weighted principal components analysis for investigating baseline soils data on the North Wyke Farm Platform. Raju, N. J. (ed.) Geostatistical and Geospatial Approaches for the Characterization of Natural Resources in the Environment: Proceedings 16th Annual Conference of the International Association for Mathematical Geosciences, New Delhi, 17-20 October 2014 . Springer, Cham. pp. 651-655 https://doi.org/10.1007/978-3-319-18663-4_99

Grazing behaviour, urine composition and soil properties are key drivers of nitrous oxide emissions from livestock urine in the uplands (Uplands - N2O)

C2 - Non-edited contributions to conferences
Cardenas, L. M., Perotto-Baldivieso, H., Whellan, M., Wilson, R. and Chadwick, D. R. 2016. Grazing behaviour, urine composition and soil properties are key drivers of nitrous oxide emissions from livestock urine in the uplands (Uplands - N2O). Abstracts International Conference on Steps to Sustainable Livestock, Bristol, 12-15 January 2016 .

The impact of fertilizer management on the oxidation status of terrestrial organic matter

A - Papers appearing in refereed journals
Worrall, F., Clay, G. D. and Macdonald, A. J. 2016. The impact of fertilizer management on the oxidation status of terrestrial organic matter. Soil Use and Management. 32 (1), pp. 45-52. https://doi.org/10.1111/sum.12228

Dry matter losses and greenhouse gas emissions from outside storage of short rotation coppice willow chip

A - Papers appearing in refereed journals
Whittaker, C., Yates, N. E., Powers, S. J., Misselbrook, T. H. and Shield, I. F. 2016. Dry matter losses and greenhouse gas emissions from outside storage of short rotation coppice willow chip. BioEnergy Research. 9, pp. 288-302. https://doi.org/10.1007/s12155-015-9686-y

Changes in large-scale climate alter spatial synchrony of aphid pests

A - Papers appearing in refereed journals
Sheppard, L. W., Bell, J. R., Harrington, R. and Reuman, D. C. 2016. Changes in large-scale climate alter spatial synchrony of aphid pests. Nature Climate Change. 6, pp. 610-613. https://doi.org/10.1038/NCLIMATE2881

Temperature determines size and direction of effects of elevated CO2 and nitrogen form on yield quantity and quality of Chinese cabbage

A - Papers appearing in refereed journals
Reich, M., Van Den Meerakker, A. N., Parmar, S., Hawkesford, M. J. and De Kok, L. J. 2016. Temperature determines size and direction of effects of elevated CO2 and nitrogen form on yield quantity and quality of Chinese cabbage. Plant Biology. 18(Supplement 1), pp. 63-75. https://doi.org/10.1111/plb.12396

Dedicated biomass crops can enhance biodiversity in the arable landscape

A - Papers appearing in refereed journals
Haughton, A. J., Bohan, D. A., Clark, S. J., Mallott, M. D., Mallott, V., Sage, R. and Karp, A. 2016. Dedicated biomass crops can enhance biodiversity in the arable landscape. Global Change Biology. Bioenergy. 8 (6), pp. 1071-1081. https://doi.org/10.1111/gcbb.12312

The trans-kingdom identification of negative regulators of pathogen hypervirulence

A - Papers appearing in refereed journals
Brown, N. A., Urban, M. and Hammond-Kosack, K. E. 2016. The trans-kingdom identification of negative regulators of pathogen hypervirulence. FEMS Microbiology Reviews. 40 (1), pp. 19-40. https://doi.org/10.1093/femsre/fuv042

Technical note: testing an improved index for analysing storm discharge-nutrient hysteresis

A - Papers appearing in refereed journals
Lloyd, C. E. M., Freer, J. E., Johnes, P. J. and Collins, A. L. 2016. Technical note: testing an improved index for analysing storm discharge-nutrient hysteresis. Hydrology And Earth System Sciences. 20 (2), pp. 625-632. https://doi.org/10.5194/hess-20-625-2016

Extent, frequency and rate of water erosion of arable land in Britain - benefits and challenges for modelling

A - Papers appearing in refereed journals
Evans, R., Collins, A. L., Foster, I. D. L., Rickson, R. J., Anthony, S. G., Brewer, T., Deeks, L., Newell-Price, J. P., Truckell, I. G. and Zhang, Y. 2016. Extent, frequency and rate of water erosion of arable land in Britain - benefits and challenges for modelling. Soil Use and Management. 32 (S1), pp. 149-161. https://doi.org/10.1111/sum.12210

Cassava brown streak disease and the sustainability of a clean seed system

A - Papers appearing in refereed journals
McQuaid, C. F., Sseruwagi, P., Pariyo, A. and Van Den Bosch, F. 2016. Cassava brown streak disease and the sustainability of a clean seed system. Plant Pathology. 65 (2), pp. 299-309. https://doi.org/10.1111/ppa.12453

The potential of decision support systems to improve risk assessment for pollen beetle management in winter oilseed rape

A - Papers appearing in refereed journals
Ferguson, A. W., Skellern, M. P., Johnen, A., Von Richthofen, J-S., Watts, N. P., Bardsley, E., Murray, D. A. and Cook, S. M. 2016. The potential of decision support systems to improve risk assessment for pollen beetle management in winter oilseed rape. Pest Management Science. 72 (3), pp. 609-617. https://doi.org/10.1002/ps.4069

1H-NMR screening for the high-throughput determination of genotype and environmental effects on the content of asparagine in wheat grain

A - Papers appearing in refereed journals
Corol, D. I., Ravel, C., Rakszegi, M., Charmet, G., Bedo, Z., Beale, M. H., Shewry, P. R. and Ward, J. L. 2016. 1H-NMR screening for the high-throughput determination of genotype and environmental effects on the content of asparagine in wheat grain. Plant Biotechnology Journal. 14 (1), pp. 128-139. https://doi.org/10.1111/pbi.12364

Field-evolved resistance to imidacloprid and ethiprole in populations of brown planthopper Nilaparvata lugens collected from across South and East Asia

A - Papers appearing in refereed journals
Garrood, W. T., Zimmer, C. T., Gorman, K. J., Nauen, R., Bass, C. and Davies, T. G. E. 2016. Field-evolved resistance to imidacloprid and ethiprole in populations of brown planthopper Nilaparvata lugens collected from across South and East Asia. Pest Management Science. 72 (1), pp. 140-149. https://doi.org/10.1002/ps.3980

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