Sterol content analysis suggests altered eburicol 14alpha-demethylase (CYP51) activity in isolates of Mycosphaerella graminicola adapted to azole fungicides

Bean, T. P., Cools, H. J., Lucas, J. A., Hawkins, N. D., Ward, J. L., Shaw, M. W. and Fraaije, B. A. 2009. Sterol content analysis suggests altered eburicol 14alpha-demethylase (CYP51) activity in isolates of Mycosphaerella graminicola adapted to azole fungicides. FEMS Microbiology Letters. 296, pp. 266-273. https://doi.org/10.1111/j.1574-6968.2009.01645.x

Authors	Bean, T. P., Cools, H. J., Lucas, J. A., Hawkins, N. D., Ward, J. L., Shaw, M. W. and Fraaije, B. A.
Year of Publication	2009
Journal	FEMS Microbiology Letters
Journal citation	296, pp. 266-273
Digital Object Identifier (DOI)	https://doi.org/10.1111/j.1574-6968.2009.01645.x
Open access	Published as bronze (free) open access
Funder project or code	Centre for Sustainable Pest and Disease Management (PDM)
	Project: 4750
	Impact of mutations in the target-encoding CYP51 gene in Mycosphaerella graminicola populations developing resistance to triazole fungicides
Publisher's version	Bean-2009-Sterol-content-analysis-suggests-al.pdf
Publisher	Oxford University Press (OUP)
ISSN	0378-1097

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Oleuropein derivatives from olive fruit extracts reduce α-synuclein fibrillation and oligomer toxicity

A - Papers appearing in refereed journals

Mohammed-Beigi, H., Aliakbari, F., Sahin, C., Lomax, C., Tawfike, A., Shafer, N.P., Amiri-Nowdijeh, A., Eskandari, E., Moller, I.M., Hosseini-Mazinani, M., Christiansen, G., Ward, J. L., Morshedi, D. and Otzen, D.E 2019. Oleuropein derivatives from olive fruit extracts reduce α-synuclein fibrillation and oligomer toxicity. Journal of Biological Chemistry. 294, pp. 4215-4232. https://doi.org/10.1074/jbc.RA118.005723

Dramatic recent changes in the population genetic diversity of avirulence gene AvrStb6 in the pathogenic fungus Zymoseptoria tritici

Conference paper

Stephens, C., Blyth, H., Olmez, F., Turgay, E. B., Chen, H., McDonald, M., Solomon, P., Milgate, A., Fraaije, B. A., Rudd, J. J. and Kanyuka, K. 2019. Dramatic recent changes in the population genetic diversity of avirulence gene AvrStb6 in the pathogenic fungus Zymoseptoria tritici. Molecular Biology of Plant Pathogens (MBPP) Conference. John Innes Centre, Norwich, UK 18 Mar 2019

Impact of epoxiconazole on Fusarium head blight control, grain yield and deoxynivalenol accumulation in wheat

A - Papers appearing in refereed journals

Duan, Y., Xiao, X., Li, T., Chen, W., Wang, J., Fraaije, B. A. and Zhou, M. G. 2018. Impact of epoxiconazole on Fusarium head blight control, grain yield and deoxynivalenol accumulation in wheat. Pesticide Biochemistry and Physiology. 152, pp. 138-147. https://doi.org/10.1016/j.pestbp.2018.09.012

Simultaneous detection of multiple benzimidazole resistant β-tubulin variants of Botrytis cinerea using loop mediated isothermal amplification

A - Papers appearing in refereed journals

Duan, Y., Yang, Y., Wang, J. X., Chen, C. J., Steinberg, G., Fraaije, B. A. and Zhou, M. G. 2018. Simultaneous detection of multiple benzimidazole resistant β-tubulin variants of Botrytis cinerea using loop mediated isothermal amplification. Plant Disease. 102 (10), pp. 2016-2024. https://doi.org/10.1094/PDIS-03-18-0542-RE

Development and application of a simple, rapid and sensitive method for detecting moderately carbendazim‐resistant isolates in Botrytis cinerea

A - Papers appearing in refereed journals

Duan, Y. B., Yang, Y., Li, M. X., Fraaije, B. A. and Zhou, M. G. 2018. Development and application of a simple, rapid and sensitive method for detecting moderately carbendazim‐resistant isolates in Botrytis cinerea. Annals of Applied Biology - AAB. 172 (3), pp. 355-365. https://doi.org/10.1111/aab.12426

Dramatic changes in genetic diversity of the avirulence effector AvrStb6 in global populations of the wheat pathogen Zymoseptoria tritici

Conference poster

Stephens, C., Blyth, H., Olmez, F., McDonald, M., Solomon, P., Milgate, A., Chen, H., Fraaije, B. A., Rudd, J. J. and Kanyuka, K. 2018. Dramatic changes in genetic diversity of the avirulence effector AvrStb6 in global populations of the wheat pathogen Zymoseptoria tritici. British Society of Plant Pathology Presidential Meeting, Warwick 2018. Warwick University 10 Dec 2018 https://doi.org/N/A

Non‐target site SDHI resistance is present as standing genetic variation in field populations of Zymoseptoria tritici

A - Papers appearing in refereed journals

Yamashita, M. and Fraaije, B. A. 2018. Non‐target site SDHI resistance is present as standing genetic variation in field populations of Zymoseptoria tritici. Pest Management Science. 74 (3), pp. 672-681. https://doi.org/10.1002/ps.4761

Loop-mediated isothermal amplification (LAMP) assays for rapid detection of Pyrenopeziza brassicae (light leaf spot of brassicas)

A - Papers appearing in refereed journals

King, K. M., Krivova, V., Canning, G. G. M., Hawkins, N. J., Kaczmarek, A. M., Perryman, S. A. M., Dyer, P. S., Fraaije, B. A. and West, J. S. 2018. Loop-mediated isothermal amplification (LAMP) assays for rapid detection of Pyrenopeziza brassicae (light leaf spot of brassicas). Plant Pathology. 67 (1), pp. 167-174. https://doi.org/10.1111/ppa.12717

Changes in field dose–response curves for demethylation inhibitor (DMI) and quinone outside inhibitor (QoI) fungicides against Zymoseptoria tritici, related to laboratory sensitivity phenotyping and genotyping assays

A - Papers appearing in refereed journals

Blake, J. J., Gosling, P., Fraaije, B. A., Burnett, F. J., Knight, S. M., Kildea, S. and Paveley, N. D. 2018. Changes in field dose–response curves for demethylation inhibitor (DMI) and quinone outside inhibitor (QoI) fungicides against Zymoseptoria tritici, related to laboratory sensitivity phenotyping and genotyping assays. Pest Management Science. 74 (2), pp. 302-313. https://doi.org/10.1002/ps.4725

Fitness Penalties in the Evolution of Fungicide Resistance

A - Papers appearing in refereed journals

Hawkins, N. J. and Fraaije, B. A. 2018. Fitness Penalties in the Evolution of Fungicide Resistance. Annual Review of Phytopathology. 56, pp. 339-360. https://doi.org/10.1146/annurev-phyto-080417-050012

The anaplerotic node is essential for the intracellular survival of Mycobacterium tuberculosis

A - Papers appearing in refereed journals

Basu, P., Sandhu, N., Bhatt, A., Singh, A., Balhana, R., Gobe, I., Crowhurst, N. A., Mendum, T. A., Gao, L., Ward, J. L., Beale, M. H., McFadden J. and Beste, D. J. V. 2018. The anaplerotic node is essential for the intracellular survival of Mycobacterium tuberculosis. Journal of Biological Chemistry. 293 (15), pp. 5695-5704. https://doi.org/10.1074/jbc.RA118.001839

Arable Crop Disease Alert System - AHDB Project Report 594

D1 - Technical reports: non-confidential

West, J. S., Canning, G., King, K. M., Fraaije, B. A. and Wili, S. 2018. Arable Crop Disease Alert System - AHDB Project Report 594. Stoneleigh Home Grown Cereals Authority (HGCA).

Effects of Organic and Conventional Crop Nutrition on Profiles of Polar Metabolites in Grain of Wheat

A - Papers appearing in refereed journals

Shewry, P. R., Rakszegi, M., Lovegrove, A., Amos, D., Corol, D. I., Tawfike, A., Miko, P. and Ward, J. L. 2018. Effects of Organic and Conventional Crop Nutrition on Profiles of Polar Metabolites in Grain of Wheat. Journal of Agricultural and Food Chemistry - JAFC. 66 (21), pp. 5346-5351. https://doi.org/10.1021/acs.jafc.8b01593

Salicin-7-sulfate: A new salicinoid from willow and implications for herbal medicine

A - Papers appearing in refereed journals

Noleto-Dias, C., Ward, J. L., Bellisai, A., Lomax, C. and Beale, M. H. 2018. Salicin-7-sulfate: A new salicinoid from willow and implications for herbal medicine. Fitoterapia. 127 (June), pp. 166-172. https://doi.org/10.1016/j.fitote.2018.02.009

Genetic analysis of Pyrenopeziza brassicae, cause of light leaf spot of brassicas, in the European Union, Oceania, and North America

C2 - Non-edited contributions to conferences

Carmody, S., King, K. M., Classen, B., Fraaije, B. A., West, J. S., Ocamb, C. M. and du Toit, L. 2017. Genetic analysis of Pyrenopeziza brassicae, cause of light leaf spot of brassicas, in the European Union, Oceania, and North America. APS Annual Meeting, San Antonio, Texas, USA, August 5-9, 2017. American Phytopathological Society (APS). https://doi.org/10.1094/PHYTO-107-12-S5.1

Strategies to delay the development of fungicide resistance : Alternation , mixtures or restricting the number of treatments?

C1 - Edited contributions to conferences/learned societies

Young, C., Van Den Bosch, F., Fraaije, B. A., Burnett, F., Knight, S., Gosling, P. and Paveley, N. 2017. Strategies to delay the development of fungicide resistance : Alternation , mixtures or restricting the number of treatments? Hull, R. I. C., Jellis, G., May, M., Miller, P., Moss, S. R., Nicholls, C. and Orson, J. (ed.) In : Crop Production in Southern Britain 2017, AAB 134. Association of Applied Biologists (AAB) Wellesbourne Warwick .

Chapter One - Fungi, Food Crops, and Biosecurity: Advances and Challenges

B - Book chapters etc edited externally

Lucas, J. A. 2017. Chapter One - Fungi, Food Crops, and Biosecurity: Advances and Challenges. in: Barling, D. (ed.) Advances in Food Security and Sustainability Elsevier.

Dose-dependent selection drives lineage replacement during the experimental evolution of SDHI fungicide resistance in Zymoseptoria tritici

A - Papers appearing in refereed journals

Gutierrez-Alonso, O., Hawkins, N. J., Cools, H. J., Shaw, M. W. and Fraaije, B. A. 2017. Dose-dependent selection drives lineage replacement during the experimental evolution of SDHI fungicide resistance in Zymoseptoria tritici. Evolutionary Applications. 10 (10), pp. 1055-1066. https://doi.org/10.1111/eva.12511

Azole sensitivity in Leptosphaeria pathogens of oilseed rape: the role of lanosterol 14 alpha-demethylase

A - Papers appearing in refereed journals

Sewell, T. R., Hawkins, N. J., Stotz, H. U., Huang, Y. J., Kelly, S. L., Kelly, D. E., Fraaije, B. A. and Fitt, B. D. L. 2017. Azole sensitivity in Leptosphaeria pathogens of oilseed rape: the role of lanosterol 14 alpha-demethylase. Scientific Reports. 7 (15849). https://doi.org/10.1038/s41598-017-15545-9

British Mycological Society and British Society for Plant Pathology Joint Presidential Meeting 2017 - Fungal Exploitation and Control

A - Papers appearing in refereed journals

Lucas, J. A. and Hawkins, N. J. 2017. British Mycological Society and British Society for Plant Pathology Joint Presidential Meeting 2017 - Fungal Exploitation and Control. Outlooks on Pest Management. 28 (5), pp. 227-229(3). https://doi.org/10.1564/v28_oct_07

Defining genetic and chemical diversity in wheat grain by 1H-NMR spectroscopy of polar metabolites

A - Papers appearing in refereed journals

Shewry, P. R., Corol, D. I., Jones, H. D., Beale, M. H. and Ward, J. L. 2017. Defining genetic and chemical diversity in wheat grain by 1H-NMR spectroscopy of polar metabolites. Molecular Nutrition & Food Research. 61 (7), p. 1600807. https://doi.org/10.1002/mnfr.201600807

The Gsp-1 genes encode the wheat arabinogalactan peptide

C2 - Non-edited contributions to conferences

Wilkinson, M. D., Tosi, P., Lovegrove, A., Corol, D. I., Ward, J. L., Palmer, R., Powers, S., Passmore, D., Webster, G., Marcus, S. E., Knox, J. P. and Shewry, P. R. 2017. The Gsp-1 genes encode the wheat arabinogalactan peptide. Quality and Nutrition at MonoGram 2017, 4-6 April 2017, University of Bristol, Bristol , UK (oral presentation). pp. p10

Feruloylation and structure of arabinoxylan in wheat endosperm cell walls from RNAi lines with suppression of genes responsible for backbone synthesis and decoration

A - Papers appearing in refereed journals

Freeman, J., Ward, J. L., Kosik, O., Lovegrove, A., Wilkinson, M. D., Shewry, P. R. and Mitchell, R. A. C. 2017. Feruloylation and structure of arabinoxylan in wheat endosperm cell walls from RNAi lines with suppression of genes responsible for backbone synthesis and decoration. Plant Biotechnology Journal. 15 (11), pp. 1429-1438. https://doi.org/10.1111/pbi.12727

The Gsp-1 genes encode the wheat arabinogalactan peptide

A - Papers appearing in refereed journals

Wilkinson, M. D., Tosi, P., Lovegrove, A., Corol, D. I., Ward, J. L., Palmer, R., Powers, S. J., Passmore, D., Webster, G., Marcus, S. E., Knox, J. P. and Shewry, P. R. 2017. The Gsp-1 genes encode the wheat arabinogalactan peptide. Journal of Cereal Science. 74 (March), pp. 155-164. https://doi.org/10.1016/j.jcs.2017.02.006

BCPC annual diseases review

A - Papers appearing in refereed journals

Lucas, J. A. 2017. BCPC annual diseases review. Outlooks on Pest Management. 28 (1), pp. 21-23. https://doi.org/10.1564/v28_feb_06

Predicting Resistance by Mutagenesis: Lessons from 45 Years of MBC Resistance

A - Papers appearing in refereed journals

Hawkins, N. J. and Fraaije, B. A. 2016. Predicting Resistance by Mutagenesis: Lessons from 45 Years of MBC Resistance. Frontiers in Microbiology. 7, p. 1814. https://doi.org/10.3389/fmicb.2016.01814

Metabolite Profiling of Sugarcane Genotypes and Identification of Flavonoid Glycosides and Phenolic Acids

A - Papers appearing in refereed journals

Coutinho, I. D., Baker, J. M., Ward, J. L., Beale, M. H., Creste, S. and Cavalheiro, A. J. 2016. Metabolite Profiling of Sugarcane Genotypes and Identification of Flavonoid Glycosides and Phenolic Acids. Journal of Agricultural and Food Chemistry - JAFC. 64 (21), pp. 4198-4206. https://doi.org/10.1021/acs.jafc.6b01210

Endophytic bacterial community composition in wheat (Triticum aestivum) is determined by plant tissue type, developmental stage and soil nutrient availability

A - Papers appearing in refereed journals

Robinson, R. J., Fraaije, B. A., Clark, I. M., Jackson, R. W., Hirsch, P. R. and Mauchline, T. H. 2016. Endophytic bacterial community composition in wheat (Triticum aestivum) is determined by plant tissue type, developmental stage and soil nutrient availability. Plant and Soil. 405 (1-2), pp. 381-396. https://doi.org/10.1007/s11104-015-2495-4

Resistance management: we know why but so we know how?

B - Book chapters etc edited externally

Lucas, J. A. 2016. Resistance management: we know why but so we know how? in: Deising, H. B., Fraaije, B. A., Mehl, A., Oerke, E. C., Sierotzhi, H. and Stammler, G. (ed.) Modern fungicides and antifungal compounds Vol. VIII Deutsche Phytomedizinische Gesellschaft, Braunschweig.

Effector biology of Zymoseptoria tritici during interactions with wheat and with non-host plants

C2 - Non-edited contributions to conferences

Kettles, G. J., King, R., Hooper, J., Skinner, W., Hargreaves, J., Kanyuka, K., Fraaije, B. A. and Rudd, J. J. 2016. Effector biology of Zymoseptoria tritici during interactions with wheat and with non-host plants. IS-MPMI XVII Congress, Portland, Oregon, USA, 17-21 July, 2016. pp. Abstract Number S6-3

Acutifoliside, a novel benzoic acid glycoside from Salix acutifolia

A - Papers appearing in refereed journals

Wu, Y., Dobermann, D., Beale, M. H. and Ward, J. L. 2016. Acutifoliside, a novel benzoic acid glycoside from Salix acutifolia. Natural Product Research. 30 (15), pp. 1731-1739. https://doi.org/10.1080/14786419.2015.1137571

Azole fungicides: still live after all these years

A - Papers appearing in refereed journals

Lucas, J. A. 2016. Azole fungicides: still live after all these years. Outlooks on Pest Management. 27 (4), pp. 150-151(2). https://doi.org/10.1564/v27_aug_01

Proposal for a unified nomenclature for target-site mutations associated with resistance to fungicides.

A - Papers appearing in refereed journals

Mair, W., Lopez-Ruiz, F., Stammler, G ., Clark, W., Burnett, F., Hollomon, D., Ishii, H., Thind, T. S., Brown, J. K., Fraaije, B. A., Cools, H. J., Shaw, M., Fillinger, S., Walker, A. S., Mellado, E., Schnabel, G., Mehl, A. and Oliver, R. P. 2016. Proposal for a unified nomenclature for target-site mutations associated with resistance to fungicides. Pest Management Science. 72 (8), pp. 1449-1459. https://doi.org/10.1002/ps.4301

Wheat seed embryo excision enables the creation of axenic seedlings and Koch's postulates testing of putative bacterial endophytes

A - Papers appearing in refereed journals

Robinson, R. J., Fraaije, B. A., Clark, I. M., Jackson, R. W., Hirsch, P. R. and Mauchline, T. H. 2016. Wheat seed embryo excision enables the creation of axenic seedlings and Koch's postulates testing of putative bacterial endophytes. Scientific Reports. 6, p. 25581. https://doi.org/10.1038/srep25581

Multi-platform metabolomics analyses of a broad collection of fragrant and non-fragrant rice varieties reveals the high complexity of grain quality characteristics

A - Papers appearing in refereed journals

Mumm, R., Hageman, J. A., Calingacion, M. N., De Vos, R. C. H., Jonker, H. H., Erban, A., Kopka, J., Hansen, T. H., Laursen, K. H., Schjoerring, J. K., Ward, J. L., Beale, M. H., Jongee, S., Rauf, A., Habibi, F., Indrasari, S. D., Sakhan, S., Ramli, A., Romero, M., Reinke, R. F., Ohtsubo, K., Boualaphanh, C., Fitzgerald, M. A. and Hall, R. D. 2016. Multi-platform metabolomics analyses of a broad collection of fragrant and non-fragrant rice varieties reveals the high complexity of grain quality characteristics. Metabolomics. 12, p. 38. https://doi.org/10.1007/s11306-015-0925-1

Triticum monococcum lines with distinct metabolic phenotypes and phloem-based partial resistance to the bird cherry-oat aphid Rhopalosiphum padi

A - Papers appearing in refereed journals

Greenslade, A. F. C., Ward, J. L., Martin, J. L., Corol, D. I., Clark, S. J., Smart, L. E. and Aradottir, G. I. 2016. Triticum monococcum lines with distinct metabolic phenotypes and phloem-based partial resistance to the bird cherry-oat aphid Rhopalosiphum padi. Annals of Applied Biology - AAB. 168 (3), pp. 435-449. https://doi.org/10.1111/aab.12274

Using NMR-based metabolomics to evaluate postprandial urinary responses following consumption of minimally processed wheat bran or wheat aleurone by men and women

A - Papers appearing in refereed journals

Garg, R., Brennan, L., Price, R. K., Wallace, J. M. W., Strain, J. J., Gibney, M. J., Shewry, P. R., Ward, J. L., Garg, L. and Welch, R. W. 2016. Using NMR-based metabolomics to evaluate postprandial urinary responses following consumption of minimally processed wheat bran or wheat aleurone by men and women. Nutrients. 8 (2), p. 96. https://doi.org/10.3390/nu8020096

1H-NMR screening for the high-throughput determination of genotype and environmental effects on the content of asparagine in wheat grain

A - Papers appearing in refereed journals

Corol, D. I., Ravel, C., Rakszegi, M., Charmet, G., Bedo, Z., Beale, M. H., Shewry, P. R. and Ward, J. L. 2016. 1H-NMR screening for the high-throughput determination of genotype and environmental effects on the content of asparagine in wheat grain. Plant Biotechnology Journal. 14 (1), pp. 128-139. https://doi.org/10.1111/pbi.12364

Sigatoka Disease Complex of Banana in Brazil: Management Practices and Future Directions

A - Papers appearing in refereed journals

Brito Silva Darosci, F., Fraaije, B. A. and Miller, R. N. G. 2015. Sigatoka Disease Complex of Banana in Brazil: Management Practices and Future Directions. Outlooks on Pest Management. 26 (2), pp. 78-81. https://doi.org/10.1564/v26_apr_08

Distribution of lipids in the grain of wheat (cv. Hereward) determined by lipidomic analysis of milling and pearling fractions

A - Papers appearing in refereed journals

Gonzalez-Thuillier, I., Salt, L., Chope, G., Penson, S., Skeggs, P., Tosi, P., Powers, S. J., Ward, J. L., Wilde, P., Shewry, P. R. and Haslam, R. P. 2015. Distribution of lipids in the grain of wheat (cv. Hereward) determined by lipidomic analysis of milling and pearling fractions. Journal of Agricultural and Food Chemistry - JAFC. 63, pp. 10705-10716. https://doi.org/10.1021/acs.jafc.5b05289

Differentially penalized regression to predict agronomic traits from metabolites and markers in wheat

A - Papers appearing in refereed journals

Ward, J. L., Rakszegi, M., Bedo, Z., Shewry, P. R. and Mackay, I. 2015. Differentially penalized regression to predict agronomic traits from metabolites and markers in wheat. BMC Genetics. 16, p. 19. https://doi.org/10.1186/s12863-015-0169-0

The use of mathematical models to guide fungicide resistance management decisions

B - Book chapters etc edited externally

Van Den Bosch, F., Fraaije, B. A., Oliver, R., Van Den Berg, F. and Paveley, N. 2015. The use of mathematical models to guide fungicide resistance management decisions. in: Hollomon, D. W. and Ishii, H. (ed.) Fungicide resistance in plant pathogens Springer, Tokyo. pp. 49-62

Evidence-based resistance management: a review of existing evidence

B - Book chapters etc edited externally

Van Den Bosch, F., Paveley, N., Fraaije, B. A., Van Den Berg, F. and Oliver, R. 2015. Evidence-based resistance management: a review of existing evidence. in: Hollomon, D. W. and Ishii, H. (ed.) Fungicide resistance in plant pathogens Springer, Tokyo. pp. 63-76

Postprandial plasma betaine and other methyl donor-related responses after consumption of minimally processed wheat bran or wheat aleurone, or wheat aleurone incorporated into bread

A - Papers appearing in refereed journals

Keaveney, E. M., Price, R. K., Hamill, L. L., Wallace, J. M. W., Mcnulty, H., Ward, M., Strain, J. J., Ueland, P. M., Molloy, A. M., Piironen, V., Von Reding, W., Shewry, P. R., Ward, J. L. and Welch, R. W. 2015. Postprandial plasma betaine and other methyl donor-related responses after consumption of minimally processed wheat bran or wheat aleurone, or wheat aleurone incorporated into bread. British Journal Of Nutrition. 113 (3), pp. 445-453. https://doi.org/10.1017/S0007114514003778

Airborne sampling and optical sensing methods for macro scale mapping

C2 - Non-edited contributions to conferences

West, J. S., Canning, G., Heard, S., Fraaije, B. A., Bonants, P., Van Gent-Pelzer, M., Nicolaisen, M., Justesen, A. F. and Wili, S. G. 2015. Airborne sampling and optical sensing methods for macro scale mapping. Abstracts IPM Innovation in Europe, Poznan, 14-16 January 2015 . pp. 57

The evolution of fungicide resistance

B - Book chapters etc edited externally

Lucas, J. A., Hawkins, N. J. and Fraaije, B. A. 2015. The evolution of fungicide resistance. in: Sariaslani, S. and Gadd, G. M. (ed.) Advances in Applied Microbiology Vol.90 Elsevier.

Sterol biosynthesis inhibitors: modes of resistance and development of CYP51 mutations

C2 - Non-edited contributions to conferences

Hawkins, N. J. and Fraaije, B. A. 2014. Sterol biosynthesis inhibitors: modes of resistance and development of CYP51 mutations. 248th National Meeting of the Amercian Chemical Society (ACS) 10-14 August , San Francisco, CA, 2014. American Chemical Society (ACS).

The impact of tissue type, growth stage and fertilizers on the community structure of cultured bacterial wheat endophytes in the Broadbalk experiment

C2 - Non-edited contributions to conferences

Robinson, R. R., Fraaije, B. A., Clark, I. M., Jackson, R. W., Hirsch, P. R. and Mauchline, T. H. 2014. The impact of tissue type, growth stage and fertilizers on the community structure of cultured bacterial wheat endophytes in the Broadbalk experiment. American Phytopathological Society (APS).

Use of loop-mediated isothermal amplification assays to detect azole-insensitive CYP51- overexpressing strains of Zymoseptoria tritici

C2 - Non-edited contributions to conferences

Fraaije, B. A. 2014. Use of loop-mediated isothermal amplification assays to detect azole-insensitive CYP51- overexpressing strains of Zymoseptoria tritici. American Phytopathological Society (APS).

Evolution and spread of azole-insensitive Zymoseptoria tritici field isolates in the UK

C2 - Non-edited contributions to conferences

Fraaije, B. A., Atkins, S., Luo, J., Diez De La Fuente, P. and Hawkins, N. J. 2014. Evolution and spread of azole-insensitive Zymoseptoria tritici field isolates in the UK. American Phytopathological Society (APS).

The role of multiple CYP51 paralogues in intrinsic and acquired azole sensitivity differences

B - Book chapters etc edited externally

Hawkins, N. J., Cools, H. J. and Fan, J. 2014. The role of multiple CYP51 paralogues in intrinsic and acquired azole sensitivity differences. in: Fraaije, B. A., Deising, H. B. and Dehne, H. W. (ed.) Modern fungicides and antifungal compounds. Vol. 7 Deutsche Phytomedizinische Gesellschaft, Braunschweig. pp. 97-102

Molecular screening for avirulence alleles AvrLm1 and AvrLm6 in airborne inoculum of Leptosphaeria maculans and winter oilseed rape (Brassica napus) plants from Poland and the UK

A - Papers appearing in refereed journals

Kaczmarek, J., Latunde-Dada, A. O., Irzykowski, W., Cools, H. J., Stonard, J. F., Brachaczek, A. and Jedryczka, M. 2014. Molecular screening for avirulence alleles AvrLm1 and AvrLm6 in airborne inoculum of Leptosphaeria maculans and winter oilseed rape (Brassica napus) plants from Poland and the UK. Journal of Applied Genetics. 55 (4), pp. 529-539. https://doi.org/10.1007/s13353-014-0235-8

Opposite variations in fumarate and malate dominate metabolic phenotypes of Arabidopsis salicylate mutants with abnormal biomass under chilling

A - Papers appearing in refereed journals

Scott, I. M., Ward, J. L., Miller, S. J. and Beale, M. H. 2014. Opposite variations in fumarate and malate dominate metabolic phenotypes of Arabidopsis salicylate mutants with abnormal biomass under chilling. Physiologia Plantarum. 152 (4), pp. 660-674. https://doi.org/10.1111/ppl.12210

Effect of breadmaking process on In vitro gut microbiota parameters in irritable bowel syndrome

A - Papers appearing in refereed journals

Costabile, A., Santarelli, S., Claus, S. P., Sanderson, J., Hudspith, B. N., Brostoff, J., Ward, J. L., Lovegrove, A., Shewry, P. R., Jones, H. E., Whitley, A. M. and Gibson, G. R. 2014. Effect of breadmaking process on In vitro gut microbiota parameters in irritable bowel syndrome. PLOS ONE. 9, p. e111225. https://doi.org/10.1371/journal.pone.0111225

An efficient high throughput metabotyping platform for screening of biomass willows

A - Papers appearing in refereed journals

Corol, D. I., Harflett, C., Beale, M. H. and Ward, J. L. 2014. An efficient high throughput metabotyping platform for screening of biomass willows. Metabolites. 4 (4), pp. 946-976. https://doi.org/10.3390/metabo4040946

The Y123H substitution perturbs FvCYP51B function and confers prochloraz resistance in laboratory mutants of Fusarium verticillioides

A - Papers appearing in refereed journals

Fan, J., Chen, F., Diao, Y., Cools, H. J., Kelly, S. L. and Liu, X. 2014. The Y123H substitution perturbs FvCYP51B function and confers prochloraz resistance in laboratory mutants of Fusarium verticillioides. Plant Pathology. 63 (4), pp. 952-960. https://doi.org/10.1111/ppa.12168

Alterations in the predicted regulatory and coding regions of the sterol 14alpha-demethylase gene (CYP51) confer decreased azole sensitivity in the oilseed rape pathogen Pyrenopeziza brassicae

A - Papers appearing in refereed journals

Carter, H. E., Fraaije, B. A., West, J. S., Kelly, S. L., Mehl, A., Shaw, M. W. and Cools, H. J. 2014. Alterations in the predicted regulatory and coding regions of the sterol 14alpha-demethylase gene (CYP51) confer decreased azole sensitivity in the oilseed rape pathogen Pyrenopeziza brassicae. Molecular Plant Pathology. 15 (5), pp. 513-522. https://doi.org/10.1111/mpp.12106

Sterol biosynthesis inhibitors: modes of resistance and development of CPY51 mutations

C2 - Non-edited contributions to conferences

Hawkins, N. J. and Fraaije, B. A. 2014. Sterol biosynthesis inhibitors: modes of resistance and development of CPY51 mutations. Abstracts 13th IUPAC International Congress of Pesticide Chemistry, San Francisco, 10-14 August 2014 . pp. 234

Paralog re-emergence: a novel, historically contingent mechanism in the evolution of antimicrobial resistance

A - Papers appearing in refereed journals

Hawkins, N. J., Cools, H. J., Sierotzki, H., Shaw, M. W., Knogge, W., Kelly, S. L., Kelly, D. E. and Fraaije, B. A. 2014. Paralog re-emergence: a novel, historically contingent mechanism in the evolution of antimicrobial resistance. Molecular Biology And Evolution. 31 (7), pp. 1793-1802. https://doi.org/10.1093/molbev/msu134

A genome-wide metabolomic resource for tomato fruit from Solanum pennellii

A - Papers appearing in refereed journals

Perez-Fons, L., Wells, T., Corol, D. I., Ward, J. L., Gerrish, C., Beale, M. H., Seymour, G. B., Bramley, P. M. and Fraser, P. D. 2014. A genome-wide metabolomic resource for tomato fruit from Solanum pennellii. Scientific Reports. 4, p. 3859. https://doi.org/10.1038/srep03859

Sustainable crop protection: the storm before the calm?

C1 - Edited contributions to conferences/learned societies

Lucas, J. A. and Fraaije, B. A. 2014. Sustainable crop protection: the storm before the calm? Proceedings Dundee Conference Crop Protection in Northern Britain, Dundee, 25-26 February 2014 . pp. 61-70

Effects of plant pathogens on population dynamics and community composition in grassland ecosystems: two case studies

A - Papers appearing in refereed journals

Jeger, M. J., Salama, N. K. G., Shaw, M. W., Van Den Berg, F. and Van Den Bosch, F. 2014. Effects of plant pathogens on population dynamics and community composition in grassland ecosystems: two case studies. European Journal of Plant Pathology. 138, pp. 513-527. https://doi.org/10.1007/s10658-013-0325-1

Optimising the content and composition of dietary fibre in wheat grain for end-use quality

B - Book chapters etc edited externally

Shewry, P. R., Saulnier, L., Gebruers, K., Mitchell, R. A. C., Freeman, J., Nemeth, C. and Ward, J. L. 2014. Optimising the content and composition of dietary fibre in wheat grain for end-use quality. in: Tuberosaetal, R. (ed.) Genomics of plant genetic resources Springer, Dordrecht. pp. 455-466

Accounting for the Economic Risk Caused by Variation in Disease Severity in Fungicide Dose Decisions, Exemplified for Mycosphaerella graminicola on Winter Wheat

A - Papers appearing in refereed journals

Te Beest, D. E., Paveley, N. D., Shaw, M. W. and Van Den Bosch, F. 2013. Accounting for the Economic Risk Caused by Variation in Disease Severity in Fungicide Dose Decisions, Exemplified for Mycosphaerella graminicola on Winter Wheat. Phytopathology. 103 (7), pp. 666-672. https://doi.org/10.1094/PHYTO-05-12-0119-R

Bacterial endophytes in wheat (Triticum aestivum): isolation, characterisation and bio-prospecting

C2 - Non-edited contributions to conferences

Robinson, R., Mauchline, T. H., Hirsch, P. R., Jackson, R., Frost, H. and Fraaije, B. A. 2013. Bacterial endophytes in wheat (Triticum aestivum): isolation, characterisation and bio-prospecting. Schneider, C. (ed.) Abstracts 5th International Symposium on Plant Protection and Plant Health in Europe: Endophytes for Plant Protection: the State of the Art, Berlin, 26-29 May 2013 . DPG, Braunschweig. pp. 4-6

New developments in identification and quantification of airborne inoculum

C2 - Non-edited contributions to conferences

West, J. S., Heard, S., Canning, G., Fraaije, B. A. and Hammond-Kosack, K. E. 2013. New developments in identification and quantification of airborne inoculum.

Metabolomics reveals hemiterpenoids as new players in the carbon-nitrogen economy

B - Book chapters etc edited externally

Beale, M. H. and Ward, J. L. 2013. Metabolomics reveals hemiterpenoids as new players in the carbon-nitrogen economy. in: Gang, D. R. (ed.) 50 Years of phytochemistry research (Advances in Phytochemistry 43) Springer, Cham. pp. 1-20

CPY51 paralogues and azole sensitivity in Rhynchosporium commune

C2 - Non-edited contributions to conferences

Hawkins, N. J., Cools, H. J. and Fraaije, B. A. 2013. CPY51 paralogues and azole sensitivity in Rhynchosporium commune. Abstracts 14th Congress of the European Society for Evolutionary Biology, Lisbon, 19-24 August 2013 . pp. 859

Mapping the adaptive landscape of Mycosphaerella graminicola CYP51 under selection by azole fungicides

C2 - Non-edited contributions to conferences

Hawkins, N. J., Cools, H. J. and Fraaije, B. A. 2013. Mapping the adaptive landscape of Mycosphaerella graminicola CYP51 under selection by azole fungicides. Abstracts 14th Congress of the European Society for Evolutionary Biology, Lisbon, 19-24 August 2013 . pp. 19

Constraints on the evolution of azole resistance in plant pathogenic fungi

A - Papers appearing in refereed journals

Cools, H. J., Hawkins, N. J. and Fraaije, B. A. 2013. Constraints on the evolution of azole resistance in plant pathogenic fungi. Plant Pathology. 62 (Suppl. 1), pp. 36-42. https://doi.org/10.1111/ppa.12128

Simultaneous real-time PCR detection of Fusarium asiaticum, F. ussurianum and F. vorosii, representing the Asian clade of the F. graminearum species complex

A - Papers appearing in refereed journals

Fernandez-Ortuno, D., Waalwijk, C., Van Der Lee, T., Fan, J., Atkins, S., West, J. S. and Fraaije, B. A. 2013. Simultaneous real-time PCR detection of Fusarium asiaticum, F. ussurianum and F. vorosii, representing the Asian clade of the F. graminearum species complex. International Journal of Food Microbiology. 166, pp. 148-154. https://doi.org/10.1016/j.ijfoodmicro.2013.06.007

Merits of random forests emerge in evaluation of chemometric classifiers by external validation

A - Papers appearing in refereed journals

Scott, I. M., Lin, W., Liakata, M., Wood, J. E., Vermeer, C. P., Allaway, D., Ward, J. L., Draper, J., Beale, M. H., Corol, D. I., Baker, J. M. and King, R. D. 2013. Merits of random forests emerge in evaluation of chemometric classifiers by external validation. Analytica Chimica Acta. 801, pp. 22-33. https://doi.org/10.1016/j.aca.2013.09.027

Detection and molecular characterisation of Pyrenopeziza brassicae isolates resistant to methyl benzimidazole carbamates

A - Papers appearing in refereed journals

Carter, H. E., Cools, H. J., West, J. S., Shaw, M. W. and Fraaije, B. A. 2013. Detection and molecular characterisation of Pyrenopeziza brassicae isolates resistant to methyl benzimidazole carbamates. Pest Management Science. 69 (9), pp. 1040-1048. https://doi.org/10.1002/ps.3585

Investigating the beneficial traits of Trichoderma hamatum GD12 for sustainable agriculture - insights from genomics

A - Papers appearing in refereed journals

Studholme, D. J., Harris, B., Le Cocq, K., Winsbury, R., Perera, V., Ryder, L., Ward, J. L., Beale, M. H., Thornton, C. R. and Grant, M. 2013. Investigating the beneficial traits of Trichoderma hamatum GD12 for sustainable agriculture - insights from genomics. Frontiers in Plant Science. 4, p. 258 (13pp). https://doi.org/10.3389/fpls.2013.00258

One step ahead? The evolution of fungicide resistance in Septoria leaf blotch of wheat

C2 - Non-edited contributions to conferences

Lucas, J. A., Cools, H. J. and Fraaije, B. A. 2013. One step ahead? The evolution of fungicide resistance in Septoria leaf blotch of wheat. Abstracts Society for General Microbiology Autumn Conference, Brighton, 2-4 September 2013 . pp. 13

Risk assessment on the impact of environmental usage of triazoles on the development and spread of resistance to medical triazoles in Aspergillus species (ECDC Technical Report)

D1 - Technical reports: non-confidential

Kleinkauf, N., Verweij, P. E., Arendrup, M. C., Donnelly, P. J., Cuenca-Estrella, M., Fraaije, B. A., Melchers, W. J. G., Adriaenssens, N., Kema, G. H. J., Ullmann, A., Bowyer, P. and Denning, D. W. 2013. Risk assessment on the impact of environmental usage of triazoles on the development and spread of resistance to medical triazoles in Aspergillus species (ECDC Technical Report). ECDC, Stockholm. https://doi.org/10.2900/76274

CYP51 paralogues and azole sensitivity in Rhynchosporium commune

C2 - Non-edited contributions to conferences

Hawkins, N. J., Cools, H. J. and Fraaije, B. A. 2013. CYP51 paralogues and azole sensitivity in Rhynchosporium commune. Chinese Society for Plant Pathology.

Evolution and spread of Mycosphaerella graminicola isolates overexpressing CYP51 or carrying different CYP51 variants in response to azole fungicide applications

C2 - Non-edited contributions to conferences

Fraaije, B. A., Atkins, S., Luo, J., De La Fuente, P. D., Hawkins, N. J. and Cools, H. J. 2013. Evolution and spread of Mycosphaerella graminicola isolates overexpressing CYP51 or carrying different CYP51 variants in response to azole fungicide applications. Chinese Society for Plant Pathology.

Update on the evolution and selection for azole and Succinate DeHydrogenase Inhibitor (SDHI) fungicide insensitivity in UK Mycosphaerella graminicola populations

C2 - Non-edited contributions to conferences

Fraaije, B. A. 2013. Update on the evolution and selection for azole and Succinate DeHydrogenase Inhibitor (SDHI) fungicide insensitivity in UK Mycosphaerella graminicola populations. Chinese Society for Plant Pathology.

Detection of azole insensitive CYP51 over-expressing strains of Mycosphaerella graminicola using loop-mediated isothermal amplification (LAMP) assays

C2 - Non-edited contributions to conferences

Fraaije, B. A. and Cools, H. J. 2013. Detection of azole insensitive CYP51 over-expressing strains of Mycosphaerella graminicola using loop-mediated isothermal amplification (LAMP) assays. Chinese Society for Plant Pathology.

Genus-specific CYP51C of Fusarium graminearum identified as a novel CYP51 rather than azole fungicide target sterol 14alpha-demethylases

C2 - Non-edited contributions to conferences

Fan, J., Urban, M., Parker, J. E., Brewer, H. C., Kelly, S. L., Hammond-Kosack, K. E., Fraaije, B. A., Liu, X. and Cools, H. J. 2013. Genus-specific CYP51C of Fusarium graminearum identified as a novel CYP51 rather than azole fungicide target sterol 14alpha-demethylases. Chinese Society for Plant Pathology.

13C-flux spectral analysis of host-pathogen metabolism reveals a mixed diet for intracellular Mycobacterium tuberculosis

A - Papers appearing in refereed journals

Beste, D. J. V., Noh, K., Niedenfuhr, S., Mendum, T. A., Hawkins, N. D., Ward, J. L., Beale, M. H., Wiechert, W. and Mcfadden, J. 2013. 13C-flux spectral analysis of host-pathogen metabolism reveals a mixed diet for intracellular Mycobacterium tuberculosis. Chemistry and Biology. 20 (8), pp. 1012-1021. https://doi.org/10.1016/j.chembiol.2013.06.012

Prothioconazole and prothioconazole-desthio activities against Candida albicans sterol 14-alpha-demethylase

A - Papers appearing in refereed journals

Parker, J. E., Warrilow, A. G. S., Cools, H. J., Fraaije, B. A., Lucas, J. A., Rigdova, K., Griffiths, W. J., Kelly, D. E. and Kelly, S. L. 2013. Prothioconazole and prothioconazole-desthio activities against Candida albicans sterol 14-alpha-demethylase. Applied and Environmental Microbiology. 79, pp. 1639-1645. https://doi.org/10.1128/AEM.03246-12

Metabolomic and elemental profiling of melon fruit quality as affected by genotype and environment

A - Papers appearing in refereed journals

Bernillon, S., Biais, B., Deborde, C., Maucourt, M., Cabasson, C., Gibon, Y., Hansen, T. H., Husted, S., De Vos, R. C. H., Mumm, R., Jonker, H., Ward, J. L., Miller, S. J., Baker, J. M., Burger, J., Tadmor, Y., Beale, M. H., Schjoerring, J. K., Schaffer, A. A., Rolin, D., Hall, R. D. and Moing, A. 2013. Metabolomic and elemental profiling of melon fruit quality as affected by genotype and environment. Metabolomics. 9, pp. 57-77. https://doi.org/10.1007/s11306-012-0429-1

Exploring the metabolome of cereal infecting fusaria

C2 - Non-edited contributions to conferences

Hammond-Kosack, K. E., Lowe, R. G. T., Canning, G., Urban, M., Beale, M. H. and Ward, J. L. 2013. Exploring the metabolome of cereal infecting fusaria. Abstracts 27th Fungal Genetics Conference, Asilomar, 12-17 March 2013 . pp. 21

Characterization of the sterol 14alpha-demethylases of Fusarium graminearum identifies a novel genus-specific CYP51 function

A - Papers appearing in refereed journals

Fan, J., Urban, M., Parker, J. E., Brewer, H. C., Kelly, S. L., Hammond-Kosack, K. E., Fraaije, B. A., Liu, X. and Cools, H. J. 2013. Characterization of the sterol 14alpha-demethylases of Fusarium graminearum identifies a novel genus-specific CYP51 function. New Phytologist. 198 (3), pp. 821-835. https://doi.org/10.1111/nph.12193

Natural variation in grain composition of wheat and related cereals

A - Papers appearing in refereed journals

Shewry, P. R., Hawkesford, M. J., Piironen, V., Lampi, A-M., Gebruers, K., Boros, D., Andresson, A. A. M., Aman, P., Rakszegi, M., Bedo, Z. and Ward, J. L. 2013. Natural variation in grain composition of wheat and related cereals. Journal of Agricultural and Food Chemistry - JAFC. 61, pp. 8295-8303. https://doi.org/10.1021/jf3054092

Aphid-induced accumulation of trehalose in Arabidopsis thaliana is systemic and dependent upon aphid density

A - Papers appearing in refereed journals

Hodge, S., Ward, J. L., Beale, M. H., Bennett, M., Mansfield, J. W. and Powell, G. 2013. Aphid-induced accumulation of trehalose in Arabidopsis thaliana is systemic and dependent upon aphid density. Planta. 237, pp. 1057-1064. https://doi.org/10.1007/s00425-012-1826-4

Exploitation of genomics in fungicide research: current status and future perspectives

A - Papers appearing in refereed journals

Cools, H. J. and Hammond-Kosack, K. E. 2013. Exploitation of genomics in fungicide research: current status and future perspectives. Molecular Plant Pathology. 14 (2), pp. 197-210. https://doi.org/10.1111/mpp.12001

Update on mechanisms of azole resistance in Mycosphaerella graminicola and implications for future control

A - Papers appearing in refereed journals

Cools, H. J. and Fraaije, B. A. 2013. Update on mechanisms of azole resistance in Mycosphaerella graminicola and implications for future control. Pest Management Science. 69 (2), pp. 150-155. https://doi.org/10.1002/ps.3348

Contents of dietary fibre components and their relation to associated bioactive components in whole grain wheat samples from the HEALTHGRAIN diversity screen

A - Papers appearing in refereed journals

Andersson, A. A. M., Andersson, R., Piironen, V., Lampi, A-M., Nystrom, L., Boros, D., Fras, A., Gebruers, K., Courtin, C. M., Delcour, J. A., Rakszegi, M., Bedo, Z., Ward, J. L., Shewry, P. R. and Aman, P. 2013. Contents of dietary fibre components and their relation to associated bioactive components in whole grain wheat samples from the HEALTHGRAIN diversity screen. Food Chemistry. 136 (3-4), pp. 1243-1248. https://doi.org/10.1016/j.foodchem.2012.09.074

Role of inoculum sources in Rhynchosporium population dynamics and epidemics on barley

A - Papers appearing in refereed journals

Fitt, B. D. L., Atkins, S. D., Fraaije, B. A., Lucas, J. A., Newton, A. C., Looseley, M., Werner, P., Harrap, D., Ashworth, M., Southgate, J., Phillips, H. and Gilchrist, A. 2012. Role of inoculum sources in Rhynchosporium population dynamics and epidemics on barley. HGCA Project Report. 486.

Investigations into the molecular mechanisms responsible for the decline in sensitivity to DMI fungicides in Mycosphaerella graminicola populations

C2 - Non-edited contributions to conferences

Fraaije, B. A. and Cools, H. J. 2012. Investigations into the molecular mechanisms responsible for the decline in sensitivity to DMI fungicides in Mycosphaerella graminicola populations. American Phytopathological Society (APS).

Reduced azole sensitivity in the oilseed rape pathogen Pyrenopziza brassicae

C2 - Non-edited contributions to conferences

Carter, H. E., Cools, H. J., West, J. S., Shaw, M., Mehl, A. and Fraaije, B. A. 2012. Reduced azole sensitivity in the oilseed rape pathogen Pyrenopziza brassicae. American Phytopathological Society (APS).

Detection and quantification of airborne inoculum of Pyrenopeziza brassicae in Polish and UK winter oilseed rape crops by real-time PCR assays

A - Papers appearing in refereed journals

Karolewski, Z., Kaczmarek, J., Jedryczka, M., Cools, H. J., Fraaije, B. A., Lucas, J. A. and Latunde-Dada, A. O. 2012. Detection and quantification of airborne inoculum of Pyrenopeziza brassicae in Polish and UK winter oilseed rape crops by real-time PCR assays. Grana. 51, pp. 270-279. https://doi.org/10.1080/00173134.2011.653401

Quantitative PCR analysis of abundance of airborne propagules of Leptosphaeria species in air samples from different regions of Poland

A - Papers appearing in refereed journals

Kaczmarek, J., Jedryczka, M., Cools, H. J., Fitt, B. D. L., Lucas, J. A. and Latunde-Dada, A. O. 2012. Quantitative PCR analysis of abundance of airborne propagules of Leptosphaeria species in air samples from different regions of Poland. Aerobiologia. 28, pp. 199-212. https://doi.org/10.1007/s10453-011-9228-9

Genomic approaches to analysing disease caused by plant pathogenic Mycosphaerella species

C2 - Non-edited contributions to conferences

Lucas, J. A., Amaral, A., Hammond-Kosack, K. E. and Rudd, J. J. 2012. Genomic approaches to analysing disease caused by plant pathogenic Mycosphaerella species. Abstracts 4th Brazilian Congress of Biotechnology, Guaruja, 28 October - 1 November 2012 . pp. 30

Unexpected hemiterpenoids in Arabidopsis, revealed by metabolomic fingerprinting, give new insights into C/N metabolic balancing

C2 - Non-edited contributions to conferences

Ward, J. L., Baker, J. M., Llewellyn, A. M., Hawkins, N. D. and Beale, M. H. 2012. Unexpected hemiterpenoids in Arabidopsis, revealed by metabolomic fingerprinting, give new insights into C/N metabolic balancing. Taylor & Francis.

Effects of genotype and environment on the contents of betaine, choline and trigonelline in cereal grains

A - Papers appearing in refereed journals

Corol, D. I., Ravel, C., Raksegi, M., Bedo, Z., Charmet, G., Beale, M. H., Shewry, P. R. and Ward, J. L. 2012. Effects of genotype and environment on the contents of betaine, choline and trigonelline in cereal grains. Journal of Agricultural and Food Chemistry - JAFC. 60, pp. 5471-5481. https://doi.org/10.1021/jf3008794

Realising the potential of plant metabolomics

C2 - Non-edited contributions to conferences

Beale, M. H. and Ward, J. L. 2012. Realising the potential of plant metabolomics.

Exploiting genetic variation to improve wheat composition for the prevention of chronic diseases

A - Papers appearing in refereed journals

Shewry, P. R. and Ward, J. L. 2012. Exploiting genetic variation to improve wheat composition for the prevention of chronic diseases. Food and Energy Security. 1, pp. 47-60. https://doi.org/10.1002/fes3.2

An integrated study of grain development of wheat (cv. Hereward)

A - Papers appearing in refereed journals

Shewry, P. R., Mitchell, R. A. C., Tosi, P., Wan, Y., Toscano-Underwood, C., Lovegrove, A., Freeman, J., Toole, G. A., Mills, E. N. C. and Ward, J. L. 2012. An integrated study of grain development of wheat (cv. Hereward). Journal of Cereal Science. 56, pp. 21-30. https://doi.org/10.1016/j.jcs.2011.11.007

Developing new types of wheat with enhanced health benefits

A - Papers appearing in refereed journals

Shewry, P. R., Charmet, G., Branlard, G., Lafiandra, D., Gergely, S., Salgo, A., Saulnier, L., Bedo, Z., Mills, E. N. C. and Ward, J. L. 2012. Developing new types of wheat with enhanced health benefits. Trends In Food Science & Technology. 25 (2), pp. 70-77. https://doi.org/10.1016/j.tifs.2012.01.003

Overexpression of the sterol 14α-demethylase gene (MgCYP51) in Mycosphaerella graminicola isolates confers a novel azole fungicide sensitivity phenotype.

A - Papers appearing in refereed journals

Cools, H. J., Bayon, C., Atkins, S., Lucas, J. A. and Fraaije, B. A. 2012. Overexpression of the sterol 14α-demethylase gene (MgCYP51) in Mycosphaerella graminicola isolates confers a novel azole fungicide sensitivity phenotype. Pest Management Science. 68 (7), pp. 1034-1040. https://doi.org/10.1002/ps.3263

2-Carboxy-D-arabinitol 1-phosphate (CA1P) phosphatase: evidence for a wider role in plant Rubisco regulation

A - Papers appearing in refereed journals

Andralojc, P. J., Madgwick, P. J., Tao, Y., Keys, A. J., Ward, J. L., Beale, M. H., Loveland, J. E., Jackson, P. J., Willis, A. C., Gutteridge, S. and Parry, M. A. J. 2012. 2-Carboxy-D-arabinitol 1-phosphate (CA1P) phosphatase: evidence for a wider role in plant Rubisco regulation. Biochemical Journal. 442 (3), pp. 733-742. https://doi.org/10.1042/BJ20111443

Tissue preparation using Arabidopsis

B - Book chapters etc edited externally

Llewellyn, A. M., Lewis, J., Miller, S. J., Corol, D. I., Beale, M. H. and Ward, J. L. 2012. Tissue preparation using Arabidopsis. in: Hall, R. D. and Hardy, N. W. (ed.) Plant metabolomics: methods and protocols (Methods in Molecular Biology, vol. 860 Springer, New York. pp. 65-81

Combined NMR and flow injection ESI-MS for Brassicaceae metabolomics

B - Book chapters etc edited externally

Baker, J. M., Ward, J. L. and Beale, M. H. 2012. Combined NMR and flow injection ESI-MS for Brassicaceae metabolomics. in: Hall, R. D. and Hardy, N. W. (ed.) Plant metabolomics: methods and protocols (Methods in Molecular Biology, vol. 860) Springer, New York. pp. 177-191

Genetic basis of control of Rynchosporium secalis infection and symptom expression in barley

A - Papers appearing in refereed journals

Looseley, M. E., Newton, A. C., Atkins, S. D., Fitt, B. D. L., Fraaije, B. A., Thomas, W. T. B., Keith, R., Macaulay, M., Lynott, J. and Harrap, D. 2012. Genetic basis of control of Rynchosporium secalis infection and symptom expression in barley. Euphytica. 184, pp. 47-56. https://doi.org/10.1007/s10681-011-0485-z

Risk assessment studies on succinate dehydrogenase inhibitors, the new weapons in the battle to control Septoria leaf blotch in wheat

A - Papers appearing in refereed journals

Fraaije, B. A., Bayon, C., Atkins, S., Cools, H. J., Lucas, J. A. and Fraaije, M. W. 2012. Risk assessment studies on succinate dehydrogenase inhibitors, the new weapons in the battle to control Septoria leaf blotch in wheat. Molecular Plant Pathology. 13 (3), pp. 263-275. https://doi.org/10.1111/j.1364-3703.2011.00746.x

A dual-targeted purple acid phosphatase in Arabidopsis thaliana moderates carbon metabolism and its overexpression leads to faster plant growth and higher seed yield

A - Papers appearing in refereed journals

Sun, F., Suen, P. K., Zhang, Y., Liang, C., Carrie, C., Whelan, J., Ward, J. L., Hawkins, N. D., Jiang, L. and Lim, B. L. 2012. A dual-targeted purple acid phosphatase in Arabidopsis thaliana moderates carbon metabolism and its overexpression leads to faster plant growth and higher seed yield. New Phytologist. 194 (1), pp. 206-219. https://doi.org/10.1111/j.1469-8137.2011.04026.x

Resistance to azole fungicides in Mycosphaerella graminicola: mechanisms and management

B - Book chapters etc edited externally

Cools, H. J. and Fraaije, B. A. 2012. Resistance to azole fungicides in Mycosphaerella graminicola: mechanisms and management. in: Thind, T. S. (ed.) Fungicide resistance in crop protection: risk and management CABI International, Wallingford, Oxon (CABI). pp. 64-77

Development of QoI resistance in Ramularia collo-cygni populations

C1 - Edited contributions to conferences/learned societies

Fountaine, J. M., Burnett, F. J. and Fraaije, B. A. 2011. Development of QoI resistance in Ramularia collo-cygni populations. Dehne, H. W. (ed.) Modern fungicides and antifungal compounds VI . DPG, Braunschweig. pp. 199-202

Molecular mechanisms of altered triazole sensitivity in Rhynchosporium secalis

C1 - Edited contributions to conferences/learned societies

Hawkins, N. J., Cools, H. J., Shaw, M. W., Sierotzki, H. and Fraaije, B. A. 2011. Molecular mechanisms of altered triazole sensitivity in Rhynchosporium secalis. Dehne, H. W. (ed.) Modern fungicides and antifungal compounds VI . DPG, Braunschwieg. pp. 129-134

The CYP51C gene, a novel and useful phylogenetic marker to distinguish different Fusarium species on cereals

C1 - Edited contributions to conferences/learned societies

Fernandez-Ortuno, D., Loza-Reyes, E., Rogers, S. L. and Fraaije, B. A. 2011. The CYP51C gene, a novel and useful phylogenetic marker to distinguish different Fusarium species on cereals. Dehne, H. W. (ed.) Modern fungicides and antifungal compounds VI . DPG, Braunschweig. pp. 413-416

Functional characterisation of Mycosphaerella graminicola sterol 14alpha-demethylase variants resistant to azole fungicides

C1 - Edited contributions to conferences/learned societies

Cools, H. J., Parker, J. E., Kelly, D. E., Lucas, J. A., Kelly, S. L. and Fraaije, B. A. 2011. Functional characterisation of Mycosphaerella graminicola sterol 14alpha-demethylase variants resistant to azole fungicides. Dehne, H. W. (ed.) Modern fungicides and antifungal compounds VI . DPG, Braunschweig. pp. 123-128

Health Grain: increasing the health benefits of wheat

C1 - Edited contributions to conferences/learned societies

Jones, H. D., Gebruers, K., Ward, J. L. and Shewry, P. R. 2011. Health Grain: increasing the health benefits of wheat. Chibbar, R. N. and Dexter, J. E. (ed.) Wheat Science Dynamics: Challenges and Opportunities. Proceedings International Wheat Quality Conference IV, Saskatoon, 2-6 June 2009 . Agrobios International, Jodhpur. pp. 419-429

The genetics and biochemistry of wheat grain colour

C2 - Non-edited contributions to conferences

Vaughan, S. P., Baker, J., Ward, J. L., Huttly, A. K. and Phillips, A. L. 2011. The genetics and biochemistry of wheat grain colour. ABRATES.

The effects of a plant defence priming compound, beta-aminobutyric acid, on multitrophic interactions with an insect herbivore and a hymenopterous parasitoid

A - Papers appearing in refereed journals

Hodge, S., Ward, J. L., Galster, A. M., Beale, M. H. and Powell, G. 2011. The effects of a plant defence priming compound, beta-aminobutyric acid, on multitrophic interactions with an insect herbivore and a hymenopterous parasitoid. BioControl. 56, pp. 699-711. https://doi.org/10.1007/s10526-011-9344-z

Genotype and environment effects on the contents of vitamins B1, B2, B3 and B6 in wheat grain

A - Papers appearing in refereed journals

Shewry, P. R., Van Schaik, F., Ravel, C., Charmet, G., Rakszegi, M., Bedo, Z. and Ward, J. L. 2011. Genotype and environment effects on the contents of vitamins B1, B2, B3 and B6 in wheat grain. Journal of Agricultural and Food Chemistry - JAFC. 59, pp. 10564-10571. https://doi.org/10.1021/jf202762b

Improving the health benefits of wheat

C1 - Edited contributions to conferences/learned societies

Shewry, P. R., Ward, J. L., Zhao, F-J., Ravel, C., Charmet, G., Lafiandra, D. and Bedo, Z. 2011. Improving the health benefits of wheat. Czech Academy Agricultural Sciences.

Postprandial glycemia, insulinemia and satiety responses in healthy subjects after whole grain rye bread made from different rye varieties. 1

A - Papers appearing in refereed journals

Rosen, L. A. H., Ostman, E. M., Shewry, P. R., Ward, J. L., Andersson, A. A. M., Piironen, V., Lampi, A-M., Rakszegi, M., Bedo, Z. and Bjorck, I. M. E. 2011. Postprandial glycemia, insulinemia and satiety responses in healthy subjects after whole grain rye bread made from different rye varieties. 1. Journal of Agricultural and Food Chemistry - JAFC. 59, pp. 12139-12148. https://doi.org/10.1021/jf2019825

Metabolomic analysis of Arabidopsis reveals hemiterpenoid glycosides as products of a nitrate ion-regulated, carbon flux overflow

A - Papers appearing in refereed journals

Ward, J. L., Baker, J. M., Llewellyn, A. M., Hawkins, N. D. and Beale, M. H. 2011. Metabolomic analysis of Arabidopsis reveals hemiterpenoid glycosides as products of a nitrate ion-regulated, carbon flux overflow. Proceedings of the National Academy of Sciences. 108, pp. 10762-10767. https://doi.org/10.1073/pnas.1018875108

13C metabolic flux analysis identifies an unusual route for pyruvate dissimilation in mycobacteria which requires isocitrate lyase and carbon dioxide fixation

A - Papers appearing in refereed journals

Beste, D. J. V., Bonde, B., Hawkins, N. D., Ward, J. L., Beale, M. H., Noack, S., Noh, K., Kruger, N. J., Ratcliffe, R. G. and Mcfadden, J. 2011. 13C metabolic flux analysis identifies an unusual route for pyruvate dissimilation in mycobacteria which requires isocitrate lyase and carbon dioxide fixation. PLOS Pathogens. 7, p. e1002091 (18pp). https://doi.org/10.1371/journal.ppat.1002091

Molecular modelling of the emergence of azole resistance in Mycosphaerella graminicola

A - Papers appearing in refereed journals

Mullins, J. G. L., Parker, J. E., Cools, H. J., Togawa, R. C., Lucas, J. A., Fraaije, B. A., Kelly, D. E. and Kelly, S. L. 2011. Molecular modelling of the emergence of azole resistance in Mycosphaerella graminicola. PLOS ONE. 6, p. e20973. https://doi.org/10.1371/journal.pone.0020973

Effects of fungicide on growth of Leptosphaeria maculans and L. biglobosa in relation to development of phoma stem canker on oilseed rape (Brassica napus)

A - Papers appearing in refereed journals

Huang, Y. J., Hood, J. R., Eckert, M. R., Stonard, J. F., Cools, H. J., King, G. J., Rossall, S., Ashworth, M. and Fitt, B. D. L. 2011. Effects of fungicide on growth of Leptosphaeria maculans and L. biglobosa in relation to development of phoma stem canker on oilseed rape (Brassica napus). Plant Pathology. 60 (4), pp. 607-620. https://doi.org/10.1111/j.1365-3059.2010.02416.x

Finished genome of the fungal wheat pathogen Mycosphaerella graminicola reveals dispensome structure, chromosome plasticity and stealth pathogenesis

A - Papers appearing in refereed journals

Goodwin, S. B., Ben M'barek, S., Dhillon, B., Wittenberg, A. H. J., Crane, C. F., Hane, J. K., Foster, A. J., Van Der Lee, T. A. J., Grimwood, J., Aerts, A., Antoniw, J. F., Bailey, A., Bluhm, B., Bowler, J., Bristow, J., Van Der Burgt, A., Canto-Canche, B., Churchill, A. C. L., Conde-Ferraez, L., Cools, H. J., Coutinho, P. M., Csukai, M., Dehal, P., De Wit, P., Donzelli, B., Van De Geest, H. C., Van Ham, R. C. H. J., Hammond-Kosack, K. E. and Rudd, J. J. 2011. Finished genome of the fungal wheat pathogen Mycosphaerella graminicola reveals dispensome structure, chromosome plasticity and stealth pathogenesis. PLOS Genetics. 7, p. e1002070 (17pp). https://doi.org/10.1371/journal.pgen.1002070

Analysis of two in planta expressed LysM effector homologs from the fungus Mycosphaerella graminicola reveals novel functional properties and varying contributions to virulence on wheat

A - Papers appearing in refereed journals

Marshall, R., Kombrink, A., Motteram, J., Loza-Reyes, E., Lucas, J. A., Hammond-Kosack, K. E., Thomma, B. P. H. J. and Rudd, J. J. 2011. Analysis of two in planta expressed LysM effector homologs from the fungus Mycosphaerella graminicola reveals novel functional properties and varying contributions to virulence on wheat. Plant Physiology. 156, pp. 756-769. https://doi.org/10.1104/pp.111.176347

Impact of recently emerged sterol 14alpha-demethylase (CYP51) variants of Mycosphaerella graminicola on azole fungicide sensitivity

A - Papers appearing in refereed journals

Cools, H. J., Mullins, J. G. L., Fraaije, B. A., Parker, J. E., Kelly, D. E., Lucas, J. A. and Kelly, S. L. 2011. Impact of recently emerged sterol 14alpha-demethylase (CYP51) variants of Mycosphaerella graminicola on azole fungicide sensitivity. Applied and Environmental Microbiology. 77, pp. 3830-3837. https://doi.org/10.1128/AEM.00027-11

Advances in plant disease and pest management

A - Papers appearing in refereed journals

Lucas, J. A. 2011. Advances in plant disease and pest management. The Journal of Agricultural Science. 149, pp. 91-114. https://doi.org/10.1017/S0021859610000997

Derivation and testing of a model to predict selection for fungicide resistance

A - Papers appearing in refereed journals

Hobbelen, P. H. F., Paveley, N. D., Fraaije, B. A., Lucas, J. A. and Van Den Bosch, F. 2011. Derivation and testing of a model to predict selection for fungicide resistance. Plant Pathology. 60 (2), pp. 304-313. https://doi.org/10.1111/j.1365-3059.2010.02380.x

Relationship between the contents of bioactive components in grain and the release dates of wheat lines in the HEALTHGRAIN diversity screen

A - Papers appearing in refereed journals

Shewry, P. R., Gebruers, K., Andersson, A. A. M., Aman, P., Piironen, V., Lampi, A-M., Boros, D., Rakszegi, M., Bedo, Z. and Ward, J. L. 2011. Relationship between the contents of bioactive components in grain and the release dates of wheat lines in the HEALTHGRAIN diversity screen. Journal of Agricultural and Food Chemistry - JAFC. 59, pp. 928-933. https://doi.org/10.1021/jf103860x

Mechanism of binding of prothioconazole to Mycosphaerella graminicola CYP51 differs from that of other azole antifungals

A - Papers appearing in refereed journals

Parker, J. E., Warrilow, A. G. S., Cools, H. J., Martel, C. M., Nes, W. D., Fraaije, B. A., Lucas, J. A., Kelly, D. E. and Kelly, S. L. 2011. Mechanism of binding of prothioconazole to Mycosphaerella graminicola CYP51 differs from that of other azole antifungals. Applied and Environmental Microbiology. 77, pp. 1460-1465. https://doi.org/10.1128/AEM.01332-10

Combined meta-genomics analyses unravel candidate genes for the grain dietary fiber content in bread wheat (Triticum aestivum L.)

A - Papers appearing in refereed journals

Quraishi, U. M., Murat, F., Abrouk, M., Pont, C., Confolent, C., Oury, F. X., Ward, J. L., Boros, D., Gebruers, K., Delcour, J. A., Courtin, C. M., Bedo, Z., Saulnier, L., Guillon, F., Balzergue, S., Shewry, P. R., Feuillet, C., Charmet, G. and Salse, J. 2011. Combined meta-genomics analyses unravel candidate genes for the grain dietary fiber content in bread wheat (Triticum aestivum L.). Functional and Integrative Genomics. 11, pp. 71-83. https://doi.org/10.1007/s10142-010-0183-2

The use of a CYP51C gene based on PCR-RFLP assay for simultaneous detection and identification of Fusarium avenaceum and F. tricinctum in wheat

A - Papers appearing in refereed journals

Fernandez-Ortuno, D., Atkins, S. L. and Fraaije, B. A. 2011. The use of a CYP51C gene based on PCR-RFLP assay for simultaneous detection and identification of Fusarium avenaceum and F. tricinctum in wheat. International Journal of Food Microbiology. 145, pp. 370-374. https://doi.org/10.1016/j.ijfoodmicro.2011.01.011

Impacts of changing air composition on severity of arable crop disease epidemics

A - Papers appearing in refereed journals

Fitt, B. D. L., Fraaije, B. A., Chandramohan, P. and Shaw, M. W. 2011. Impacts of changing air composition on severity of arable crop disease epidemics. Plant Pathology. 60 (1), pp. 44-53. https://doi.org/10.1111/j.1365-3059.2010.02413.x

Investigating altered triazole sensitivity in Rhynchosporium secalis

C2 - Non-edited contributions to conferences

Hawkins, N. D., Cools, H. J., Shaw, M. W., Sierotzki, H. and Fraaije, B. A. 2010. Investigating altered triazole sensitivity in Rhynchosporium secalis. American Phytopathological Society (APS).

The CYP51C gene, a novel marker for phylogenetic analysis of Fusarium species

C2 - Non-edited contributions to conferences

Fernandez-Ortuno, D., Loza-Reyes, E., Rogers, S. L. and Fraaije, B. A. 2010. The CYP51C gene, a novel marker for phylogenetic analysis of Fusarium species.

Succinate dehydrogenase inhibitor resistance risk assessment studies on Mycosphaerella graminicola the causal agent of septoria leaf blotch

C2 - Non-edited contributions to conferences

Bayon, C., Fraaije, M. W., Cools, H. J., Rogers, S. L., Lucas, J. A. and Fraaije, B. A. 2010. Succinate dehydrogenase inhibitor resistance risk assessment studies on Mycosphaerella graminicola the causal agent of septoria leaf blotch.

Derivation and validation of a model to predict selection for fungicide resistance

C2 - Non-edited contributions to conferences

Hobbelen, P. H., Paveley, N. D., Fraaije, B. A., Lucas, J. A. and Van Den Bosch, F. 2010. Derivation and validation of a model to predict selection for fungicide resistance.

Plant metabolomics applications in the Brassicaceae: added value for science and industry

C1 - Edited contributions to conferences/learned societies

Hall, R. D., De Vos, R. C. H. and Ward, J. L. 2010. Plant metabolomics applications in the Brassicaceae: added value for science and industry. International Society of Horticultural Science (ISHS).

A combined 1H nuclear magnetic resonance and electrospray ionization-mass spectrometry analysis to understand the basal metabolism of plant-pathogenic Fusarium spp

A - Papers appearing in refereed journals

Lowe, R. G. T., Allwood, J. W., Galster, A. M., Urban, M., Daudi, A., Canning, G., Ward, J. L., Beale, M. H. and Hammond-Kosack, K. E. 2010. A combined 1H nuclear magnetic resonance and electrospray ionization-mass spectrometry analysis to understand the basal metabolism of plant-pathogenic Fusarium spp. Molecular Plant-Microbe Interactions - MPMI. 23 (12), pp. 1605-1618. https://doi.org/10.1094/MPMI-04-10-0092

The CYP51C gene, a reliable marker to resolve interspecific phylogenetic relationships within the Fusarium species complex and a novel target for species-specific PCR

A - Papers appearing in refereed journals

Fernandez-Ortuno, D., Loza-Reyes, E., Atkins, S. L. and Fraaije, B. A. 2010. The CYP51C gene, a reliable marker to resolve interspecific phylogenetic relationships within the Fusarium species complex and a novel target for species-specific PCR. International Journal of Food Microbiology. 144, pp. 301-309. https://doi.org/10.1016/j.ijfoodmicro.2010.10.013

The use of metabolomic profiling to identify new quality determinants in wheat

C1 - Edited contributions to conferences/learned societies

Shewry, P. R., Millar, S. and Ward, J. L. 2010. The use of metabolomic profiling to identify new quality determinants in wheat. Branlard, G. (ed.) Gluten Proteins 2009: Proceedings of the 10th International Gluten Workshop, Clermont-Ferrand, 7-9 September 2009 . Institut National de la Recherche Agronomique (INRA), Paris. pp. 38-41

Prothioconazole binds to Mycosphaerella graminicola CYP51 by a different mechanism compared to other azole antifungals

C2 - Non-edited contributions to conferences

Parker, J. E., Warrilow, A., Cools, H. J., Martel, C. M., Nes, W. D., Fraaije, B. A., Lucas, J. A., Kelly, D. E. and Kelly, S. L. 2010. Prothioconazole binds to Mycosphaerella graminicola CYP51 by a different mechanism compared to other azole antifungals. Abstracts 10th International Symposium on Cytochrome P450 Biodiversity and Biotechnology, Woods Hole, 3-7 October 2010 .

Colletotrichum isolates related to anthracnose of cashew trees in Brazil: morphological and molecular description using LSU rDNA sequences

A - Papers appearing in refereed journals

Queijeiro Lopez, A. M. and Lucas, J. A. 2010. Colletotrichum isolates related to anthracnose of cashew trees in Brazil: morphological and molecular description using LSU rDNA sequences. Brazilian Archives Of Biology And Technology. 53, pp. 741-752. https://doi.org/10.1590/S1516-89132010000400001

CYP51 paralogues and azole fungicide sensitivity in Rhynchosporium secalis

C2 - Non-edited contributions to conferences

Hawkins, N. J., Cools, H. J., Sierotzki, H., Shaw, M. and Fraaije, B. A. 2010. CYP51 paralogues and azole fungicide sensitivity in Rhynchosporium secalis. Abstracts 10th International Symposium on Cytochrome P450 Biodiversity and Biotechnology, Woods Hole, 3-7 October 2010 .

Recent evolution of P450 sterol 14a-demethylase (CYP51) of the wheat pathogen Mycosphaerella graminicola in response to selection by azole fungicides

C2 - Non-edited contributions to conferences

Cools, H. J. 2010. Recent evolution of P450 sterol 14a-demethylase (CYP51) of the wheat pathogen Mycosphaerella graminicola in response to selection by azole fungicides. Abstracts 10th International Symposium on Cytochrome P450 Biodiversity and Biotechnology, Woods Hole, 3-7 October 2010 .

Functional analysis of folate polyglutamylation and its essential role in plant metabolism and development

A - Papers appearing in refereed journals

Mehrshahi, P., Gonzalez-Jorge, S., Akhtar, T. A., Ward, J. L., Santoyo-Castelazo, A., Marcus, S. E., Lara-Nunez, A., Ravanel, S., Hawkins, N. D., Beale, M. H., Barrett, D. A., Knox, J. P., Gregory, J. F. Iii, Hanson, A. D., Bennett, M. J. and Dellapenna, D. 2010. Functional analysis of folate polyglutamylation and its essential role in plant metabolism and development. The Plant Journal. 64, pp. 267-279. https://doi.org/10.1111/j.1365-313X.2010.04336.x

The HEALTHGRAIN wheat diversity screen: effects of genotype and environment on phytochemicals and dietary fiber components

A - Papers appearing in refereed journals

Shewry, P. R., Piironen, V., Lampi, A-M., Edelmann, M., Kariluoto, S., Nurmi, T., Fernandez-Orozco, R., Ravel, C., Charmet, G., Andersson, A. A. M., Aman, P., Boros, D., Gebruers, K., Dornez, E., Courtin, C. M., Delcour, J. A., Rakszegi, M., Bedo, Z. and Ward, J. L. 2010. The HEALTHGRAIN wheat diversity screen: effects of genotype and environment on phytochemicals and dietary fiber components. Journal of Agricultural and Food Chemistry - JAFC. 58, pp. 9291-9298. https://doi.org/10.1021/jf100039b

Effects of genotype and environment on the content and composition of phytochemicals and dietary fiber components in rye in the HEALTHGRAIN diversity screen

A - Papers appearing in refereed journals

Shewry, P. R., Piironen, V., Lampi, A-M., Edelmann, M., Kariluoto, S., Nurmi, T., Fernandez-Orozco, R., Andersson, A. A. M., Aman, P., Fras, A., Boros, D., Gebruers, K., Dornez, E., Courtin, C. M., Delcour, J. A., Ravel, C., Charmet, G., Rakszegi, M., Bedo, Z. and Ward, J. L. 2010. Effects of genotype and environment on the content and composition of phytochemicals and dietary fiber components in rye in the HEALTHGRAIN diversity screen. Journal of Agricultural and Food Chemistry - JAFC. 58, pp. 9372-9383. https://doi.org/10.1021/jf100053d

Effects of environment and genotype on phenolic acids in wheat in the HEALTHGRAIN diversity screen

A - Papers appearing in refereed journals

Fernandez-Orozco, R., Li, L., Harflett, C., Shewry, P. R. and Ward, J. L. 2010. Effects of environment and genotype on phenolic acids in wheat in the HEALTHGRAIN diversity screen. Journal of Agricultural and Food Chemistry - JAFC. 58, pp. 9341-9352. https://doi.org/10.1021/jf102017s

The metabolic transition during disease following infection of Arabidopsis thaliana by Pseudomonas syringae pv. tomato

A - Papers appearing in refereed journals

Ward, J. L., Forcat, S., Beckmann, M., Bennett, M., Miller, S. J., Baker, J. M., Hawkins, N. D., Vermeer, C. P., Lu, C., Lin, W., Truman, W. M., Beale, M. H., Draper, J., Mansfield, J. W. and Grant, M. 2010. The metabolic transition during disease following infection of Arabidopsis thaliana by Pseudomonas syringae pv. tomato. The Plant Journal. 63 (3), pp. 443-457. https://doi.org/10.1111/j.1365-313X.2010.04254.x

Enhancement of plant metabolite fingerprinting by machine learning

A - Papers appearing in refereed journals

Scott, I. M., Vermeer, C. P., Liakata, M., Corol, D. I., Ward, J. L., Lin, W., Johnson, H. E., Whitehead, L., Kular, B., Baker, J. M., Walsh, S., Dave, A., Larson, T. R., Graham, I. A., Wang, T. L., King, R. D., Draper, J. and Beale, M. H. 2010. Enhancement of plant metabolite fingerprinting by machine learning. Plant Physiology. 153, pp. 1506-1520. https://doi.org/10.1104/pp.109.150524

Reaction of dwarf cashew clones to Colletotrichum gloeosporioides isolates in controlled environment

A - Papers appearing in refereed journals

Queijeiro Lopez, A. M. and Lucas, J. A. 2010. Reaction of dwarf cashew clones to Colletotrichum gloeosporioides isolates in controlled environment. Scientia agricola. 67, pp. 228-235. https://doi.org/10.1590/S0103-90162010000200016

Molecular diagnostics for Napier Grass Stunt (NGS) and Napier Head Smut (NHS) diseases

C2 - Non-edited contributions to conferences

Lucas, J. A. and Arocha, Y. 2010. Molecular diagnostics for Napier Grass Stunt (NGS) and Napier Head Smut (NHS) diseases. Abstracts Regional ASARECA Workshop on Mitigating the Impact of Napier Grass Smut and Stunt Diseases for the Smallholder Dairy Sector: Sharing Results, Addis Ababa, 2-3 June 2010 .

Improving the benefits of wheat as a source of dietary fibre

B - Book chapters etc edited externally

Shewry, P. R., Saulnier, L., Guillon, F., Gebruers, K., Courtin, C., Delcour, J., Toole, G., Boros, D., Salse, J., Ravel, C., Mills, E. N. C., Ward, J. L. and Charmet, G. 2010. Improving the benefits of wheat as a source of dietary fibre. in: Jones, J., Topping, D., McCleary, B. and Vanderkamp, J. W. (ed.) Dietary fibre: new frontiers for food and health Wageningen Academic Publishers, Wageningen, Netherlands. pp. 65-78

Molecular mechanisms of altered fungicide sensitivity in Rhynchosporium secalis

C2 - Non-edited contributions to conferences

Hawkins, N. D., Cools, H. J., Shaw, M. W., Sierotzki, H. and Fraaije, B. A. 2010. Molecular mechanisms of altered fungicide sensitivity in Rhynchosporium secalis. Abstracts 16th International Reinhardsbrunn Symposium: Modern Fungicides and Antifungal Compounds, Friedrichroda, 25-29 April 2010 . pp. 50

Evolutionary bi-stability in pathogen transmission mode

A - Papers appearing in refereed journals

Van Den Bosch, F., Fraaije, B. A., Van Den Berg, F. and Shaw, M. W. 2010. Evolutionary bi-stability in pathogen transmission mode. Proceedings of the Royal Society of London Series B Biological Sciences. 277, pp. 1735-1742. https://doi.org/10.1098/rspb.2009.2211

Effects of DMI fungicides on selection of CYP51 variants in UK populations of Mycosphaerella graminicola

C2 - Non-edited contributions to conferences

Fraaije, B. A., Rogers, S., Bayon, C., Cools, H. J. and Lucas, J. A. 2010. Effects of DMI fungicides on selection of CYP51 variants in UK populations of Mycosphaerella graminicola. Abstracts 16th International Reinhardsbrunn Symposium: Modern Fungicides and Antifungal Compounds, Friedrichroda, 25-29 April 2010 . pp. 84

Development of QO1 resistance in Ramularia collocygni populations

C2 - Non-edited contributions to conferences

Fountaine, J. M., Burnett, F. J. and Fraaije, B. A. 2010. Development of QO1 resistance in Ramularia collocygni populations. Abstracts 16th International Reinhardsbrunn Symposium: Modern Fungicides and Antifungal Compounds, Friedrichroda, 25-29 April 2010 . pp. 136

The CYP51C gene, a novel and useful phylogenetic marker to distinguish different Fusarium species on cereals

C2 - Non-edited contributions to conferences

Fernandez-Ortuno, D., Loza-Reyes, E., Rogers, S. L. and Fraaije, B. A. 2010. The CYP51C gene, a novel and useful phylogenetic marker to distinguish different Fusarium species on cereals. Abstracts 16th International Reinhardsbrunn Symposium: Modern Fungicides and Antifungal Compounds, Friedrichroda, 25-29 April 2010 . pp. 196

Heterologous expression of mutated eburicol 14alpha-demethylase (CYP51) proteins of Mycosphaerella graminicola to assess effects on azole fungicide sensitivity and intrinsic protein function

A - Papers appearing in refereed journals

Cools, H. J., Parker, J. E., Kelly, D. E., Lucas, J. A., Fraaije, B. A. and Kelly, S. L. 2010. Heterologous expression of mutated eburicol 14alpha-demethylase (CYP51) proteins of Mycosphaerella graminicola to assess effects on azole fungicide sensitivity and intrinsic protein function. Applied and Environmental Microbiology. 76, pp. 2866-2872. https://doi.org/10.1128/AEM.02158-09

Functional characterisation of Mycosphaerella graminicola sterol 14alpha-demethylase (MgCYP51) variants resistant to azole fungicides

C2 - Non-edited contributions to conferences

Cools, H. J., Parker, J. E., Motteram, J., Kelly, D. E., Lucas, J. A., Rudd, J. J., Kelly, S. L. and Fraaije, B. A. 2010. Functional characterisation of Mycosphaerella graminicola sterol 14alpha-demethylase (MgCYP51) variants resistant to azole fungicides. Abstracts 16th International Reinhardsbrunn Symposium: Modern Fungicides and Antifungal Compounds, Friedrichroda, 25-29 April 2010 .

Future prospects for the analysis of bioactive components in cereal grain

G - Articles in popular magazines and other technical publications

Ward, J. L. and Shewry, P. R. 2010. Future prospects for the analysis of bioactive components in cereal grain. Cereal Foods World. 55, pp. 71-75. https://doi.org/10.1094/CFW-55-2-0071

An inter-laboratory comparison demonstrates that [1H]-NMR metabolite fingerprinting is a robust technique for collaborative plant metabolomic data collection

A - Papers appearing in refereed journals

Ward, J. L., Baker, J. M., Miller, S. J., Deborde, C., Maucourt, M., Biais, B., Rolin, D., Moing, A., Moco, S., Vervoort, J., Lommen, A., Schafer, H., Humpfer, E. and Beale, M. H. 2010. An inter-laboratory comparison demonstrates that [1H]-NMR metabolite fingerprinting is a robust technique for collaborative plant metabolomic data collection. Metabolomics. 6, pp. 263-273. https://doi.org/10.1007/s11306-010-0200-4

Transmission of phytoplasma associated with Bunchy Top Symptom of papaya by Empoasca papayae Oman

A - Papers appearing in refereed journals

Acosta Perez, K., Pinol, B., Arocha Rosete, Y., Wilson, M., Boa, E. and Lucas, J. A. 2010. Transmission of phytoplasma associated with Bunchy Top Symptom of papaya by Empoasca papayae Oman. Journal of Phytopathology. 158 (3), pp. 194-196. https://doi.org/10.1111/j.1439-0434.2009.01590.x

The role of seeds and airborne inoculum in the initiation of leaf blotch (Rhynchosporium secalis) epidemics in winter barley

A - Papers appearing in refereed journals

Fountaine, J. M., Shaw, M. W., Ward, E. and Fraaije, B. A. 2010. The role of seeds and airborne inoculum in the initiation of leaf blotch (Rhynchosporium secalis) epidemics in winter barley. Plant Pathology. 59 (2), pp. 330-337. https://doi.org/10.1111/j.1365-3059.2009.02213.x

Rynchosporium secalis: a historical perspective

C2 - Non-edited contributions to conferences

Atkins, S. D., King, K. M., Fraaije, B. A. and Newton, A. C. 2010. Rynchosporium secalis: a historical perspective. Proceedings Dundee Conference on Crop Protection in Northern Britain, Dundee, 23-24 February 2010 . pp. 103-108

The epidemiological importance of asymptomatic infection of winter barley by Rhynchosporium secalis and its consequences for crop protection and breeding

C2 - Non-edited contributions to conferences

Atkins, S. D., Fitt, B. D. L., Fraaije, B. A., Harvey, S., Lynott, J. and Newton, A. C. 2010. The epidemiological importance of asymptomatic infection of winter barley by Rhynchosporium secalis and its consequences for crop protection and breeding. Proceedings Dundee Conference on Crop Protection in Northern Britain, Dundee, 23-24 February 2010 . pp. 81-86

Future prospects for the analysis of bioactive components in cereal grain

B - Book chapters etc edited externally

Ward, J. L. and Shewry, P. R. 2010. Future prospects for the analysis of bioactive components in cereal grain. in: Shewry, P. R. and Ward, J. L. (ed.) HEALTHGRAIN methods: analysis of bioactive components in small grain cereals American Association of Cereal Chemists (AACC), St Paul, MN. pp. 273-280

HEALTHGRAIN methods: analysis of bioactive components in small grain cereals

E - Books edited/written by staff member, alone/with others

Shewry, P. R. and Ward, J. L. 2010. HEALTHGRAIN methods: analysis of bioactive components in small grain cereals. American Association of Cereal Chemists (AACC), St Paul, MN.

Identification and characterisation of Mycosphaerella graminicola secreted or surface-associated proteins with variable intragenic coding repeats

A - Papers appearing in refereed journals

Rudd, J. J., Antoniw, J. F., Marshall, R., Motteram, J., Fraaije, B. A. and Hammond-Kosack, K. E. 2010. Identification and characterisation of Mycosphaerella graminicola secreted or surface-associated proteins with variable intragenic coding repeats. Fungal Genetics and Biology. 47, pp. 19-32. https://doi.org/10.1016/j.fgb.2009.10.009

Comparative analyses of the abundance of Leptosphaeria maculans and L. biglobosa ascospores in air samples using traditional PCR and Real-Time PCR

B - Book chapters etc edited externally

Kaczmarek, J., Jedryczka, M., Irzykowski, W., Fitt, B. D. L., Lucas, J. A. and Latunde-Dada, A. O. 2009. Comparative analyses of the abundance of Leptosphaeria maculans and L. biglobosa ascospores in air samples using traditional PCR and Real-Time PCR. in: Kachlicki, P., Krajewski, P. and Naganowska, B. (ed.) Genetyka i genomika w doskonaleniu roslin uprawnych Instytut Genetyki Roslin PAN, Poznan. pp. 103-110

Pest wars - press paper

C2 - Non-edited contributions to conferences

Lucas, J. A., Field, L. M., Cools, H. J. and Hammond-Kosack, K. E. 2009. Pest wars - press paper. Pest Wars: British Science Festival, Guildford, 8 September 2009 .

System-wide molecular evidence for phenotypic buffering in Arabidopsis

A - Papers appearing in refereed journals

Fu, J., Keurentjes, J. J. B., Bouwmeester, H., America, T., Verstappen, F. W. A., Ward, J. L., Beale, M. H., De Vos, R. C. H., Dijkstra, M., Scheltema, R. A., Johannes, F., Koornneef, M., Vreugdenhil, D., Breitling, R. and Jansen, R. C. 2009. System-wide molecular evidence for phenotypic buffering in Arabidopsis. Nature Genetics. 41, pp. 166-167. https://doi.org/10.1038/ng.308

Molekularna detekcja inokulum pierwotnego chorobotworczych grzybow Leptosphaeria maculans i L. biglobosa w probach powietrza z regionu Dolnego Slaska [Molecular detection of the primary inoculum of the pathogenic fungi Leptosphaeria maculans and L. biglobosa in Lower Silesia air samples]

A - Papers appearing in refereed journals

Kaczmarek, J., Jedryczka, M., Fitt, B. D. L., Lucas, J. A. and Latunde-Dada, A. O. 2009. Molekularna detekcja inokulum pierwotnego chorobotworczych grzybow Leptosphaeria maculans i L. biglobosa w probach powietrza z regionu Dolnego Slaska [Molecular detection of the primary inoculum of the pathogenic fungi Leptosphaeria maculans and L. biglobosa in Lower Silesia air samples]. Rosliny Oleiste - Oilseed Crops. 30, pp. 9-20.

Sulphur nutrition differentially affects the distribution of asparagine in wheat grain

A - Papers appearing in refereed journals

Shewry, P. R., Zhao, F-J., Gowa, G. B., Hawkins, N. J., Ward, J. L., Beale, M. H., Halford, N. G., Parry, M. A. J. and Abecassis, J. 2009. Sulphur nutrition differentially affects the distribution of asparagine in wheat grain. Journal of Cereal Science. 50, pp. 407-409. https://doi.org/10.1016/j.jcs.2009.07.001

Evaluation of a predictive model for Mycosphaerella graminicola for economic and environmental benefits

A - Papers appearing in refereed journals

Te Beest, D. E., Shaw, M. W., Paveley, N. D. and Van Den Bosch, F. 2009. Evaluation of a predictive model for Mycosphaerella graminicola for economic and environmental benefits. Plant Pathology. 58 (6), pp. 1001-1009. https://doi.org/10.1111/j.1365-3059.2009.02142.x

Analyses of air samples for ascospores of Leptosphaeria maculans and L. biglobosa by light microscopy and molecular techniques

A - Papers appearing in refereed journals

Kaczmarek, J., Jedryczka, M., Fitt, B. D. L., Lucas, J. A. and Latunde-Dada, A. O. 2009. Analyses of air samples for ascospores of Leptosphaeria maculans and L. biglobosa by light microscopy and molecular techniques. Journal of Applied Genetics. 50 (4), pp. 411-419.

First report of 'Candidatus Phytoplasma asteris' (group 16SrI) infecting fruits and vegetables in Islamabad, Pakistan

A - Papers appearing in refereed journals

Fahmeed, F., Arocha, Y., Acosta Perez, K., Boa, E. and Lucas, J. A. 2009. First report of 'Candidatus Phytoplasma asteris' (group 16SrI) infecting fruits and vegetables in Islamabad, Pakistan. Journal of Phytopathology. 157 (10), pp. 639-641. https://doi.org/10.1111/j.1439-0434.2009.01549.x

First report of phytoplasmas affecting organoponic crops in central and eastern Cuba

A - Papers appearing in refereed journals

Arocha, Y., Pinol, B., Almeida, R., Acosta, K., Quinones, M., Zayas, T., Varela, M., Marrero, Y., Boa, E. and Lucas, J. A. 2009. First report of phytoplasmas affecting organoponic crops in central and eastern Cuba. Plant Pathology. 58 (4), p. 793. https://doi.org/10.1111/j.1365-3059.2009.02027.x

Drought stress increases the production of 5-hydroxynorvaline in two C4 grasses

A - Papers appearing in refereed journals

Carmo-Silva, A. E., Keys, A. J., Beale, M. H., Ward, J. L., Baker, J. M., Hawkins, N. D., Arrabaca, M. C. and Parry, M. A. J. 2009. Drought stress increases the production of 5-hydroxynorvaline in two C4 grasses. Phytochemistry. 70, pp. 664-671. https://doi.org/10.1016/j.phytochem.2009.03.001

Impact of proquinazid on appressorial development of the barley powdery mildew fungus Blumeria graminis f.sp hordei

A - Papers appearing in refereed journals

Gilbert, S. R., Cools, H. J., Fraaije, B. A., Bailey, A. M. and Lucas, J. A. 2009. Impact of proquinazid on appressorial development of the barley powdery mildew fungus Blumeria graminis f.sp hordei. Pesticide Biochemistry and Physiology. 94, pp. 127-132. https://doi.org/10.1016/j.pestbp.2009.04.011

Climate change impacts and opportunities in agriculture

C2 - Non-edited contributions to conferences

Lucas, J. A. 2009. Climate change impacts and opportunities in agriculture. Abstracts International Workshop on Physics and Chemistry of Climate Change and Entrepreneurship, Sao Paulo, 26-27 February 2009 .

Identification of potential vectors and alternative plant hosts for the phytoplasma associated with napier grass stunt disease in Ethiopia

A - Papers appearing in refereed journals

Arocha, Y., Zerfy, T., Abebe, G., Proud, J., Hanson, J., Wilson, M., Jones, P. and Lucas, J. A. 2009. Identification of potential vectors and alternative plant hosts for the phytoplasma associated with napier grass stunt disease in Ethiopia. Journal of Phytopathology. 157 (2), pp. 126-132. https://doi.org/10.1111/j.1439-0434.2008.01432.x

Metabolomic and phenotypic analyses of Fusarium graminearum wild-type and mutant strains

C2 - Non-edited contributions to conferences

Urban, M., Lowe, R., Allwood, W., Ward, J. L., Beale, M. H. and Hammond-Kosack, K. E. 2008. Metabolomic and phenotypic analyses of Fusarium graminearum wild-type and mutant strains.

Understanding fungicide mixtures to control Rhynchosporium in barley and minimise resistance shifts. HGCA Project Report No. 436

D1 - Technical reports: non-confidential

Oxley, S. J. P., Burnett, F., Hunter, E,. A., Fraaije, B. A., Cooke, L. R., Mercer, P. C. and Gilchrist, A. 2008. Understanding fungicide mixtures to control Rhynchosporium in barley and minimise resistance shifts. HGCA Project Report No. 436. Home Grown Cereals Authority (HGCA) London.

The final straw: crop archives and the recent history of cereal pathosystems

C1 - Edited contributions to conferences/learned societies

Lucas, J. A. and Fraaije, B. A. 2008. The final straw: crop archives and the recent history of cereal pathosystems. Jellis, G. and Edwards, C. (ed.) Cereal pathosystems: papers from BSPP Presidential Meeting, London, 16-17 December 2008 . Home Grown Cereals Authority (HGCA) London. pp. 103-115

Plant pathology in Europe: present status, impact and future challenges

C2 - Non-edited contributions to conferences

Lucas, J. A. 2008. Plant pathology in Europe: present status, impact and future challenges.

Adaptation of Mycosphaerella graminicola populations to azole fungicides in the UK

C1 - Edited contributions to conferences/learned societies

Fraaije, B. A., Cools, H. J., Motteram, J., Gilbert, S. R., Kim, S-H. and Lucas, J. A. 2008. Adaptation of Mycosphaerella graminicola populations to azole fungicides in the UK. Deising, H. B., Lyr, H., Russell, P. E., Kuck, K. H., Gisi, U. and Dehne, H. W. (ed.) Modern Fungicides and Antifungal Compounds V: Proceedings 15th International Reinhardsbrunn Symposium on Modern Fungicides and Antifungal Compounds, 2007 . Deutsche Phytomedizinische Gesellschaft, Braunschweig. pp. 121-127

Re-contructing evolution of fungicide resistance and disease dynamics of cereal pathogens from crop archives

C2 - Non-edited contributions to conferences

Fraaije, B. A. 2008. Re-contructing evolution of fungicide resistance and disease dynamics of cereal pathogens from crop archives.

Testing of fungicide activity enhancers using Septoria leaf blotch as model. Confidential report to industrial sponsor

D1 - Technical reports: non-confidential

Bean, T. P. and Fraaije, B. A. 2008. Testing of fungicide activity enhancers using Septoria leaf blotch as model. Confidential report to industrial sponsor.

Expression of genes encoding efflux proteins in Mycosphaerella graminicola isolates with sensitive or reduced triazole sensitivity phenotypes

C1 - Edited contributions to conferences/learned societies

Bean, T. P., Cools, H. J., Lucas, J. A. and Fraaije, B. A. 2008. Expression of genes encoding efflux proteins in Mycosphaerella graminicola isolates with sensitive or reduced triazole sensitivity phenotypes. Deising, H. B., Lyr, H., Russell, P. E., Kuck, K. H., Gisi, U. and Dehne, H. W. (ed.) Modern Fungicides and Antifungal Compounds V: Proceedings 15th International Reinhardsbrunn Symposium on Modern Fungicides and Antifungal Compounds, 2007 . Deutsche Phytomedizinische Gesellschaft, Braunschweig. pp. 93-99

Improving wheat for nutrition and processing

C1 - Edited contributions to conferences/learned societies

Shewry, P. R., Wan, Y., Wheeler, T., Gooding, M., Poole, R., Edwards, K. J., Mills, E. N. C., Skeggs, P., Gezan, S., Welham, S. J., Shenton, C., Zhu, T., Phillips, A. L., Jones, H. D., Li, L., Ward, J. L., Freeman, J., Nemeth, C. and Mitchell, R. A. C. 2008. Improving wheat for nutrition and processing. Molinacano, J. L. (ed.) Cereal Science and Technology for Feeding Ten Billion People: Genomics Era and Beyond. Proceedings of the Meeting of the Eucarpia Cereal Section, Lleida (Spain), 13-17 November 2006 . Options Mediterraneennes, Series A, No 81. pp. 249-252

Population structures of global isolate collections of Leptosphaeria maculans and L. biglobosa , the causal organsims of phoma stem canker and stem lesions on oilseed rape

C2 - Non-edited contributions to conferences

Latunde-Dada, A. O., Liu, Z., Downes, K., Fitt, B. D. L., Lucas, J. A. and Crute, I. R. 2008. Population structures of global isolate collections of Leptosphaeria maculans and L. biglobosa , the causal organsims of phoma stem canker and stem lesions on oilseed rape. Abstracts BSPP Presidential Meeting on Cereal Pathosystems, London, 16-17 December 2008 .

Apical leaf necrosis as a defence mechanism against pathogen attack: effects of high nutrient availability on onset and rate of necrosis

A - Papers appearing in refereed journals

Van Den Berg, F., Van Den Bosch, F., Powers, S. J. and Shaw, M. W. 2008. Apical leaf necrosis as a defence mechanism against pathogen attack: effects of high nutrient availability on onset and rate of necrosis. Plant Pathology. 57 (6), pp. 1009-1016. https://doi.org/10.1111/j.1365-3059.2008.01865.x

Establishing substantial equivalence: metabolomics

B - Book chapters etc edited externally

Beale, M. H., Ward, J. L. and Baker, J. M. 2008. Establishing substantial equivalence: metabolomics. in: Shewry, P. R. and Jones, H. D. (ed.) Transgenic wheat, barley and oats. Methods in molecular biology, vol.478 Humana Press, New York. pp. 289-303

Asymptomatic infection of winter and spring barley by Rhynchosporium secalis: effects and implications for epidemiology and host resistance

C2 - Non-edited contributions to conferences

Atkins, S. D., Stonard, J. F., Fraaije, B. A., Lucas, J. A., Fitt, B. D. L. and Newton, A. C. 2008. Asymptomatic infection of winter and spring barley by Rhynchosporium secalis: effects and implications for epidemiology and host resistance. Abstracts 10th International Barley Genetics Symposium (IBGS), Alexandria, 5-10 April 2008 .

The dynamics of Rynchosporium secalis in winter and spring barley and the role of inoculum sources

C2 - Non-edited contributions to conferences

Atkins, S. D., Fraaije, B. A., Lucas, J. A. and Fitt, B. D. L. 2008. The dynamics of Rynchosporium secalis in winter and spring barley and the role of inoculum sources.

The HEALTHGRAIN cereal diversity screen: concept, results and prospects

A - Papers appearing in refereed journals

Ward, J. L., Poutanen, K., Gebruers, K., Piironen, V., Lampi, A-M., Nystrom, L., Andersson, A. A. M., Aman, P., Boros, D., Rakszegi, M., Bedo, Z. and Shewry, P. R. 2008. The HEALTHGRAIN cereal diversity screen: concept, results and prospects. Journal of Agricultural and Food Chemistry - JAFC. 56 (21), pp. 9699-9709. https://doi.org/10.1021/jf8009574

Phytochemical and fiber components in oat varieties in the HEALTHGRAIN diversity screen

A - Papers appearing in refereed journals

Shewry, P. R., Piironen, V., Lampi, A-M., Nystrom, L., Li, L., Rakszegi, M., Fras, A., Boros, D., Gebruers, K., Courtin, C. M., Delcour, J. A., Andersson, A. A. M., Dimberg, L., Bedo, Z. and Ward, J. L. 2008. Phytochemical and fiber components in oat varieties in the HEALTHGRAIN diversity screen. Journal of Agricultural and Food Chemistry - JAFC. 56, pp. 9777-9784. https://doi.org/10.1021/jf801880d

Phytochemicals and dietary fiber components in rye varieties in the HEALTHGRAIN diversity screen

A - Papers appearing in refereed journals

Nystrom, L., Lampi, A-M., Andersson, A. A. M., Kamal-Eldin, A., Gebruers, K., Courtin, C. M., Delcour, J. A., Li, L., Ward, J. L., Fras, A., Boros, D., Rakszegi, M., Bedo, Z., Shewry, P. R. and Piironen, V. 2008. Phytochemicals and dietary fiber components in rye varieties in the HEALTHGRAIN diversity screen. Journal of Agricultural and Food Chemistry - JAFC. 56, pp. 9758-9766. https://doi.org/10.1021/jf801065r

Phenolic acids in wheat varieties in the HEALTHGRAIN diversity screen

A - Papers appearing in refereed journals

Li, L., Shewry, P. R. and Ward, J. L. 2008. Phenolic acids in wheat varieties in the HEALTHGRAIN diversity screen. Journal of Agricultural and Food Chemistry - JAFC. 56, pp. 9732-9739. https://doi.org/10.1021/jf801069s

Phytochemical and dietary fiber components in barley varieties in the HEALTHGRAIN diversity screen

A - Papers appearing in refereed journals

Andersson, A. A. M., Lampi, A-M., Nystrom, L., Piironen, V., Li, L., Ward, J. L., Gebruers, K., Courtin, C. M., Delcour, J. A., Boros, D., Fras, A., Dynkowska, W., Rakszegi, M., Bedo, Z., Shewry, P. R. and Aman, P. 2008. Phytochemical and dietary fiber components in barley varieties in the HEALTHGRAIN diversity screen. Journal of Agricultural and Food Chemistry - JAFC. 56, pp. 9767-9776. https://doi.org/10.1021/jf802037f

Quantitative measurements of CYP51 alterations in populations of Mycosphaerella graminicola using pyrosequencing

C2 - Non-edited contributions to conferences

Motteram, J., Cools, H. J., Gilbert, S. and Fraaije, B. A. 2008. Quantitative measurements of CYP51 alterations in populations of Mycosphaerella graminicola using pyrosequencing.

Investigating wheat functionality through breeding and end use (FQS 23)

D1 - Technical reports: non-confidential

Millar, S. J., Snape, J., Ward, J. L., Shewry, P. R., Belton, P., Boniface, K. and Summers, R. 2008. Investigating wheat functionality through breeding and end use (FQS 23). Campden and Chorleywood Food Research Association, Chipping Campden.

Dispersal of airborne spores from plant pahtogenic fungi in cereals

C2 - Non-edited contributions to conferences

Havis, N., Fraaije, B. A. and Oxley, S. 2008. Dispersal of airborne spores from plant pahtogenic fungi in cereals.

Confidential report to Makhteshim Agan (UK) Ltd

D1 - Technical reports: non-confidential

Fraaije, B. A. 2008. Confidential report to Makhteshim Agan (UK) Ltd.

Demethylation inhibitor resistance in cereal pathogens and consequences of resistance management

C2 - Non-edited contributions to conferences

Fraaije, B. A., Cools, H. J., Motteram, J. and Lucas, J. A. 2008. Demethylation inhibitor resistance in cereal pathogens and consequences of resistance management.

Characterisation of mechanisms correlated with reduced azole sensitivity in Mycosphaerella graminicola

C2 - Non-edited contributions to conferences

Cools, H. J., Fraaije, B. A., Bean, T. P. and Lucas, J. A. 2008. Characterisation of mechanisms correlated with reduced azole sensitivity in Mycosphaerella graminicola.

Impact of mutations in the CYP51 gene of Mycosphaerella graminicola on azole fungicide sensitivity and intrinsic protein function

C2 - Non-edited contributions to conferences

Cools, H. J., Fraaije, B. A., Fernandez-Ortuno, D., Bean, T. P. and Lucas, J. A. 2008. Impact of mutations in the CYP51 gene of Mycosphaerella graminicola on azole fungicide sensitivity and intrinsic protein function. Abstracts 7th International Mycosphaerella and Stagonospora Symposium, Ascona, 18-22 August 2008 .

Co-ordinated expression of amino acid metabolism in response to N and S deficiency during wheat grain filling

A - Papers appearing in refereed journals

Howarth, J. R., Parmar, S., Jones, J., Shepherd, C. E., Corol, D. I., Galster, A. M., Hawkins, N. D., Miller, S. J., Baker, J. M., Verrier, P. J., Ward, J. L., Beale, M. H., Barraclough, P. B. and Hawkesford, M. J. 2008. Co-ordinated expression of amino acid metabolism in response to N and S deficiency during wheat grain filling. Journal of Experimental Botany. 59, pp. 3675-3689. https://doi.org/10.1093/jxb/ern218

Long-term dynamics in wheat of Phaeosphaeria nodorum and Mycosphaerella graminicola

C2 - Non-edited contributions to conferences

Shaw, M. W., Bearchell, S. J., Fitt, B. D. L. and Fraaije, B. A. 2008. Long-term dynamics in wheat of Phaeosphaeria nodorum and Mycosphaerella graminicola.

The sensitivity of photosynthesis to phosphorus deficiency differs between C3 and C4 tropical grasses

A - Papers appearing in refereed journals

Ghannoum, O., Paul, M. J., Ward, J. L., Beale, M. H., Corol, D. I. and Conroy, J. P. 2008. The sensitivity of photosynthesis to phosphorus deficiency differs between C3 and C4 tropical grasses. Functional Plant Biology. 35, pp. 213-221. https://doi.org/10.1071/FP07256

Changes in fungicide sensitivity and relative species abundance in Oculimaculata yallundae and O. acuformis populations (eyespot disease of cereals) in Western Europe

A - Papers appearing in refereed journals

Parnell, S., Gilligan, C. A., Lucas, J. A., Bock, C. H. and Van Den Bosch, F. 2008. Changes in fungicide sensitivity and relative species abundance in Oculimaculata yallundae and O. acuformis populations (eyespot disease of cereals) in Western Europe. Plant Pathology. 57 (3), pp. 509-517. https://doi.org/10.1111/j.1365-3059.2007.01786.x

Basic compatibility of Albugo candida in Arabidopsis thaliana and Brassica juncea causes broad spectrum suppression of innate immunity

A - Papers appearing in refereed journals

Cooper, A. J., Latunde-Dada, A. O., Woods-Tor, A., Lynn, J., Lucas, J. A., Crute, I. R. and Holub, E. B. 2008. Basic compatibility of Albugo candida in Arabidopsis thaliana and Brassica juncea causes broad spectrum suppression of innate immunity. Molecular Plant-Microbe Interactions - MPMI. 21, pp. 745-756. https://doi.org/10.1094/MPMI-21-6-0745

Controlling Septoria: can azole fungicides be relied upon?

G - Articles in popular magazines and other technical publications

Fraaije, B. A., Cools, H. J., Clark, B. and Lucas, J. A. 2008. Controlling Septoria: can azole fungicides be relied upon? RRA Newsletter. 26, p. 3.

Disease-weather relationships for powdery mildew and yellow rust on winter wheat

A - Papers appearing in refereed journals

Te Beest, D. E., Paveley, N. D., Shaw, M. W. and Van Den Bosch, F. 2008. Disease-weather relationships for powdery mildew and yellow rust on winter wheat. Phytopathology. 98 (5), pp. 609-617. https://doi.org/10.1094/PHYTO-98-5-0609

Are azole fungicides losing ground against Septoria wheat disease? Resistance mechanisms in Mycosphaerella graminicola

A - Papers appearing in refereed journals

Cools, H. J. and Fraaije, B. A. 2008. Are azole fungicides losing ground against Septoria wheat disease? Resistance mechanisms in Mycosphaerella graminicola. Pest Management Science. 64 (7), pp. 681-684. https://doi.org/10.1002/ps.1568

Long-term relationships between environment and abundance of wheat of Phaeosphaeria nodorum and Mycosphaerella graminicola

A - Papers appearing in refereed journals

Shaw, M. W., Bearchell, S. J., Fitt, B. D. L. and Fraaije, B. A. 2008. Long-term relationships between environment and abundance of wheat of Phaeosphaeria nodorum and Mycosphaerella graminicola. New Phytologist. 177 (1), pp. 229-238. https://doi.org/10.1111/j.1469-8137.2007.02236.x

Molecular mechanisms associated with altered azole sensitivity in Mycosphaerella graminicola

C1 - Edited contributions to conferences/learned societies

Cools, H. J., Bean, T. P., Motteram, J., Gilbert, S. R. and Fraaije, B. A. 2007. Molecular mechanisms associated with altered azole sensitivity in Mycosphaerella graminicola. Proceedings 16th International Plant Protection Congress, Glasgow, 15-18 October 2007 . pp. 406-407

Phenotypic and metabolomic analyses of the Fusarium graminearum SNF1 mutant

C2 - Non-edited contributions to conferences

Urban, M., Antoniw, J. F., Allwood, W., Beacham, A., Ward, J. L., Beale, M. H. and Hammond-Kosack, K. E. 2007. Phenotypic and metabolomic analyses of the Fusarium graminearum SNF1 mutant. Abstracts 13th International Congress on Molecular Plant-Microbe Interactions, Sorrento, 21-27 July 2007 . pp. 212

Evolution of fungicide resistance in UK populations of Mycosphaerella graminicola

C2 - Non-edited contributions to conferences

Fraaije, B. A. 2007. Evolution of fungicide resistance in UK populations of Mycosphaerella graminicola. Abstracts Resistance 2007, Harpenden, 16-18 April 2007 .

DON mycotoxin biosynthesis by Fusarium species, a metabolomics perspective

C2 - Non-edited contributions to conferences

Lowe, R., Allwood, J. W., Urban, M., Beale, M. H., Ward, J. L. and Hammond-Kosack, K. E. 2007. DON mycotoxin biosynthesis by Fusarium species, a metabolomics perspective. Abstracts BSPP Presidential Meeting 2007: Attack and Defence in Plant Disease, Bath, 12-14 September 2007 . pp. 64

Minimum reporting standards for plant biology context information in metabolomic studies

A - Papers appearing in refereed journals

Fiehn, O., Sumner, L. W., Rhee, S. Y., Ward, J. L., Dickerson, J., Lange, B. M., Lane, G., Roessner, U., Last, R. and Nikolau, B. 2007. Minimum reporting standards for plant biology context information in metabolomic studies. Metabolomics. 3, pp. 195-201. https://doi.org/10.1007/s11306-007-0068-0

Effects of a strobilurin-based spray programme on disease control, green leaf area, yield and development of fungicide-resistance in Mycosphaerella graminicola in Northern Ireland

A - Papers appearing in refereed journals

Mccartney, C., Mercer, P. C., Cooke, L. R. and Fraaije, B. A. 2007. Effects of a strobilurin-based spray programme on disease control, green leaf area, yield and development of fungicide-resistance in Mycosphaerella graminicola in Northern Ireland. Crop Protection. 26, pp. 1272-1280. https://doi.org/10.1016/j.cropro.2006.10.027

Transcriptome profiling of the response of Mycosphaerella graminicola isolates to an azole fungicide using cDNA microarrays

A - Papers appearing in refereed journals

Cools, H. J., Fraaije, B. A., Bean, T. P., Antoniw, J. F. and Lucas, J. A. 2007. Transcriptome profiling of the response of Mycosphaerella graminicola isolates to an azole fungicide using cDNA microarrays. Molecular Plant Pathology. 8 (5), pp. 639-651. https://doi.org/10.1111/J.1364-3703.2007.00411.X

Dynamics of fungicide resistant alleles in field populations of Mycosphaerella graminicola

C2 - Non-edited contributions to conferences

Fraaije, B. A. 2007. Dynamics of fungicide resistant alleles in field populations of Mycosphaerella graminicola.

Molecular mechanisms correlated with reduced azole sensitivity in Mycosphaerella graminicola

C2 - Non-edited contributions to conferences

Cools, H. J. 2007. Molecular mechanisms correlated with reduced azole sensitivity in Mycosphaerella graminicola.

Sterol content analysis of Mycosphaerella graminicola isolates with reduced sensitivity to triazole fungicides

C2 - Non-edited contributions to conferences

Bean, T. P., Cools, H. J., Fraaije, B. A. and Lucas, J. A. 2007. Sterol content analysis of Mycosphaerella graminicola isolates with reduced sensitivity to triazole fungicides.

Localized hemibiotrophy in Colletotrichum: cytological and molecular taxonomic similarities among C. destructivum, C. linicola and C. truncatum

A - Papers appearing in refereed journals

Latunde-Dada, A. O. and Lucas, J. A. 2007. Localized hemibiotrophy in Colletotrichum: cytological and molecular taxonomic similarities among C. destructivum, C. linicola and C. truncatum. Plant Pathology. 56 (3), pp. 437-447. https://doi.org/10.1111/j.1365-3059.2007.01576.x

Comparison of Leptosphaeria biglobosa- induced and chemically induced systemic resistance to L. maculans in Brassica napus

A - Papers appearing in refereed journals

Liu, S-Y., Liu, R-H., Latunde-Dada, A. O., Cools, H. J., Foster, S. J., Huang, Y-J. and Fitt, B. D. L. 2007. Comparison of Leptosphaeria biglobosa- induced and chemically induced systemic resistance to L. maculans in Brassica napus. Chinese Science Bulletin. 52, pp. 1053-1062. https://doi.org/10.1007/s11434-007-0181-5

A novel substitution 1381V in the sterol 14alpha-demethylase (CYP51) of Mycosphaerella graminicola is differentially selected by azole fungicides

A - Papers appearing in refereed journals

Fraaije, B. A., Cools, H. J., Kim, S-H., Motteram, J., Clark, W. S. and Lucas, J. A. 2007. A novel substitution 1381V in the sterol 14alpha-demethylase (CYP51) of Mycosphaerella graminicola is differentially selected by azole fungicides. Molecular Plant Pathology. 8 (3), pp. 245-254. https://doi.org/10.1111/j.1364-3703.2007.00388.X

Apical leaf necrosis and leaf nitrogen dynamics in diseased leaves: a model study

A - Papers appearing in refereed journals

Van Den Berg, F., Robert, C., Shaw, M. W. and Van Den Bosch, F. 2007. Apical leaf necrosis and leaf nitrogen dynamics in diseased leaves: a model study. Plant Pathology. 56 (3), pp. 424-436. https://doi.org/10.1111/j.1365-3059.2007.01565.x

Are GM and conventionally bred cereals really different?

A - Papers appearing in refereed journals

Shewry, P. R., Baudo, M., Lovegrove, A., Powers, S. J., Napier, J. A., Ward, J. L., Baker, J. M. and Beale, M. H. 2007. Are GM and conventionally bred cereals really different? Trends in Food Science and Technology. 18, pp. 201-209. https://doi.org/10.1016/j.tifs.2006.12.010

Application of real-time and multiplex polymerase chain reaction assays to study leaf blotch epidemics in barley

A - Papers appearing in refereed journals

Fountaine, J. M., Shaw, M. W., Napier, B., Ward, E. and Fraaije, B. A. 2007. Application of real-time and multiplex polymerase chain reaction assays to study leaf blotch epidemics in barley. Phytopathology. 97, pp. 297-303. https://doi.org/10.1094/PHYTO-97-0297

Recent applications of NMR spectroscopy in plant metabolomics

A - Papers appearing in refereed journals

Ward, J. L., Baker, J. M. and Beale, M. H. 2007. Recent applications of NMR spectroscopy in plant metabolomics. The FEBS Journal. 274 (5), pp. 1126-1131. https://doi.org/10.1111/j.1742-4658.2007.05675.x

Transcriptional adaptation of Mycosphaerella graminicola to programmed cell death (PCD) of its susceptible wheat host

A - Papers appearing in refereed journals

Keon, J. P. R., Antoniw, J. F., Carzaniga, R., Deller, S., Ward, J. L., Baker, J. M., Beale, M. H., Hammond-Kosack, K. E. and Rudd, J. J. 2007. Transcriptional adaptation of Mycosphaerella graminicola to programmed cell death (PCD) of its susceptible wheat host. Molecular Plant-Microbe Interactions - MPMI. 20 (2), pp. 178-193. https://doi.org/10.1094/MPMI-20-2-0178

Effects of Strobilurin fungicides on control of Septoria tritici blotch, green leaf area and yield of winter wheat in the light of fungicide resistance in Northern Ireland

C1 - Edited contributions to conferences/learned societies

Mccartney, C., Mercer, P. C., Cooke, L. R. and Fraaije, B. A. 2006. Effects of Strobilurin fungicides on control of Septoria tritici blotch, green leaf area and yield of winter wheat in the light of fungicide resistance in Northern Ireland. Fungicide Resistance: Are We Wiining the Battle but Losing the War? Aspects of Applied Biology 78 . pp. 71

Methods to detect fungicide resistance: from broth dilution to real-time PCR

C1 - Edited contributions to conferences/learned societies

Fraaije, B. A. and Cools, H. J. 2006. Methods to detect fungicide resistance: from broth dilution to real-time PCR. Fungicide Resistance: Are We Winning the Battle but Losing the War? Aspects of Applied Biology 78 . pp. 11-15

DMI resistance: an overview

C2 - Non-edited contributions to conferences

Fraaije, B. A. 2006. DMI resistance: an overview. Abstracts 11th IUPAC International Congress of Pesticide Chemistry, Kobe, 6-11 August 2006 . pp. 60

Fungicide resistance management strategies, using barley mildew as a model

C1 - Edited contributions to conferences/learned societies

Burnett, F. J., Clark, W. S., Fraaije, B. A. and Lucas, J. A. 2006. Fungicide resistance management strategies, using barley mildew as a model. Fungicide Resistance: Are We Winning the Battle but Losing the War? Aspects of Applied Biology 78 . pp. 83-89

Integration of molecular diagnostics and air sampling to study plant pathogens

C2 - Non-edited contributions to conferences

West, J. S., Fraaije, B. A., Motteram, J., Rogers, S. L., Lacey, M. E. and Lucas, J. A. 2006. Integration of molecular diagnostics and air sampling to study plant pathogens. Abstracts 8th International Congress on Aerobiology, Neuchatel, 21-25 August 2006 . pp. 260

Transcriptional adaptation of Mycosphaerella graminicola to programmed cell death (PCD) of its susceptible wheat host

C2 - Non-edited contributions to conferences

Keon, J. P. R., Antoniw, J. F., Carzaniga, R., Deller, S., Ward, J. L., Baker, J. M., Beale, M. H., Hammond-Kosack, K. E. and Rudd, J. J. 2006. Transcriptional adaptation of Mycosphaerella graminicola to programmed cell death (PCD) of its susceptible wheat host. Abstracts 3rd COGEME Interest Group Meeting, Manchester, 7-8 November 2006 .

Transcriptome profiling of the response of Mycosphaerella graminicola isolates to triazole fungicides using cDNA microarrays

C2 - Non-edited contributions to conferences

Cools, H. J., Antoniw, J. F. and Fraaije, B. A. 2006. Transcriptome profiling of the response of Mycosphaerella graminicola isolates to triazole fungicides using cDNA microarrays. Abstracts 11th IUPAC International Congress of Pesticide Chemistry, Kobe, 6-11 August 2006 . pp. 140

Transcriptome profiling of the response of Mycosphaerella graminicola isolates to triazole fungicides using cDNA microarrays

C2 - Non-edited contributions to conferences

Cools, H. J., Antoniw, J. F., Bean, T. P. and Fraaije, B. A. 2006. Transcriptome profiling of the response of Mycosphaerella graminicola isolates to triazole fungicides using cDNA microarrays. Abstracts 3rd COGEME Interest Group Meeting, Manchester, 7-8 November 2006 . pp. 28

Evolution of azole resistance mechanisms in UK populations of Mycosphaerella graminicola

C1 - Edited contributions to conferences/learned societies

Cools, H. J. and Fraaije, B. A. 2006. Evolution of azole resistance mechanisms in UK populations of Mycosphaerella graminicola. Fungicide Resistance: Are We Winning the Battle but Losing the War? Aspects of Applied Biology 78 . pp. 21-27

In planta expression analysis in Mycosphaerella graminicola of genes encoding efflux proteins

C2 - Non-edited contributions to conferences

Bean, T. P., Cools, H. J., Fraaije, B. A. and Lucas, J. A. 2006. In planta expression analysis in Mycosphaerella graminicola of genes encoding efflux proteins. Asbtracts APS CPS MSA Joint Meeting on Plant Pathology at the Biological Crossroads, Quebec, 29 July-2 August 2006 . pp. 11

Application of quantitative real-time PCR to monitor Rynchosporium secalis in barley cultivars

C2 - Non-edited contributions to conferences

Atkins, S. D., Fountaine, J. M., Fitt, B. D. L. and Fraaije, B. A. 2006. Application of quantitative real-time PCR to monitor Rynchosporium secalis in barley cultivars. Abstracts International Workshop on Barley Leaf Blights, Edmonton, 23-27 July 2006 .

Formulating an early-warning model for Septoria tritici

C2 - Non-edited contributions to conferences

Te Beest, D. E., Pietravalle, S., Shaw, M. W. and Van Den Bosch, F. 2006. Formulating an early-warning model for Septoria tritici. Cambridge University Press (CUP). https://doi.org/10.1017/S0021859606006290

Impact of changes in the target P450 CYP51 enzyme associated with altered triazole-sensitivity in fungal pathogens of cereal crops

A - Papers appearing in refereed journals

Cools, H. J., Fraaije, B. A., Kim, S. H. and Lucas, J. A. 2006. Impact of changes in the target P450 CYP51 enzyme associated with altered triazole-sensitivity in fungal pathogens of cereal crops. Biochemical Society Transactions. 34 (6), pp. 1219-1222. https://doi.org/10.1042/BST0341219

A metabolomic study of substantial equivalence of field-grown genetically modified wheat

A - Papers appearing in refereed journals

Baker, J. M., Hawkins, N. D., Ward, J. L., Lovegrove, A., Napier, J. A., Shewry, P. R. and Beale, M. H. 2006. A metabolomic study of substantial equivalence of field-grown genetically modified wheat. Plant Biotechnology Journal. 4 (4), pp. 381-392. https://doi.org/10.1111/j.1467-7652.2006.00197.x

Resistance to Leptosphaeria maculans (phoma stem canker) in Brassica napus (oilseed rape) induced by L. biglobosa and chemical defence activators in field and controlled environments

A - Papers appearing in refereed journals

Liu, S. Y., Liu, Z., Fitt, B. D. L., Evans, N., Foster, S. J., Huang, Y. J., Latunde-Dada, A. O. and Lucas, J. A. 2006. Resistance to Leptosphaeria maculans (phoma stem canker) in Brassica napus (oilseed rape) induced by L. biglobosa and chemical defence activators in field and controlled environments. Plant Pathology. 55 (3), pp. 401-412. https://doi.org/10.1111/j.1365-3059.2006.01354.x

Exploring appressorial formation in the cereal biotroph powdery mildew

C2 - Non-edited contributions to conferences

Gilbert, S. R., Fraaije, B. A., Bailey, A., Cools, H. J. and Lucas, J. A. 2006. Exploring appressorial formation in the cereal biotroph powdery mildew. Abstracts 8th European Conference on Fungal Genetics, Vienna, 8-11 April 2006 . pp. 165

Development and field testing of fungicide anti-resistance strategies, with particular reference to strobilurin QoI group of fungicides. (HGCA Project Report No. 392)

D1 - Technical reports: non-confidential

Fraaije, B. A., Burnett, F. J., Clark, W. S. and Lucas, J. A. 2006. Development and field testing of fungicide anti-resistance strategies, with particular reference to strobilurin QoI group of fungicides. (HGCA Project Report No. 392). Home Grown Cereals Authority (HGCA) London.

Enhanced seed phytosterol accumulation through expression of a modified HMG-CoA reductase

A - Papers appearing in refereed journals

Hey, S. J., Powers, S. J., Beale, M. H., Hawkins, N. D., Ward, J. L. and Halford, N. G. 2006. Enhanced seed phytosterol accumulation through expression of a modified HMG-CoA reductase. Plant Biotechnology Journal. 4 (2), pp. 219-229. https://doi.org/10.1111/j.1467-7652.2005.00174.x

Chickpea wilt: identification and toxicity of 8-0 -methyl-fusarubin from Fusarium acutatum

A - Papers appearing in refereed journals

Gopalakrishnan, S., Beale, M. H., Ward, J. L. and Strange, R. N. 2005. Chickpea wilt: identification and toxicity of 8-0 -methyl-fusarubin from Fusarium acutatum. Phytochemistry. 66, pp. 1536-1539. https://doi.org/10.1016/j.phytochem.2005.04.037

QoI resistance in cereal pathogens: the European experience

C2 - Non-edited contributions to conferences

Lucas, J. A. 2005. QoI resistance in cereal pathogens: the European experience. Abstracts American Phytopathological Society Annual Meeting, Austin, 30 July-3 August 2005 .

Testing an experimental fungicide for in vitro activity against Mycosphaerella graminicola (anamorph Septoria tritici ) (Confidential report for Cropsolution Inc)

D1 - Technical reports: non-confidential

Lucas, J. A., Bean, T., Cools, H. J. and Fraaije, B. A. 2005. Testing an experimental fungicide for in vitro activity against Mycosphaerella graminicola (anamorph Septoria tritici ) (Confidential report for Cropsolution Inc).

Exploring appressorial formation in the biotrophic cereal fungus powdery mildew

C2 - Non-edited contributions to conferences

Gilbert, S., Cools, H. J., Fraaije, B. A., Bailey, A. and Lucas, J. A. 2005. Exploring appressorial formation in the biotrophic cereal fungus powdery mildew. Abstracts 23rd Fungal Genetics Conference, Asilomar, 15-20 March 2005 . pp. 177

The role of ascospores in further spread of QoI-resistant cytochrome b alleles (G143A) in field populations of Mycosphaerella graminicola

A - Papers appearing in refereed journals

Fraaije, B. A., Cools, H. J., Fountaine, J., Lovell, D. J., Motteram, J., West, J. S. and Lucas, J. A. 2005. The role of ascospores in further spread of QoI-resistant cytochrome b alleles (G143A) in field populations of Mycosphaerella graminicola. Phytopathology. 95 (8), pp. 933-941. https://doi.org/10.1094/PHYTO-95-0933

QoI resistance in Mycosphaerella graminicola : role of inoculum, effect of different anti-resistance strategies and current status in the UK

C2 - Non-edited contributions to conferences

Fraaije, B. A., Burnett, F., Clark, W., Motteram, J. and Lucas, J. A. 2005. QoI resistance in Mycosphaerella graminicola : role of inoculum, effect of different anti-resistance strategies and current status in the UK. Abstracts American Phytopathological Society Annual Meeting, Austin, 30 July-3 August 2005 .

Resistance development to QoI inhibitors in populations of Mycosphaerella graminicola in the UK

C1 - Edited contributions to conferences/learned societies

Fraaije, B. A., Burnett, F. J., Clark, W. S., Motteram, J. and Lucas, J. A. 2005. Resistance development to QoI inhibitors in populations of Mycosphaerella graminicola in the UK. Dehne, H-W., Lyr, H., Russell, P. E., Kuck, K. H. and Gisi, U. (ed.) Modern Fungicides and Antifungal Compounds IV: Proceedings of the 14th International Reinhardsbrunn Symposium, Friedrichroda, 25-29 April 2004 . British Crop Protection Council (BCPC). pp. 63-71

Molecular examination of Septoria tritici isolates with reduced sensitivities to triazoles

C1 - Edited contributions to conferences/learned societies

Cools, H. J., Fraaije, B. A. and Lucas, J. A. 2005. Molecular examination of Septoria tritici isolates with reduced sensitivities to triazoles. Dehne, H-W., Lyr, H., Russell, P. E., Kuck, K. H. and Gisi, U. (ed.) Modern Fungicides and Antifungal Compounds IV: Proceedings of the 14th International Reinhardsbrunn Symposium, Friedrichroda, 25-29 April 2004 . British Crop Protection Council (BCPC). pp. 103-114

Molecular mechanisms correlated with changes in triazole sensitivity in isolates of Mycosphaerella graminicola

C1 - Edited contributions to conferences/learned societies

Cools, H. J., Fraaije, B. A. and Lucas, J. A. 2005. Molecular mechanisms correlated with changes in triazole sensitivity in isolates of Mycosphaerella graminicola. Proceedings BCPC International Congress - Crop Science and Technology, Glasgow, 31 October-2 November 2005 . pp. 267-274

Using cDNA microarrays to profile the response of Mycosphaerella graminicola to triazole fungicides

C2 - Non-edited contributions to conferences

Cools, H. J., Fraaije, B. A., Keon, J. P. R., Antoniw, J. F. and Lucas, J. A. 2005. Using cDNA microarrays to profile the response of Mycosphaerella graminicola to triazole fungicides. Abstracts COGEME Interest Group Meeting, Manchester, 8-9 November 2005 .

Agrobacterium tumefaciens-mediated transformation of Leptosphaeria app. and Oculimacula spp. with the reef coral gene DsRed and the jellyfish gene gfp

A - Papers appearing in refereed journals

Eckert, M., Maguire, K. L., Urban, M., Foster, S. J., Fitt, B. D. L., Lucas, J. A. and Hammond-Kosack, K. E. 2005. Agrobacterium tumefaciens-mediated transformation of Leptosphaeria app. and Oculimacula spp. with the reef coral gene DsRed and the jellyfish gene gfp. FEMS Microbiology Letters. 253, pp. 67-74. https://doi.org/10.1016/j.femsle.2005.09.041

Bioassay-led isolation of Myrothecium verrucaria and verrucarin A as germination inhibitors of Orobanche crenata

A - Papers appearing in refereed journals

El-Kassas, R., Karam El-Din, Z., Beale, M. H., Ward, J. L. and Strange, R. N. 2005. Bioassay-led isolation of Myrothecium verrucaria and verrucarin A as germination inhibitors of Orobanche crenata. Weed Research. 45 (3), pp. 212-219. https://doi.org/10.1111/j.1365-3180.2005.00448.x

Integration of spore trapping with molecular techniques to enhance epidemiological studies

C2 - Non-edited contributions to conferences

West, J. S., McCartney, H. A., Fountaine, J., Fraaije, B. A., Lee, I. K. and Lucas, J. A. 2005. Integration of spore trapping with molecular techniques to enhance epidemiological studies. Abstracts 9th International Workshop on Plant Disease Epidemiology, Rennes, 10-15 April 2005 . pp. 65

Wheat archive links long-term fungal pathogen population dynamics to air pollution

A - Papers appearing in refereed journals

Bearchell, S. J., Fraaije, B. A., Shaw, M. W. and Fitt, B. D. L. 2005. Wheat archive links long-term fungal pathogen population dynamics to air pollution. Proceedings of the National Academy of Sciences. 102 (15), pp. 5438-5442. https://doi.org/10.1073/pnas.0501596102

Strobilurin resistance in Septoria tritici in the UK. (HGCA topic sheet No. 69)

G - Articles in popular magazines and other technical publications

Clark, W. and Fraaije, B. A. 2005. Strobilurin resistance in Septoria tritici in the UK. (HGCA topic sheet No. 69).

Metabolite profiling of GM plants: the importance of robust experimental design and execution

B - Book chapters etc edited externally

Lewis, J., Baker, J. M., Beale, M. H. and Ward, J. L. 2004. Metabolite profiling of GM plants: the importance of robust experimental design and execution. in: Stiekema, W. J., Atanassov, A. and Nap, J. P. H. (ed.) Genomics for biosafety in plant biotechnology IOS Press, Amsterdam. pp. 47-57

Lipid utilization, gluconeogenesis and seedling growth in Arabidopsis mutants lacking the glyoxylate cycle enzyme malate synthase

A - Papers appearing in refereed journals

Cornah, J. E., Germain, V., Ward, J. L., Beale, M. H. and Smith, S. M. 2004. Lipid utilization, gluconeogenesis and seedling growth in Arabidopsis mutants lacking the glyoxylate cycle enzyme malate synthase. Journal of Biological Chemistry. 279 (41), pp. 42916-42923. https://doi.org/10.1074/jbc.M407380200

Leptosphaeria biglobosa can induce higher resistance of Brassica napus to Phoma stem canker by triggering earlier JA/ET pathway and stronger SA pathway both locally and systematically

C2 - Non-edited contributions to conferences

Liu, R., Liu, S., Fitt, B. D. L., Cools, H. J., Latunde-Dada, A. O., Huang, Y-J., Li, Z. and Lucas, J. A. 2004. Leptosphaeria biglobosa can induce higher resistance of Brassica napus to Phoma stem canker by triggering earlier JA/ET pathway and stronger SA pathway both locally and systematically. Abstracts Discovery, Development and Delivery in Plant Pathology: 7th Conference of the European Foundation for Plant Pathology and BSPP Presidential Meeting 2004, Aberdeen, 5-10 September 2004 . pp. 38

Survival, surfaces and susceptibility - the sensory biology of pathogens. (British Society for Plant Pathology presidential address 2003)

A - Papers appearing in refereed journals

Lucas, J. A. 2004. Survival, surfaces and susceptibility - the sensory biology of pathogens. (British Society for Plant Pathology presidential address 2003). Plant Pathology. 53 (6), pp. 679-691. https://doi.org/10.1111/j.1365-3059.2004.01106.x

Molecular mechanisms conferring reduced sensitivities to triazoles in UK isolates of Septoria tritici

C2 - Non-edited contributions to conferences

Cools, H. J., Fraaije, B. A. and Lucas, J. A. 2004. Molecular mechanisms conferring reduced sensitivities to triazoles in UK isolates of Septoria tritici.

Evolution of QoI resistance in populations of Mycosphaerella graminocola

C2 - Non-edited contributions to conferences

Fraaije, B. A. and Lucas, J. A. 2004. Evolution of QoI resistance in populations of Mycosphaerella graminocola.

Induction of infection plaques in Oculimacula spp. the cereal eyespot fungi

C2 - Non-edited contributions to conferences

Maguire, K., Dickinson, M., Bowyer, P., Perrone, S., Lucas, J. A. and Hammond-Kosack, K. E. 2004. Induction of infection plaques in Oculimacula spp. the cereal eyespot fungi. Abstracts 7th European Conference on Fungal Genetics, Copenhagen, 17-20 April 2004 .

Plant pathogens: how can molecular genetic information on plant pathogens assist in breeding disease resistant crops

C1 - Edited contributions to conferences/learned societies

Hammond-Kosack, K. E., Urban, M., Baldwin, T., Daudi, A., Rudd, J. J., Keon, J., Lucas, J. A., Magiure, K., Kornyukhin, D., Jing, H-C., Bass, C. G. and Antoniw, J. F. 2004. Plant pathogens: how can molecular genetic information on plant pathogens assist in breeding disease resistant crops. Fischer, T. (ed.) New Directions for a Diverse Planet: Proceedings 4th International Crop Science Congress, Brisbane, 26 September-1 October 2004 . Regional Institute, Gosford. pp. www.cropscience.org.au

Plant pathogen diagnostics: immunological and nucleic acid-based approaches

A - Papers appearing in refereed journals

Ward, E., Foster, S. J., Fraaije, B. A. and McCartney, H. A. 2004. Plant pathogen diagnostics: immunological and nucleic acid-based approaches. Annals of Applied Biology - AAB. 145 (1), pp. 1-16. https://doi.org/10.1111/j.1744-7348.2004.tb00354.x

Introduction: crop protection science at IACR

A - Papers appearing in refereed journals

Crute, I. R., Denholm, I., Kerry, B. R., Lucas, J. A. and Pickett, J. A. 2003. Introduction: crop protection science at IACR. Pest Management Science. 59 (2), pp. 125-127. https://doi.org/10.1002/ps.621

Regulation of infection plaque formation in Tapesia spp. the cereal eyespot fungi

C2 - Non-edited contributions to conferences

Maguire, K., Dickinson, M., Bowyer, P., Lucas, J. A. and Hammond-Kosack, K. E. 2003. Regulation of infection plaque formation in Tapesia spp. the cereal eyespot fungi. Abstracts BSPP Presidential Meeting 2003: Plant Pathogen Genomics - from Sequence to Application, Nottingham, 15-18 December 2003 . pp. 42-43

A potential role for volatile signals in plant-fungal interactions

C2 - Non-edited contributions to conferences

Latunde-Dada, A. O., Rassmussen, H., Pickett, J. A. and Lucas, J. A. 2003. A potential role for volatile signals in plant-fungal interactions. Abstracts 8th International Congress of Plant Pathology, Christchurch, 2-7 February 2003 .

Short cicuiting photorespiration

C2 - Non-edited contributions to conferences

Parry, M. A. J., Carvalho, J. F. C., Madgwick, P. J., Keys, A. J., Lea, P. J., Beale, M. H. and Ward, J. L. 2003. Short cicuiting photorespiration. Abstracts ASPB Annual Meeting Plant Biology 2003, Honolulu, 25-30 July 2003 . pp. Abs 379

Short circuiting photorespiration

C2 - Non-edited contributions to conferences

Parry, M. A. J., Madgwick, P. J., Keys, A. J., Carvalho, J. F. C., Lea, P. J., Beale, M. H. and Ward, J. L. 2003. Short circuiting photorespiration. Abstracts ASPB Annual Meeting Plant Biology 2003, Honolulu, 25-30 July 2003 . pp. Abs 18002

Plant-fungal interactions mediated by volatile signals

C1 - Edited contributions to conferences/learned societies

Lucas, J. A. 2003. Plant-fungal interactions mediated by volatile signals. Proceedings BCPC International Congress - Crop Science and Technology, Glasgow, 10-12 November 2003 . pp. 1145-1148

Peduncle rot of dwarf wheat caused by Rhizoctonia cerealis

G - Articles in popular magazines and other technical publications

Lovell, D. J., Parker, S. R., Baldwin, S. and Fraaije, B. A. 2003. Peduncle rot of dwarf wheat caused by Rhizoctonia cerealis. Plant Health Progress. July 2003, p. http://www.plantmanagementnetwork.org/.

QoI resistance development in populations of cereal pathogens in the UK

C1 - Edited contributions to conferences/learned societies

Fraaije, B. A., Lucas, J. A., Clark, W. S. and Burnett, F. J. 2003. QoI resistance development in populations of cereal pathogens in the UK. Proceedings BCPC International Congress - Crop Science and Technology, Glasgow, 10-12 November 2003 . pp. 689-694

Menadione sodium bisulphite: a novel plant defence activator which enhances local and systemic resistance to infection by Leptosphaeria maculans in oilseed rape

A - Papers appearing in refereed journals

Borges, A. A., Cools, H. J. and Lucas, J. A. 2003. Menadione sodium bisulphite: a novel plant defence activator which enhances local and systemic resistance to infection by Leptosphaeria maculans in oilseed rape. Plant Pathology. 52 (4), pp. 429-436. https://doi.org/10.1046/j.1365-3059.2003.00877.x

Assessment of 1H NMR spectroscopy and multivariate analysis as a technique for metabolite fingerprinting of Arabidopsis thaliana

A - Papers appearing in refereed journals

Ward, J. L., Harris, C., Lewis, J. and Beale, M. H. 2003. Assessment of 1H NMR spectroscopy and multivariate analysis as a technique for metabolite fingerprinting of Arabidopsis thaliana. Phytochemistry. 62, pp. 949-957.

Resistance to QoI fungicides: implications for cereal disease management in Europe

A - Papers appearing in refereed journals

Lucas, J. A. 2003. Resistance to QoI fungicides: implications for cereal disease management in Europe. Pesticide Outlook. 14, pp. 268-270.

Modeling of relationships between weather and Septoria tritici epidemics on winter wheat: a critical approach

A - Papers appearing in refereed journals

Pietravalle, S., Shaw, M. W., Parker, S. R. and Van Den Bosch, F. 2003. Modeling of relationships between weather and Septoria tritici epidemics on winter wheat: a critical approach. Phytopathology. 93 (10), pp. 1329-1339. https://doi.org/10.1094/PHYTO.2003.93.10.1329

Identification of novel targets for the control of eyespot disease of cereals caused by Tapesia spp

C2 - Non-edited contributions to conferences

Maguire, K., Dickinson, M., Lucas, J. A. and Bowyer, P. 2003. Identification of novel targets for the control of eyespot disease of cereals caused by Tapesia spp. Abstracts SCI Meeting on Advances in Fungal Control Strategies, Jealotts Hill, 29 April 2003 .

Interactions between the grasses Phalaris arundinacea, Miscanthus sinensis and Echinochloa crus-galli , and Barley and Cereal yellow dwarf viruses

A - Papers appearing in refereed journals

Lamptey, J. N. L., Plumb, R. T. and Shaw, M. W. 2003. Interactions between the grasses Phalaris arundinacea, Miscanthus sinensis and Echinochloa crus-galli , and Barley and Cereal yellow dwarf viruses. Journal of Phytopathology. 151 (42954), pp. 463-468. https://doi.org/10.1046/j.1439-0434.2003.00752.x

Molecular diagnostics for fungal plant pathogens

A - Papers appearing in refereed journals

McCartney, H. A., Foster, S. J., Fraaije, B. A. and Ward, E. 2003. Molecular diagnostics for fungal plant pathogens. Pest Management Science. 59 (2), pp. 129-142. https://doi.org/10.1002/ps.575

Resistance in wheat powdery mildew to strobilurin fungicides: effects of dose rate, frequency and mixtures (Final report to Defra on project PT0226)

D1 - Technical reports: non-confidential

Fraaije, B. A. 2002. Resistance in wheat powdery mildew to strobilurin fungicides: effects of dose rate, frequency and mixtures (Final report to Defra on project PT0226).

A chemical defence activator primes cowpea seedlings for rapid induction of resistance to anthracnose caused by Colletotrichum destructivum

C1 - Edited contributions to conferences/learned societies

Latunde-Dada, A. O. and Lucas, J. A. 2002. A chemical defence activator primes cowpea seedlings for rapid induction of resistance to anthracnose caused by Colletotrichum destructivum. Biodiversity in Plant Pathology. Proceedings 5th Congress of the European Foundation for Plant Pathology, Taormina, Italy, 18-22 September 2000 . SIPV, Pisa. pp. 349-352

Septoria epidemics on wheat: combined use of visual assessment and PCR-based diagnostics to identify mechanisms of disease escape

C1 - Edited contributions to conferences/learned societies

Fraaije, B. A., Lovell, D. J. and Baldwin, S. 2002. Septoria epidemics on wheat: combined use of visual assessment and PCR-based diagnostics to identify mechanisms of disease escape.

Towards an early warning system for winter wheat disease severity

C1 - Edited contributions to conferences/learned societies

Pietravalle, S., Van Den Bosch, F., Shaw, M. W. and Parker, S. R. 2002. Towards an early warning system for winter wheat disease severity. Proceedings Brighton Crop Protection Conference - Pests and Diseases, 2002 . pp. 897-902

Effects of plant defence activators on anthracnose disease of cashew

A - Papers appearing in refereed journals

Lopez, A. M. Q. and Lucas, J. A. 2002. Effects of plant defence activators on anthracnose disease of cashew. European Journal of Plant Pathology. 108, pp. 409-420.

Following the dynamics of strobilurin resistance in Blumeria graminis f.sp. tritici using quantitative allele-specific real-time PCR measurements with the fluorescent dye SYBR Green 1

A - Papers appearing in refereed journals

Fraaije, B. A., Butters, J. A., Coelho, J. M., Jones, D. R. and Hollomon, D. W. 2002. Following the dynamics of strobilurin resistance in Blumeria graminis f.sp. tritici using quantitative allele-specific real-time PCR measurements with the fluorescent dye SYBR Green 1. Plant Pathology. 51 (1), pp. 45-54. https://doi.org/10.1046/j.0032-0862.2001.00650.x

Pre-treatment of cucumber plants with acibenzolar-S-methyl systemically primes a phenylalanine ammonia lyase gene (PAL1 ) for enhanced expression upon attack with a pathogenic fungus

A - Papers appearing in refereed journals

Cools, H. J. and Ishii, H. 2002. Pre-treatment of cucumber plants with acibenzolar-S-methyl systemically primes a phenylalanine ammonia lyase gene (PAL1 ) for enhanced expression upon attack with a pathogenic fungus. Physiological and Molecular Plant Pathology. 61, pp. 273-280.

Identification and transmission of Piper yellow mottle virus and Cucumber mosaic virus infecting black pepper (Piper nigrum ) in Sri Lanka

A - Papers appearing in refereed journals

De Silva, D. P. P., Jones, P. and Shaw, M. W. 2002. Identification and transmission of Piper yellow mottle virus and Cucumber mosaic virus infecting black pepper (Piper nigrum ) in Sri Lanka. Plant Pathology. 51 (5), pp. 537-545. https://doi.org/10.1046/j.0032-0862.2002.00757.x

Cloning and sequence analysis of the eburicol 14alpha-demethylase encoding gene (CYP51 ) from the Japanese pear scab fungus Venturia nashicola

A - Papers appearing in refereed journals

Cools, H. J., Ishii, H., Butters, J. A. and Hollomon, D. W. 2002. Cloning and sequence analysis of the eburicol 14alpha-demethylase encoding gene (CYP51 ) from the Japanese pear scab fungus Venturia nashicola. Journal of Phytopathology. 150 (42986), pp. 444-450. https://doi.org/10.1046/j.1439-0434.2002.00776.x

Evidence of recombination between net- and spot-type populations of Pyrenophora teres as determined by RAPD analysis

A - Papers appearing in refereed journals

Campbell, G. F., Lucas, J. A. and Crous, P. W. 2002. Evidence of recombination between net- and spot-type populations of Pyrenophora teres as determined by RAPD analysis. Mycological Research. 106, pp. 602-608.

Synthesis of (2E )-4-hydroxy-3-methylbut-2-enyl diphosphate, a key intermediate in the biosynthesis of isoprenoids

A - Papers appearing in refereed journals

Ward, J. L. and Beale, M. H. 2002. Synthesis of (2E )-4-hydroxy-3-methylbut-2-enyl diphosphate, a key intermediate in the biosynthesis of isoprenoids. Journal of the Chemical Society-Perkin Transactions 1. 2002, pp. 710-712.

Quantitative PCR monitoring of the effect of azoxystrobin treatments on Mycosphaerella graminicola epidemics in the field

A - Papers appearing in refereed journals

Rohel, E. A., Laurent, P., Fraaije, B. A., Cavelier, N. and Hollomon, D. W. 2002. Quantitative PCR monitoring of the effect of azoxystrobin treatments on Mycosphaerella graminicola epidemics in the field. Pest Management Science. 58 (3), pp. 248-254. https://doi.org/10.1002/ps.431

Probing the mechanism of loss of carbon-20 in gibberellin biosynthesis. Synthesis of gibberellin 3alpha,20-hemiacetal and 19,20-lactol analogues and their metabolism by a recombinant GA 20-oxidase

A - Papers appearing in refereed journals

Ward, J. L., Gaskin, P., Brown, R. G. S., Jackson, G. S., Hedden, P., Phillips, A. L., Willis, C. L. and Beale, M. H. 2002. Probing the mechanism of loss of carbon-20 in gibberellin biosynthesis. Synthesis of gibberellin 3alpha,20-hemiacetal and 19,20-lactol analogues and their metabolism by a recombinant GA 20-oxidase. Journal of the Chemical Society-Perkin Transactions 1. 2002, pp. 232-241.

Cloning of the CYP51 gene from the eyespot pathogen Tapesia yallundae indicates that resistance to the DMI fungicide prochloraz is not related to sequence changes in the gene encoding the target site enzyme

A - Papers appearing in refereed journals

Wood, H. M., Dickinson, M. J., Lucas, J. A. and Dyer, P. S. 2001. Cloning of the CYP51 gene from the eyespot pathogen Tapesia yallundae indicates that resistance to the DMI fungicide prochloraz is not related to sequence changes in the gene encoding the target site enzyme. FEMS Microbiology Letters. 196, pp. 183-187. https://doi.org/10.1111/j.1574-6968.2001.tb10562.x

The plant defence activator acibenzolar-S-methyl primes cowpea (Vigna unguiculata (L.) Walp.) seedlings for rapid induction of resistance

A - Papers appearing in refereed journals

Latunde-Dada, A. O. and Lucas, J. A. 2001. The plant defence activator acibenzolar-S-methyl primes cowpea (Vigna unguiculata (L.) Walp.) seedlings for rapid induction of resistance. Physiological and Molecular Plant Pathology. 58, pp. 199-208.

Occurrence and molecular characterization of strobilurin resistance in cucumber powdery mildew and downy mildew

A - Papers appearing in refereed journals

Ishii, H., Fraaije, B. A., Sugiyama, T., Noguchi, K., Nishimura, K., Takeda, T., Amano, T. and Hollomon, D. W. 2001. Occurrence and molecular characterization of strobilurin resistance in cucumber powdery mildew and downy mildew. Phytopathology. 91, pp. 1166-1171. https://doi.org/https://doi.org/10.1094/PHYTO.2001.91.12.1166

PCR-based assays to assess wheat varietal resistance to blotch (Septoria tritici and Stagonospora nododrum ) and rust (Puccinia striiformis and Puccinia recondita) diseases

A - Papers appearing in refereed journals

Fraaije, B. A., Lovell, D. J., Coelho, J. M., Baldwin, S. and Hollomon, D. W. 2001. PCR-based assays to assess wheat varietal resistance to blotch (Septoria tritici and Stagonospora nododrum ) and rust (Puccinia striiformis and Puccinia recondita) diseases. European Journal of Plant Pathology. 107, pp. 905-917. https://doi.org/10.1023/A:1013119206261

Exploring infection of wheat and carbohydrate metabolism in Mycosphaerella graminocola transformants with differentially regulated green fluorescent protein expression

A - Papers appearing in refereed journals

Rohel, E. A., Payne, A. C., Fraaije, B. A. and Hollomon, D. W. 2001. Exploring infection of wheat and carbohydrate metabolism in Mycosphaerella graminocola transformants with differentially regulated green fluorescent protein expression. Molecular Plant-Microbe Interactions - MPMI. 14 (2), pp. 156-163. https://doi.org/10.1094/MPMI.2001.14.2.156

Novel DNA diagnostic technology in plant disease control using Septoria tritici as a model. (HGCA Project Report No. 245)

D1 - Technical reports: non-confidential

Fraaije, B. A. and Hollomon, D. W. 2001. Novel DNA diagnostic technology in plant disease control using Septoria tritici as a model. (HGCA Project Report No. 245). Home Grown Cereals Authority (HGCA) London.

Genetic control of resistance to the sterol 14alpha- demethylase inhibitor fungicide prochloraz in the cereal eyespot pathogen Tapesia yallundae

A - Papers appearing in refereed journals

Dyer, P. S., Hansen, J., Delaney, A. and Lucas, J. A. 2000. Genetic control of resistance to the sterol 14alpha- demethylase inhibitor fungicide prochloraz in the cereal eyespot pathogen Tapesia yallundae. Applied and Environmental Microbiology. 66, pp. 4599-4604.

In planta genotyping of Erysiphe graminis f. sp. tritici isolates for strobilurin-resistance using a fluorometric allele-specific PCR assay

C1 - Edited contributions to conferences/learned societies

Fraaije, B. A., Butters, J. A. and Hollomon, D. W. 2000. In planta genotyping of Erysiphe graminis f. sp. tritici isolates for strobilurin-resistance using a fluorometric allele-specific PCR assay. Proceedings AFPP 6th International Conference on Plant Diseases, Tours, 6-8 December 2000 . pp. 779-786

In planta genotyping of Erysiphe graminis f. sp. tritici isolates for strobilurin-resistance using a fluorometric allele-specific PCR assay

C1 - Edited contributions to conferences/learned societies

Fraaije, B. A., Butters, J. A. and Hollomon, D. W. 2000. In planta genotyping of Erysiphe graminis f. sp. tritici isolates for strobilurin-resistance using a fluorometric allele-specific PCR assay. Proceedings Brighton Crop Protection Conference - Pests and Diseases, 2000 . pp. 401-406

Resistance to plant diseases

C1 - Edited contributions to conferences/learned societies

Lucas, J. A. and Hollomon, D. W. 2000. Resistance to plant diseases. Predicting Field Performance in Crop Protection. BCPC Symposium Proceedings No. 74 . British Crop Protection Council (BCPC). pp. 155-161

Pathogenicity, host-specificity and population biology of Tapesia spp., causal agents of eyespot disease of cereals

A - Papers appearing in refereed journals

Lucas, J. A., Dyer, P. S. and Murray, T. D. 2000. Pathogenicity, host-specificity and population biology of Tapesia spp., causal agents of eyespot disease of cereals. Advances in botanical research. 33, pp. 225-258. https://doi.org/10.1016/S0065-2296(00)33044-0

Use of an isocitrate lyase promoter-GFP fusion to monitor carbon metabolism of the plant pathogen Tapesia yallundae during infection of wheat

A - Papers appearing in refereed journals

Bowyer, P., Mueller, E. and Lucas, J. A. 2000. Use of an isocitrate lyase promoter-GFP fusion to monitor carbon metabolism of the plant pathogen Tapesia yallundae during infection of wheat. Molecular Plant Pathology. 1, pp. 253-262.

Infection of linseed by Alternaria linicola ; effects of inoculum density, temperature, leaf wetness and light regime

A - Papers appearing in refereed journals

Vloutoglou, I., Fitt, B. D. L. and Lucas, J. A. 1999. Infection of linseed by Alternaria linicola ; effects of inoculum density, temperature, leaf wetness and light regime. European Journal of Plant Pathology. 105, pp. 585-595.

Caged plant growth regulators

B - Book chapters etc edited externally

Allan, A. C., Ward, J. L., Beale, M. H. and Trewavas, A. J. 1998. Caged plant growth regulators. in: Marriott, G. (ed.) Methods in Enzymology Vol. 291. Caged Compounds Academic Press, San Diego.

Impact and epidemiology of barley yellow dwarf luteovirus on some biomass crops in the UK

G - Articles in popular magazines and other technical publications

Lamptey, J. N. L., Plumb, R. T. and Shaw, M. W. 1997. Impact and epidemiology of barley yellow dwarf luteovirus on some biomass crops in the UK. Barley Yellow Dwarf Newsletter. 6, pp. 19-20.

Somatic embryogenesis and plant regeneration in Floribunda rose (Rosa hybrida L.) cvs Trumpeter and Glad Tidings

A - Papers appearing in refereed journals

Marchant, R., Davey, M. R., Lucas, J. A. and Power, J. B. 1996. Somatic embryogenesis and plant regeneration in Floribunda rose (Rosa hybrida L.) cvs Trumpeter and Glad Tidings. Plant Science. 120, pp. 95-105.

Aetiology and control of black pepper (Piper nigrum L.) yellow mottle virus disease

A - Papers appearing in refereed journals

De Silva, D. P. P., Jones, P. and Shaw, M. W. 1996. Aetiology and control of black pepper (Piper nigrum L.) yellow mottle virus disease. Tropical Agricultural Research. 8, pp. 401-411.

Germination of Alternaria linicola conidia on linseed: effects of temperature, incubation time, leaf wetness and light regime

A - Papers appearing in refereed journals

Vloutoglou, I., Fitt, B. D. L. and Lucas, J. A. 1996. Germination of Alternaria linicola conidia on linseed: effects of temperature, incubation time, leaf wetness and light regime. Plant Pathology. 45 (3), pp. 529-539. https://doi.org/10.1046/j.1365-3059.1996.d01-2.x

The reliability of visual estimates of disease severity on cereal leaves

A - Papers appearing in refereed journals

Parker, S. R., Shaw, M. W. and Royle, D. J. 1995. The reliability of visual estimates of disease severity on cereal leaves. Plant Pathology. 44 (5), pp. 856-864. https://doi.org/10.1111/j.1365-3059.1995.tb02745.x

Barley yellow dwarf luteovirus (BYDV) infection of grasses grown for biomass

C2 - Non-edited contributions to conferences

Lamptey, J. N. L., Plumb, R. T. and Shaw, M. W. 1995. Barley yellow dwarf luteovirus (BYDV) infection of grasses grown for biomass. Abstracts 7th Conference on Virus Diseases of Poaceae in Europe, Versailles, 1995 .

Survival and seed to seedling transmission of Alternaria linicola on linseed

A - Papers appearing in refereed journals

Vloutoglou, I., Fitt, B. D. L. and Lucas, J. A. 1995. Survival and seed to seedling transmission of Alternaria linicola on linseed. Annals of Applied Biology - AAB. 127 (1), pp. 33-47. https://doi.org/10.1111/j.1744-7348.1995.tb06649.x

Periodicity and gradients in dispersal of Alternaria linicola in linseed crops

A - Papers appearing in refereed journals

Vloutoglou, I., Fitt, B. D. L. and Lucas, J. A. 1995. Periodicity and gradients in dispersal of Alternaria linicola in linseed crops. European Journal of Plant Pathology. 101, pp. 639-653.

Early development of light leaf spot (Pyrenopeziza brassicae) on winter oilseed rape (Brassica napus) in relation to temperature and leaf wetness

A - Papers appearing in refereed journals

Figueroa, L., Fitt, B. D. L., Welham, S. J., Shaw, M. W. and McCartney, H. A. 1995. Early development of light leaf spot (Pyrenopeziza brassicae) on winter oilseed rape (Brassica napus) in relation to temperature and leaf wetness. Plant Pathology. 44 (4), pp. 641-654. https://doi.org/10.1111/j.1365-3059.1995.tb01688.x

Predicting early development of light leaf spot (Pyrenopeziza brassicae) on winter oilseed rape

C1 - Edited contributions to conferences/learned societies

Gladders, P., Fitt, B. D. L., Figueroa, L., McCartney, H. A., Shaw, M. W. and Welham, S. J. 1995. Predicting early development of light leaf spot (Pyrenopeziza brassicae) on winter oilseed rape.

Effects of temperature on the development of light leaf spot (Pyrenopeziza brassicae) on oilseed rape (Brassica napus)

A - Papers appearing in refereed journals

Figueroa, L., Fitt, B. D. L., Shaw, M. W., McCartney, H. A. and Welham, S. J. 1995. Effects of temperature on the development of light leaf spot (Pyrenopeziza brassicae) on oilseed rape (Brassica napus). Plant Pathology. 44 (1), pp. 51-62. https://doi.org/10.1111/j.1365-3059.1995.tb02715.x

Seasonal development of apothecia of the cereal eyespot pathogen Tapesia yallundae on straw stubble in the UK

A - Papers appearing in refereed journals

Dyer, P. S., Bateman, G. L., Lucas, J. A. and Peberdy, J. F. 1994. Seasonal development of apothecia of the cereal eyespot pathogen Tapesia yallundae on straw stubble in the UK. Annals of Applied Biology - AAB. 125 (3), pp. 489-500. https://doi.org/10.1111/j.1744-7348.1994.tb04986.x

Effects of previous cropping and fungicide timing on the development of light leaf spot (Pyrenopeziza brassicae ) seed yield and quality of winter oilseed rape (Brassica napus )

A - Papers appearing in refereed journals

Figueroa, L., Shaw, M. W., Fitt, B. D. L., McCartney, H. A. and Welham, S. J. 1994. Effects of previous cropping and fungicide timing on the development of light leaf spot (Pyrenopeziza brassicae ) seed yield and quality of winter oilseed rape (Brassica napus ). Annals of Applied Biology - AAB. 124 (2), pp. 221-239. https://doi.org/10.1111/j.1744-7348.1994.tb04130.x

Methods for detection of early infection by Pyrenopeziza brassicae (light leaf spot) on winter oilseed rape in the UK

C1 - Edited contributions to conferences/learned societies

Figueroa, L., Fitt, B. D. L., Shaw, M. W. and McCartney, H. A. 1993. Methods for detection of early infection by Pyrenopeziza brassicae (light leaf spot) on winter oilseed rape in the UK.

Epidemiology and early detection of light leaf spot (Pyrenopeziza brassicae) on winter oilseed rape in the UK

G - Articles in popular magazines and other technical publications

Figueroa, L., Fitt, B. D. L., Shaw, M. W. and McCartney, H. A. 1992. Epidemiology and early detection of light leaf spot (Pyrenopeziza brassicae) on winter oilseed rape in the UK. GCIRC Bulletin. 8, pp. 72-75.

The host range of isolates of downy mildew, Peronospora parasitica, from brassica crop species

A - Papers appearing in refereed journals

Sherriff, C. and Lucas, J. A. 1990. The host range of isolates of downy mildew, Peronospora parasitica, from brassica crop species. Plant Pathology. 39 (1), pp. 77-91. https://doi.org/10.1111/j.1365-3059.1990.tb02478.x

A model of the evolution of polygenically controlled fungicide resistance

A - Papers appearing in refereed journals

Shaw, M. W. 1989. A model of the evolution of polygenically controlled fungicide resistance. Plant Pathology. 38 (1), pp. 44-55. https://doi.org/10.1111/j.1365-3059.1989.tb01426.x

Airborne inoculum as a major source of septoria-tritici (mycosphaerella-graminicola) infections in winter wheat crops in the uk

A - Papers appearing in refereed journals

Shaw, M. W. and Royle, D. J. 1989. Airborne inoculum as a major source of septoria-tritici (mycosphaerella-graminicola) infections in winter wheat crops in the uk. Plant Pathology. 38 (1), pp. 35-43. https://doi.org/10.1111/j.1365-3059.1989.tb01425.x

The Persistence and Fate of DDT on Foliage. I.—The Influence of Plant Wax on the Toxicity and Persistence of Deposits of DDT Crystals

A - Papers appearing in refereed journals

Burt, Paul Edwin and Ward, J. L. 1955. The Persistence and Fate of DDT on Foliage. I.—The Influence of Plant Wax on the Toxicity and Persistence of Deposits of DDT Crystals. Bulletin of Entomological Research. 46 (1), pp. 39-56. https://doi.org/10.1017/S0007485300030753